Pnap004260.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pieris napi
Gene Symbol
ct
Assembly
GCA_905475465.1
Location
FR997705.1:1012021-1017631[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-32 2.4e-28 98.4 0.0 4 77 331 405 329 407 0.96
2 2 5.4e-31 4.4e-27 94.3 0.0 3 75 525 598 523 602 0.95

Sequence Information

Coding Sequence
ATGCAATTAAGTCTTTGTACACTGAAAATTAATACGTCTCCGTTAGGAACGAAAGATGGCACAGCAGGTGCTGGTTTCGGGAGATCAGATGGTGAAGGTGACGAAAGGCTGGCACATATCCTTACAGAGGCATCCCACATGATTAAAACTCCAACCGGACTGCCCAATAATGATGACTCCAGCACACTGATGAGCAACGAAGACTCCAGTTCGCCACGAACTCAGTGCCCTTCGCCATTCTCTAATAAGGATTCAAGTCAAAACAGAAGGCTGAAGAAATACGAAAACGACGACATTCCTCAAGAGAAAGTAGTCCGCATTTACCAAGAAGAACTCGCCAAGATTATGACGAGGAGAGGAGAGGATATGCGGCACAACCGAGAAGGGTTCCCTGGAATGTTTCCTCCTTTTTTTAGCGGTGGCATGCCACCTCAGATAGAGCGGCCCCCCGAAGACATCCGCATGGCTCTCGAAGCCTATCACCGAGAACTCGCCAAGATCCAGGGAGGAAACATTCCCATCCACAACCTTCCAGGAATACCTCCCTTCCCGAACCTCATAGCCCTCCAGCAATTGCAGGCCCAGACGCACATCAACGGATCCGGTGCCGTCCAGGACCTGTCGCTGCCTAAAGACAAAAATGCCAAAATTAATGGAATGACTGATAGTGATAAGGATAAGATGGATGCAGAGGAGGCAATAAGGCACGCAGGAAGCGCCTTCTCCCTAGTTAGACCTAAATTAGAACCGGGGCAACAGTCCACTGGCTCTTCGGCGTCCAGCCCGCTCGGCAACGCCATACTTCCACCCGCGATAACCCCCAACGAAGACTTCAACAGCTCGGCGGCAGCTAGTCCTCTGCAGAGGATGGCTTCCATCACAAACAGCCTGATCTCGCAACCCCCGAACCCCCCGCACCATGTGCCTCCCCAGCGGTCTATGAAAGCGGTTCTGCCCCCGATCACGCAGCAGCAGTTCGATCTCTTCAACAACCTAAACACTGAAGATATAGTGAAAAGAGTGAAGGAGGCGTTGAGCCAATACTCCATAAGCCAAAGGCTGTTCGGGGAGTCCGTCTTGGGGCTGTCGCAAGGCTCGGTCAGTGACCTGTTGGCGCGGCCGAAGCCCTGGCACATGTTGACTCAAAAGGGACGAGAGCCTTTCATCCGAATGAAGATGTTCTTGGAGGATGACAACGCGGTACACAAGCTAGTTGCGTCGCAGTACAAGATCGCACCGGAAAAGCTCATGAGGACTGGAAACTATAGCGGAGCACCCGTCTGTCCGCCGAACATGAGCAAGCCGATGCCGCCAACCCAGAAGATGATCTCTGACGCGACTTCCCTTCTGAGCAAGATGCAACATGAGCAGCTACTGGGACCCCACATGCCCCATCTACCCCCGGGACCTCTTCTGCTGACACCCCCCGGCTTTCCTCCACACCATGCCGTGACGTTGCCCCCGCAGCACCACGAAAACAAGGAGAGGAAGCCTCCACCGCCGCCCCAGCACCAGATGAGGGCGCTGCACCAGCACATGTCACCCAGCGTGTACGAGATGGCGGCTCTCACACAGGACCTTGACACGCAAACTATCACCACGAAGATCAAAGAGGCCCTCCTCGCCAACAACATTGGCCAGAAAATCTTTGGCGAAGCGGTGTTAGGTCTCTCCCAAGGATCCGTCAGCGAACTCCTATCTAAACCGAAGCCTTGGCACATGCTGAGTATAAAGGGGCGGGAACCCTTCATCAGGATGCAGCTATGGCTCAGCGATGCACACAATATCGATAGACTGCAAGCCTTAAAGAACGAGAGACGAGAAGCCAACAAGAGAAGACGGTCGAGTGGGCCAGGACAAGACAACTCCTCGGACACGTCTTCTAATGACACGTCGGAGTTTTATCACTCCAGCTCTCCAGGTCCGACGTCGGGCGTTCCCTCCGCGAAGAAACAACGCGTCCTGTTCTCTGAAGAACAGAAGGAAGCTTTGAGGCTCGCGTTCGCTCTCGATCCTTACCCCAACATGCCGACGATAGAGTTTCTGGCGGCAGAGTTGGGACTCTCCACTAGAACGATTACGAATTGGTTCCACAATCATCGAATGCGCTTAAAGCAACAGGCGCCCCACGGTCTTCCAGCGGAGCCCCCGGCGAGAGATCAGTCTTCCGCGCCCTTCGATCCGGTACAATTTAGGCTCCTTCTGAACCAGAGACTGCTCGAGCTCCAGAAGGAGAGGATGGGTCTGGCTGGAGTTCCCCTTCCGTATCCTCCGTACTTCGCGGCGAATTCAAACTTTGCAGCGTTAATCGGGAGAGGTCTGTTACCGCCCGAGGACCACAAGAACCCGGCGAGCGGTCTCGACTTGTCAATGCCGCTCAAACGCGAACCGGACGCGGACGACTTCGAAGACGACGACCTCGAGAGCAATCTGGGTTCGGAGGACTCTCTAGACGACGAGTCGAAAAACGAGCCAAAGGCGACGTCGACCCCGGCGCGGTCGAGTCGGAGGAAGCCTGCCGCGCCGCAGTGGGTCAACCCCGACTGGCAAGACGAGAAGCCCCGGAACCCGGACGAAGTCATCATCAACGGTGTCTGCGTCATGCGCAGCGACGACTTCAGACGGGAGGCGGAGGAGACGGTCCGCATAGAGCCTTCGCCTGCCCCCAGAGAGAACACGTCCCCCACCCTCGCCCCGGCCCCCTCGCCCCTCACGAGGGAGTCCCCGGAGGTGCTTGCGGAGGACAAGATAAAAACTGAAACAGAGGACGATCGGTGGGAGTACTAG
Protein Sequence
MQLSLCTLKINTSPLGTKDGTAGAGFGRSDGEGDERLAHILTEASHMIKTPTGLPNNDDSSTLMSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRGEDMRHNREGFPGMFPPFFSGGMPPQIERPPEDIRMALEAYHRELAKIQGGNIPIHNLPGIPPFPNLIALQQLQAQTHINGSGAVQDLSLPKDKNAKINGMTDSDKDKMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFNSSAAASPLQRMASITNSLISQPPNPPHHVPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPVCPPNMSKPMPPTQKMISDATSLLSKMQHEQLLGPHMPHLPPGPLLLTPPGFPPHHAVTLPPQHHENKERKPPPPPQHQMRALHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLPPEDHKNPASGLDLSMPLKREPDADDFEDDDLESNLGSEDSLDDESKNEPKATSTPARSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRIEPSPAPRENTSPTLAPAPSPLTRESPEVLAEDKIKTETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01202369;
90% Identity
iTF_00878768;
80% Identity
iTF_01205600;