Prap009992.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- Usp38
- Assembly
- GCA_905147795.1
- Location
- LR990607.1:1095600-1103002[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.9 5.5e+03 -2.0 0.0 10 24 152 167 144 189 0.47 2 3 0.69 4.2e+02 1.6 0.0 20 49 328 357 314 371 0.75 3 3 5.3e-15 3.3e-12 46.8 0.0 11 89 372 448 367 448 0.90
Sequence Information
- Coding Sequence
- ATGACGGCACTAGTACCGGAACGGGCTGTAGCTGGTCCGTGCAATCTAAAACGGCACTCTAACGTCGATGTCAATACTGTCAATAATACCAAACGGTGGCGTTTTGACGATTCGTTCATTAACAATATATTTGCTGGAGTATTCCTCACCCGTATAACATGCATAACTTGTGGCTATTCTTCACGCTCTAGAGATGTTTGCCGCGATATACAATTGGCGTTCCCAGAGGAATCCGGTGGCAACCAGTACACCATTCATGGGCTGATCGACTTTTATTTCTCTAATGAAATATTAACAGGAGAGAATCAGTACCAGTGCCAAGATTGTAATATTATGCGGGATGCCGAGAAATGTGTCATCATAGAATCTACCCCAAAAATATTGATAATAATTTTGAAACAATGCGGAGATGGCGCTCCCAGAGAACTCAACAACACCTTCTTCGAGGAGATAGAACAAATAATATCGGAAAATGGCTCCATGGAGTTACAAAAGAACCCAGCAACATTAGCATCACCATCAACAAGCACACAGGTGAAACCATCGTACCCGATGTACATTTCACCGATTAACCGCGAGAGGGAAGGAAAAGGACAAGAAACCCTGCTAGTTGAGCAACAAATGTTGAGAAAACTCGTCGAAATACCGGCAAGACTTACGACAGCTCTTTCAAAACGACAAGGAGGCGGTTTCATAGAAGATGACCAGAGGGGTAAACACGAGAAACACTCCACCATAGATAATGAAATAAAAGAAAGTGAGGTGGCTTTCATCAAGTCCATCTCCAGAATAGAATCTCATTACCTTCGAGCACAAACAACGAGAGAGTTCATTCCAAGCGAAAAGTCAATTGCAGATCTTTACCGAGACTATAAAGATCTACGCGAAAATGACCAATTACCATTTGCTTCGTCATCAACATACGATGCAAAACTTCGAGTTCAGACGAAATTAATGCACTCTGTGATGTACAATACATCTGTTAAATTGCCAACTCTGTGCAGCCAGACGGATAATAACTCGTATAATTTGTTCGCTGCTGTAATTCACGCCGGCACCACCATGAATGTTGGCCACTATTATACGTTAGGAAAAGACAATAGTGATTGGTACATATTCGACGATTCCAGGAAAGTGCCATACAAGCGACCACCACCATTTAGCGGCTTGGAAGTTGACTTACCACACTTATACAACCTAGTGCAGCACGTGGGTGGCCTGAAGAAAATAGCAAATCTACCAAAATGGAACAATGTGGCTGAACATTTGGAATGTTGTAGGAATTTAAAAAATCCTGTTCAAAAAATAAAAGAGATTTATGAGAAATATCCAGTCCCATATGAAGTTATCACATCTTTGGAGAAACATAATTTGAAAGAACAAGTTGAGCATTAG
- Protein Sequence
- MTALVPERAVAGPCNLKRHSNVDVNTVNNTKRWRFDDSFINNIFAGVFLTRITCITCGYSSRSRDVCRDIQLAFPEESGGNQYTIHGLIDFYFSNEILTGENQYQCQDCNIMRDAEKCVIIESTPKILIIILKQCGDGAPRELNNTFFEEIEQIISENGSMELQKNPATLASPSTSTQVKPSYPMYISPINREREGKGQETLLVEQQMLRKLVEIPARLTTALSKRQGGGFIEDDQRGKHEKHSTIDNEIKESEVAFIKSISRIESHYLRAQTTREFIPSEKSIADLYRDYKDLRENDQLPFASSSTYDAKLRVQTKLMHSVMYNTSVKLPTLCSQTDNNSYNLFAAVIHAGTTMNVGHYYTLGKDNSDWYIFDDSRKVPYKRPPPFSGLEVDLPHLYNLVQHVGGLKKIANLPKWNNVAEHLECCRNLKNPVQKIKEIYEKYPVPYEVITSLEKHNLKEQVEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -