Pmel004366.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pieris melete
Gene Symbol
nfxl1
Assembly
GCA_963693345.1
Location
CAVNZK010000013.1:158086-160569[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 3 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 21 0.041 4.1e+02 1.9 0.6 4 10 169 175 168 175 0.96
3 21 4.7e-07 0.0047 17.6 15.9 3 19 186 202 185 202 0.95
4 21 3 3e+04 -4.2 0.4 6 10 227 231 227 234 0.49
5 21 7.8e-07 0.0077 16.9 14.8 3 18 239 254 236 255 0.92
6 21 2.9 2.9e+04 -4.1 1.6 6 10 280 284 279 284 0.89
7 21 3.3e-08 0.00033 21.3 12.3 1 19 290 308 290 308 0.99
8 21 4.3e-07 0.0043 17.8 18.9 3 19 345 361 332 361 0.88
9 21 1.9 1.9e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 21 8e-07 0.008 16.9 16.1 1 18 395 412 395 413 0.97
11 21 3.5e-08 0.00035 21.2 16.9 1 19 422 440 422 440 0.99
12 21 1.9 1.9e+04 -3.5 1.9 5 10 468 473 468 473 0.93
13 21 0.00031 3.1 8.6 6.4 9 19 488 498 486 498 0.89
14 21 0.12 1.2e+03 0.4 7.5 4 12 510 518 508 518 0.90
15 21 0.47 4.7e+03 -1.5 3.5 14 18 547 551 547 552 0.87
16 21 1.3 1.3e+04 -3.0 0.3 8 11 568 571 568 572 0.78
17 21 3 3e+04 -5.4 3.6 1 4 578 581 578 582 0.93
18 21 0.0015 15 6.4 3.9 1 11 588 598 588 599 0.95
19 21 0.00016 1.6 9.6 16.6 4 18 630 645 628 646 0.82
20 21 2.1 2.1e+04 -3.6 0.9 5 10 663 668 663 668 0.91
21 21 0.0015 15 6.4 11.1 1 16 687 701 687 706 0.92

Sequence Information

Coding Sequence
ATGGCACGGAGATATCGGGATGCTGCTGCAAAGCTGCAGCAAAACATACACAAGcacttaaaagaaataaaagatcTCTCATCATCTGAGGATGAAGAGCCATATGAACCTAGTGTTCTGGAGGGTGTTTTCCAGAGTTACTGGCGAGGCGGTGGTGATACGCACATGACCAACAGGACAAGGAATCTTCTAGAAGAAGCTCTAAGCGGTCGGTCTGTTACTTGTTTAATTTGCATTGGATCTATTAAAAGAGCTGACGCTATCTGGACATGTGACCACTGCCATTCTTACTTCCATCTTTCGTGTATTCAAAAATGGGCTAATGATAGCATAAACTTACGTTCCGAAGAAATCCAAGCTCCAATTGTAATTGTCAAGCGAAAAAATATTGAGTGGTGTTGTCCCAAATGTAGGACGACATACAGTAAAGAGGAAATTCCACACAAGTATCGTTGTTTTTGTGGAAAAACAGATGATCCACCATACCACCCTTGGTTAGTGCCTCATACTTGTGGAGAAATATGTGGGCGAAAGATTTCATTTGGTGACAATTGTAAACATAAATGCTTATTACTGTGTCATCCTGGCCCATGCCCTCCATGCCCTCAAACAATAAACGGAATATGTTACTGTGGAAATGAACAGAAAAGAGTTAGATGCAGTGCACCTAAATGGTCTTGTGGTGAAACATGTAGTAAATTACTTCCTTGCAGGTCTCATAAGTGTGAAAACATTTGTCATGAAGGTGATTGTTCGCCTTGTCATTACACCAGTCTACAGCGTTGTCTCTGTGGTGCAGAAAAAGCAAAACGACCATGTACTGATCTGATCTGGCAGTGTACTAAAGTttgcaacaaaaaatattcatgtGGGTTTCATAATTGTTTGGATACATGTCACTCTGGGTCCTGTGGCCCTTGCCCAAATTCTGGCCTCAGGACTTGTCCTTGTGGAGCTATTAAACAGCATGTACAATGTCCAGATTCTATAGAAACATGTCTTAGTACCTGTGGGAAAAGGCAAGAGGGTTGTGAACATACTTGTCCTGAAAAATGTCATAAGGGACCATGTCCACCATGTCAAGTGATGGTTGAAAAAAAATGCCATTGCTCTACACATGCACGATCATTGCCATGTAGCAAAGACTTTAGATGTGACACCAAATGCAGAGGTATTAGACCTTGTGGAAAGCATGTTTGTGCTCGTAAATGTTGTAGTGGTAACTGTCCTCCTTGTGAAAAACTTTGTGATAAACCATTGCAATGTGGCCGTCACAAATGCACAACAATTTGTCATCATGGGCCTTGTTATCCTTGTCCAAGGGAATCAAAAATTACGTGCCGTTGTAAAGAAACATTTATCACAGTACCATGTGGCAgagaaaaatatgtaaagcCCCCTAAATGTaatcaaaaatgtaatattaaatataagtgtGGGCATATTGAAGAAAACAAACATTCCTGCCATTTTGGTGACTGTCCTCCTTGTAAAGCTGTGTGTAACAAATCTTATGAGAAATGTGATCATAAATGCAAGGCCCAATGTCATGAATATGTCATTGTTGTATTTAAGCAAGTTGAAAAACCAGCAACACCTTGGGAAGTTCAGCCCCCAAAGACAAAAGTTGTAGCTTTGGATTGCCCACCTTGTGAGGCTCCTGTAACAGTTATATGTTTTGGAGAACATGATTCTGAACTGCAGCCCTGCCACTTAGCATCACGCTGCTGCTGTGGGCGGCACTGCAACAAAGACCTGGATTGTACCAACCATAAGTGTTTACTACTATGTCACTTATATAGCCCTGATTCTAACTATCCAAATGTGCCTTCCTCGTGTAGACAATGTGATAGGGAGTGTTCTGTGCCTAGACCAGCAGAATGTGCTCATAAATGTCCTAAACGTGCTTGTCATCCTGGACCTTGTCCACCTTGTGAGGTATTAGAAAGAATTAAATGCTTTTGTGCTGTTACAGAGATATATTTACGTTGTCGAGAGCTATGTGCAGCAAATGATGAAACATTAAGCTGCAAGCAACAATGCCCTAAGAATTTGGCATGTGGACATAGGTGTAAAAAATCCTGTCACAGAAATAGCTGTGGAGAGAATCAAATCTGTATGAAAAAAACGAAAATACACTGTTCTTGTGGTAATTTGAAGAAAGAAGCATCTTGTAATTTGGTGCGATCATCTGAAATTAAAGTTGACTGTGACAGTACTTGTGAAGCAAAGAAGTTGGCAGTTAAATGTgagaaagaaaaagaagaaaaacgaTTGAAAGAGTTAGAAGAGGAAAGAAATCGCAAAGAACTTGCAGAATATGAATGGAAACTGAGcggaaaaaagaaaaaacacagAGAAAAGAAAATGATTATCAATGAAGACAATAGaaattttgtacaaaaatacTGGGTTCCTATTTTAActattgtaattgtaattttgtCAGGagttctatatattataaacttttcaGGGGtgtaa
Protein Sequence
MARRYRDAAAKLQQNIHKHLKEIKDLSSSEDEEPYEPSVLEGVFQSYWRGGGDTHMTNRTRNLLEEALSGRSVTCLICIGSIKRADAIWTCDHCHSYFHLSCIQKWANDSINLRSEEIQAPIVIVKRKNIEWCCPKCRTTYSKEEIPHKYRCFCGKTDDPPYHPWLVPHTCGEICGRKISFGDNCKHKCLLLCHPGPCPPCPQTINGICYCGNEQKRVRCSAPKWSCGETCSKLLPCRSHKCENICHEGDCSPCHYTSLQRCLCGAEKAKRPCTDLIWQCTKVCNKKYSCGFHNCLDTCHSGSCGPCPNSGLRTCPCGAIKQHVQCPDSIETCLSTCGKRQEGCEHTCPEKCHKGPCPPCQVMVEKKCHCSTHARSLPCSKDFRCDTKCRGIRPCGKHVCARKCCSGNCPPCEKLCDKPLQCGRHKCTTICHHGPCYPCPRESKITCRCKETFITVPCGREKYVKPPKCNQKCNIKYKCGHIEENKHSCHFGDCPPCKAVCNKSYEKCDHKCKAQCHEYVIVVFKQVEKPATPWEVQPPKTKVVALDCPPCEAPVTVICFGEHDSELQPCHLASRCCCGRHCNKDLDCTNHKCLLLCHLYSPDSNYPNVPSSCRQCDRECSVPRPAECAHKCPKRACHPGPCPPCEVLERIKCFCAVTEIYLRCRELCAANDETLSCKQQCPKNLACGHRCKKSCHRNSCGENQICMKKTKIHCSCGNLKKEASCNLVRSSEIKVDCDSTCEAKKLAVKCEKEKEEKRLKELEEERNRKELAEYEWKLSGKKKKHREKKMIINEDNRNFVQKYWVPILTIVIVILSGVLYIINFSGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01204545;
90% Identity
iTF_01204545;
80% Identity
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