Basic Information

Insect: Pieris mannii
Gene Symbol: -
Assembly: GCA_029001895.1
Location: CM054851.1:1089623-1097855[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-09 1.6e-06 28.3 0.0 2 40 17 54 16 57 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-09	1.6e-06	28.3	0.0	2	40	17	54	16	57	0.84

Sequence Information

Coding Sequence: atgGTGCGgaattatgttaaaaagaaGGATACAGGACCCAAATATACCGACGAAAAACTAAACATTGCTCTTAATGATATGTCTGGTGTACTCACTACTCATAAAGCTGCTGTTATTTACGGTATTCCATTTGCGACGTTATATTCTCGAGTGAAAGGAACACGAggtgcaattaaaaaaactaaagggcGCAGAACGGCACTTCCAGAAACTGTTGAACATGTTTTGGCCACTTCTATAAAAACGCTTGCTAAATGGGGCTTTGTTCTTAGTCGCAAAGAAATTTTAGAGTTAGTTGGTCAATTCGTTAGAGGCAATAAAATTGAAACACCATTTAAAGATGACATACCAGGGGAAGATTGGTTCCTTGGTTTCAAAAGACGACATAATTTATCTATTCGAAAGCCTGAACAATTGGAATATGCTAGAAAAAAGGCCGCCACAGATCCATTCATAATTTATGGGTATTTCAGTCTTTTGAAAAAAACTTTAGTTGATTTAAACTTAGAAAGCAAACCTCAACAGATCTGGAATTTAGACGAAAGCAGTTTAAGTCTAGATCCAACAAATTCCAGAGTTGTCGGAAAAAAAGGCGAAATGCCTAAACCGGCTGGAAATAATGTTGAATGGACAAAGAATGATGGCATGGCcatgtttattataacatcTTCGATGGACTTCaaacaaataactttaatagaaaattgtgAAACTGCTAAGGAAATAATGACAAAACTTGAATCAATATACGAACAGAAGAGtgaattatgtaaaatgttgATCCATGAAAAGTTTTACCAGTATAAAATGTCTACAAATGACAGTGTAGCTCAACACATTTCTAAAGTGGAATCATTGGCCAAGCAGTTAAAAGAAAGTGGCGAAAGTATTAGTGAAATGGCTgtgataacaaaaatacttgGAACACTGCCTCATAAGTATAGATCACTCCGTCAAGCGTGGATGTCTTTGGATCCAGAGCAACAGACTCTTGTCAATCTCACTGCTCGTTTGTTAGATGAAGAAGCTAGTTTACAGTGTGAAGAACAACAAGAAACCGCTCTTCTTGTGGCTAAGAAAGGATGGAAAAATAGCCCAAAACAAAGTGAGCTGAATAGAAATGCtagtaattcaaatcaaaataaaaacagtaaacaCAGATTTGAATGTTATAATTGTGGGAAACGAGGACATTTTTCTCGAGAATGTCGTGCTCCAAAGAAATCCAAGTATAGAAAACCTCAACAGGAAGGTGCAGACTTGTTAGCGTTTAATGTAGAAACCAAATTCCATGAAGCTGAAGACAATGTGTGGATTTTAGACAGTGGTTCTTCTGCACATATGACCTATAGAAAGGAGTTCTTTGTAGAACTATTGGAATGTAACCAGAAATCATTGACATTAGGAAACAAACAATCAGTGGAAGTGGCTGGCATTGGCAAGGTGTTAATAAAGAGATGTGTCAATGGACAGTGGGAGAACAGTGAACTACATGATGTATTGTATGTTCCGAATTTGCGACCAAATCTGTTCTCAGAAGGTGTGATAATGCGTAAATCCTATATCATTATCAAGAAAGACTCTGGTGCATTCATTTACAAAGACAATGACTTGGTAATGTGTGCaacaataacagaaaataatttatacaaattgaaaattaaagctGTGGTCTCAGATACCTGTAACTTAGTTCAAAGTgatcaaaataacattaaaatgtggCATGAAAGACTGGGACATGTTAACCTAAAACAAATCAAGAGTATGAGTGCTGATAATGTGGTAGAAGGCTTGAAACTGAATAACagtgataaaactgattttgTTTGTGAAGCATGTGCATATGGAAAGCAGTGCAGATTTCCATTTCACAAATCTATACGAGGAGAACTACAGCCAGGTGACCTTGTATATAGTGATGTCTGTGGACCTATGAGTCATACATCTATCCAAGGTATGagatactttatattatttaaggatGCTGCTACAAGTTACAGGCATGTATATTTTGTCAAACATAAAAGTGATGTGATGGACATATTCATGAAATACAATGCTATGATCAAAAATAAGTACATGCATAGTGTCAGAATATTGCATACTGATAATGGAAGAGAGTATGTGAATAAAACCTTCAATGACTATCTCAGCAAAGAAGGTATAATTCATGAGTGTACTGCGCCATATACACCAGAACAAAATGGGCGTGCTGAAAGAGAGAACCGTACCATTGTGGAGAGCGCACGTTCAATGTTGTACGCGAGGGATGTGTCACTGGAATTATGGGCTGAGGCTGTGAATTGtgcagtatatttattaaaccgGACTTCCTCCAGTCAAACTCCTAAGAAAACACCATTTGAATTATGGAACGGCATCAAACCTCATATAGGCCATGTGAAGGTGTTTGGAAGTATTGGATATGTCCATATTCCTAATCAGCTAAGAACTAAACTTGACAAAAAGAGTGAGAAAATGATACTAATTGGGTAtgataataacaattacaGGCTGTTCAATCCAGAAACcaaaaaggttaaaatatcaagaaatgtaatttttgaaGAACATAATGTTCCAGAGATAAAGAAgaatattacacaaatatacattgaCGATGAAGTGAAGACATTAGGACAACAAAATCAAATGCAAGAAACAAATGTAGAGGATACTCTTGTGGAAACTTCATCATCAGAGAATGAAGATAGCATGTTGAGTTGTAATAGTAATGACTCTACATATGAACCTTTTCAAGAATTAGATGATGATTTAATTCAAAGCAACATAAATTTGAGACCAAGGATTAATAGACGTTTTGAAGCAAACCTAATTGAACTGTCACTGCCACAAACGTATGCTGAAGCGATGAAAAGTCCACAAAGAAACGACTGGTTGAAAGCTTTTGATGAAGAATTGCTTGCACATGAAGAGAATAATACTTGGACTCCAGTAGAGAGGTCTGGTCAACGTACGCTTACTACAAAGTGGGTTTTTGCTATAAAAAAGGATGAAAATGATCAGGGAATGGACGAAGGAGAACAAGTTGATGCTATCTATACGGACTTCGAAAAAGCTTTCGATCGGGTCGATCATGTCATTCTCCTCCATAAGTTATTAGCGCTAGGAATTCGTGGAGATCTATACAGATGGATCAAATCATATGTAACCAATAGAAGGCAGGCGGTAGTAACGGGGGGGCATAAGAgcacatttataaatgtgacatcTAGTGTACCTCAAGGGTCCATACTGGGGATATACCCGTTTAATGCTCACGTTATCCCTAGAGCAAATTTTTCTAAAGAGGCTCTAGAGCGCTGGGAAAAACACGaagaacaaattcaaattactaCTACTGCTCAGGATACAACATTTGTAGAACATGTTGAATGTGCAGAACATGATGTCAATGCCCCGTCCCCATCAATTTTATCAGCTTTGAAAGAGGTCCCACTTATAACTAGCAACTTGGAAAGCCAACCACATTTTACATCACCAACATTAGATCCTAAAGACAAAATAACTTCTAAAGCTCAAAACGTAACAGTAACATCATTAGAACAGATGATTCTCGCAACTATTCAGCAAAAACATCCgccaaataaacaaaaaaagcgaAAAGTTGCTTCAGGCGCAGAAGTTATGACGTCTGCTGAAATGCTTACCGAGTTGAGAAACAAAGAAACTattaaaactaacaaaaaacaaacaggatttaataaaaaaccaaacaaGAAAAGAAAGGGAAAGAATAAGACTCGAAATTTGGATGAAAGTAGTAGTACTGATGCAGGTTCAGAAAATGAAATAACGTTCGAagatcaaaaaaaattaaatgtgaaCAAAAAGCGCAAGAAAAAGATCCAGTGTATAGACAGTAATAGTAGTGGTACTGATGCAGGTTTAGAAGACGAAGTACCATATGATAATTCAGATGAAAGAATGCGGATGGAACAAGAAAATGAGTCTAATAAGGAAAAAAGTATCCCTGAAATTGACAGCCTAATTGGGGAAGAAGATAAAGAGAATGAGGTTGAAGAAGCACAATCACAcggtataaatataaacaaatgggtaattgtaaaatatgcaTTAATAAAGGGACTTAAGTATTATGTGGGTGTTGTGCAAAAAAAAGTAGGCCATCGTTGGGTGGTAAAATTTGTACGATGCAAGGGCGCAACCTTTGCATGGCCTATTATAGAAGATACTGATGAGGTTACTGCTGATTGTATCGTCAAAATATTGCCTAATCCTGAAATAACCAAGCGCggcataatatattttgattacaaatttagaaatatgATTATATCTTAA
Protein Sequence: MVRNYVKKKDTGPKYTDEKLNIALNDMSGVLTTHKAAVIYGIPFATLYSRVKGTRGAIKKTKGRRTALPETVEHVLATSIKTLAKWGFVLSRKEILELVGQFVRGNKIETPFKDDIPGEDWFLGFKRRHNLSIRKPEQLEYARKKAATDPFIIYGYFSLLKKTLVDLNLESKPQQIWNLDESSLSLDPTNSRVVGKKGEMPKPAGNNVEWTKNDGMAMFIITSSMDFKQITLIENCETAKEIMTKLESIYEQKSELCKMLIHEKFYQYKMSTNDSVAQHISKVESLAKQLKESGESISEMAVITKILGTLPHKYRSLRQAWMSLDPEQQTLVNLTARLLDEEASLQCEEQQETALLVAKKGWKNSPKQSELNRNASNSNQNKNSKHRFECYNCGKRGHFSRECRAPKKSKYRKPQQEGADLLAFNVETKFHEAEDNVWILDSGSSAHMTYRKEFFVELLECNQKSLTLGNKQSVEVAGIGKVLIKRCVNGQWENSELHDVLYVPNLRPNLFSEGVIMRKSYIIIKKDSGAFIYKDNDLVMCATITENNLYKLKIKAVVSDTCNLVQSDQNNIKMWHERLGHVNLKQIKSMSADNVVEGLKLNNSDKTDFVCEACAYGKQCRFPFHKSIRGELQPGDLVYSDVCGPMSHTSIQGMRYFILFKDAATSYRHVYFVKHKSDVMDIFMKYNAMIKNKYMHSVRILHTDNGREYVNKTFNDYLSKEGIIHECTAPYTPEQNGRAERENRTIVESARSMLYARDVSLELWAEAVNCAVYLLNRTSSSQTPKKTPFELWNGIKPHIGHVKVFGSIGYVHIPNQLRTKLDKKSEKMILIGYDNNNYRLFNPETKKVKISRNVIFEEHNVPEIKKNITQIYIDDEVKTLGQQNQMQETNVEDTLVETSSSENEDSMLSCNSNDSTYEPFQELDDDLIQSNINLRPRINRRFEANLIELSLPQTYAEAMKSPQRNDWLKAFDEELLAHEENNTWTPVERSGQRTLTTKWVFAIKKDENDQGMDEGEQVDAIYTDFEKAFDRVDHVILLHKLLALGIRGDLYRWIKSYVTNRRQAVVTGGHKSTFINVTSSVPQGSILGIYPFNAHVIPRANFSKEALERWEKHEEQIQITTTAQDTTFVEHVECAEHDVNAPSPSILSALKEVPLITSNLESQPHFTSPTLDPKDKITSKAQNVTVTSLEQMILATIQQKHPPNKQKKRKVASGAEVMTSAEMLTELRNKETIKTNKKQTGFNKKPNKKRKGKNKTRNLDESSSTDAGSENEITFEDQKKLNVNKKRKKKIQCIDSNSSGTDAGLEDEVPYDNSDERMRMEQENESNKEKSIPEIDSLIGEEDKENEVEEAQSHGININKWVIVKYALIKGLKYYVGVVQKKVGHRWVVKFVRCKGATFAWPIIEDTDEVTADCIVKILPNPEITKRGIIYFDYKFRNMIIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -