Prap010093.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- -
- Assembly
- GCA_905147795.1
- Location
- LR990607.1:413956-414887[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-19 4e-16 59.4 0.3 6 89 78 159 74 159 0.91 2 2 2 1.3e+03 0.1 0.0 51 64 194 207 171 215 0.71
Sequence Information
- Coding Sequence
- ATGATGTGGTTCGAGAATATGTTGAATAGATTATTATTGTGTCTTAATCTGATTCCTGGAACCACTAACATAGAGAAAATTTTACCAGAAGCGTCCAAATATGGCTTATGCAAAGTTATACCACCTGATGGATTCACACCACCCTGTAATCTTGATGCGACTATGAACTTTAATGTAACCAACCACTACGTGCAACGGATGTTCAAACGATATGGGCCAGCTGCCAAAAAGTTGAGCACTTTCAAAGCCGTCTTGGCGTCGCAAAAAGTGACATTTAGGCGACCGCCACTACTAAGCGGCTTGGAAGTGGACTTACCATATTTATTCAAGCTAGTACAGCAAATGGGTGGCCTAAAGAAGTTAACAAAAATAGTACAATGGAACAAAGTTGCCGAGCAATTAAAGTGTTGTAATAATTTAAAAAATCCAGGTCAAAAAATTAAACAAATTTATGAAAAATATCTACTAACATATGAAGTGATGACCTCGTTGGAGAATGAAAATTTGAAAGAACAAGTAGAACGTGCGAAAGAAGTCAATCAAGGATGTTTAACCGTGCACGTAGTCCTTTGCAGGCATAAAAGCAAATGCTGGAGCCAGGTGATTCAACAGATAATGATTCGTCTGATGAAATCCCGACAAAAGATCGTTTAG
- Protein Sequence
- MMWFENMLNRLLLCLNLIPGTTNIEKILPEASKYGLCKVIPPDGFTPPCNLDATMNFNVTNHYVQRMFKRYGPAAKKLSTFKAVLASQKVTFRRPPLLSGLEVDLPYLFKLVQQMGGLKKLTKIVQWNKVAEQLKCCNNLKNPGQKIKQIYEKYLLTYEVMTSLENENLKEQVERAKEVNQGCLTVHVVLCRHKSKCWSQVIQQIMIRLMKSRQKIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -