Pnap017828.1
Basic Information
- Insect
- Pieris napi
- Gene Symbol
- nfxl1
- Assembly
- GCA_905475465.1
- Location
- FR997714.1:281085-287345[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 21 0.027 3.3e+02 1.9 0.6 4 10 169 175 168 175 0.96 3 21 3.1e-07 0.0038 17.6 15.9 3 19 186 202 185 202 0.95 4 21 2 2.4e+04 -4.2 0.4 6 10 227 231 227 234 0.49 5 21 5.2e-07 0.0063 16.9 14.8 3 18 239 254 236 255 0.92 6 21 1.3 1.6e+04 -3.5 1.3 6 10 280 284 279 284 0.89 7 21 2.2e-08 0.00027 21.3 12.3 1 19 290 308 290 308 0.99 8 21 2.9e-07 0.0035 17.8 18.9 3 19 345 361 332 361 0.88 9 21 1.2 1.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84 10 21 5.3e-07 0.0065 16.9 16.1 1 18 395 412 395 413 0.97 11 21 2.4e-08 0.00029 21.2 16.9 1 19 422 440 422 440 0.99 12 21 1.3 1.5e+04 -3.5 1.9 5 10 468 473 468 473 0.93 13 21 0.00021 2.5 8.6 6.4 9 19 488 498 486 498 0.89 14 21 0.079 9.6e+02 0.4 7.5 4 12 510 518 508 518 0.90 15 21 0.31 3.8e+03 -1.5 3.5 14 18 547 551 547 552 0.87 16 21 0.56 6.8e+03 -2.3 0.1 8 11 568 571 567 572 0.81 17 21 2 2.4e+04 -5.4 3.6 1 4 578 581 578 582 0.93 18 21 0.0004 4.9 7.7 4.4 1 11 588 598 588 599 0.95 19 21 0.00011 1.3 9.6 16.6 4 18 630 645 628 646 0.82 20 21 1.4 1.7e+04 -3.6 0.9 5 10 663 668 663 668 0.91 21 21 0.00095 12 6.5 11.1 1 16 687 701 687 706 0.92
Sequence Information
- Coding Sequence
- ATGGCACGGAGATATAGGGATGCTGCTGCAAAGCTGCAGCAAAACATACACAAGCACTTAAAAGAAATAAAAGATCTCTCATCATCTGAAGATGAAGAGCCATATGAACCTAGTGTTCTGGAGGGTGTTTTCCAGAGTTACTGGCGAGGCGGTGGTGATACGCACATGACCAACAGGACAAGGAATCTTCTAGAAGAAGCTCTAAGCGGTCGGTCTGTTACTTGTTTAATTTGCATTGGATCTATTAAAAGAGCCGACGCCATCTGGACATGTGACCACTGCCATTCTTACTTCCATCTATCGTGTATTCAAAAATGGGCTAATGATAGCATAAACTTACGTTCCGAAGAAATCCAAGCTCCAATTGTAATTGTCAAGCGAAAAAATATTGAGTGGTGTTGTCCCAAATGTAGGACGACATACAGTAAAGAGGAAATTCCACACAAGTATCGTTGTTTTTGTGGAAAAACAGATGATCCACCATACCACCCTTGGTTAGTGCCTCATACTTGTGGAGAAATATGTGGGCGAAAAATTTCATTTGGTGACAATTGTAAACATAAATGCTTATTACTGTGTCATCCTGGCCCTTGCCCTCCATGCCCTCAAACAATAAACGGAATATGTTACTGTGGAAATGAACAGAAAAGAGTTAGATGCAGTGCACCTAAATGGTCTTGTGGTGAAACATGTAGTAAATTACTTCCATGCAGGTCTCATAAGTGTGAAAATATTTGTCATGAAGGTGATTGTTCGCCTTGTCATTACACTAGTCTACAGCATTGTCTCTGTGGCGCAGAAAAAGCAAAACGACCATGTACTGATCTGATCTGGCAGTGTTCTAAAGTTTGCAACAAAAAATATTCATGTGGGTTTCATAATTGTTTGGATACATGTCACTCTGGGTCCTGTGGCCCTTGCCCAAATTCTGGCCTCAGGACTTGTCCTTGTGGAGCTATTAAACGGCATGTACAATGTCCAGATTCTATAGAAACATGTCTTAGTACCTGTGGGAAAAGGCAAGAGGGTTGTGAACATACTTGTCCTGAAAAATGTCATAAGGGACCATGTCCACCATGTCAAGTGATGGTTGAAAAAAAATGTCATTGCTCTACACATGCACGATCATTGCCATGTAGCAAAGACTTTAGATGTGACACCAAATGCAGAGGTATTAGACCTTGTGGAAAGCATGTTTGTGCTCGTAAATGTTGTAGTGGTAACTGTCCTCCTTGTGAAAAACTTTGTGATAAACCATTGCAATGTGGGCGTCACAAATGCACAACAATTTGTCATCATGGGCCTTGTTATCCTTGTCCAAGGGAATCAAAAATTATGTGCCGTTGTAAAGAAACATTTATCACAGTACCGTGTGGCAGAGAAAAATATGTAAAGCCCCCTAAATGTAATCAAAAATGTAATATAAAATATAAGTGTGGGCATATTGAAGAAAACAAACATTCCTGCCATTTTGGGGACTGTCCTCCTTGTAAAGCTGTGTGTAACAAATCTTATGAGAAATGTGATCATAAATGCAAGGCCCAATGTCATGAATATGTTATTGTTGTATTTAAGCAAGTTGAGAAACCAGCAACACCTTGGGAAGTTCAGCCTCCAAAGACAAAAGTTGTAGCTTTGGATTGCCCACCTTGTGAGGCTCCTGTAACAGTTATATGTTTCGGAGAACATGATTCTGAAATGCAGCCCTGCCACTTAGCATCACGTCGCTGCTGTGGGCGGCACTGCAACAAAGACCTGGATTGTACCAACCATAAGTGTTCACTACTATGTCACTTATATAGCCCTGATTCTAACTATCCAAATGTGCCTTCCTCATGTAGACAATGTGATAGGGAGTGTTCTGTGCCTAGACCAGCAGAATGTGCTCATAAATGTCCTAAACGTGCTTGTCATCCTGGACCTTGTCCACCTTGTGAGGTATTAGAAAGAATTAAATGCTTTTGTGCTGTTACAGAGATATATTTACGTTGCCGAGAGCTATGTGCAGCAAATGATGAAACATTAAGCTGCAAACAACAATGCCCTAAGAATTTAGCATGTGGACATAGGTGTAAAAAATCCTGTCACAGAGATAGCTGTGGAGAGAATCAAATCTGTATGAAAAAAACGAAAATACACTGTTCTTGTGGTAATTTGAAGAAAGAAGCATCTTGTAATTTGGTGCGATCATCTGAAATTAAAGTTGACTGTGACAGTACTTGTGAAGCAAAGAAGTTGGCAGTTAAATGTGAGAAAGAAAAAGAAGAAAAACGATTGAAAGAGTTAGAAGAGGAAAGAAATCGCAAAGAACTTGCAGAATATGAATGGAAACTGAGCGGAAAAAAGAAACAACACAGAGAAAAGAAAATGATTATCAATGAAGACAATAGAAATTATGTACAAAAATACTGGGTTCCTATTTTAACTATTGTAATTGTAATTTTGTCAGGAGTTCTATATATTATAAATTTTTCAGGGGTGTAA
- Protein Sequence
- MARRYRDAAAKLQQNIHKHLKEIKDLSSSEDEEPYEPSVLEGVFQSYWRGGGDTHMTNRTRNLLEEALSGRSVTCLICIGSIKRADAIWTCDHCHSYFHLSCIQKWANDSINLRSEEIQAPIVIVKRKNIEWCCPKCRTTYSKEEIPHKYRCFCGKTDDPPYHPWLVPHTCGEICGRKISFGDNCKHKCLLLCHPGPCPPCPQTINGICYCGNEQKRVRCSAPKWSCGETCSKLLPCRSHKCENICHEGDCSPCHYTSLQHCLCGAEKAKRPCTDLIWQCSKVCNKKYSCGFHNCLDTCHSGSCGPCPNSGLRTCPCGAIKRHVQCPDSIETCLSTCGKRQEGCEHTCPEKCHKGPCPPCQVMVEKKCHCSTHARSLPCSKDFRCDTKCRGIRPCGKHVCARKCCSGNCPPCEKLCDKPLQCGRHKCTTICHHGPCYPCPRESKIMCRCKETFITVPCGREKYVKPPKCNQKCNIKYKCGHIEENKHSCHFGDCPPCKAVCNKSYEKCDHKCKAQCHEYVIVVFKQVEKPATPWEVQPPKTKVVALDCPPCEAPVTVICFGEHDSEMQPCHLASRRCCGRHCNKDLDCTNHKCSLLCHLYSPDSNYPNVPSSCRQCDRECSVPRPAECAHKCPKRACHPGPCPPCEVLERIKCFCAVTEIYLRCRELCAANDETLSCKQQCPKNLACGHRCKKSCHRDSCGENQICMKKTKIHCSCGNLKKEASCNLVRSSEIKVDCDSTCEAKKLAVKCEKEKEEKRLKELEEERNRKELAEYEWKLSGKKKQHREKKMIINEDNRNYVQKYWVPILTIVIVILSGVLYIINFSGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01204545;
- 90% Identity
- iTF_01204545;
- 80% Identity
- -