Pman014691.1
Basic Information
- Insect
- Pieris mannii
- Gene Symbol
- -
- Assembly
- GCA_029001895.1
- Location
- CM054841.1:12004002-12004304[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-12 3.2e-09 37.0 0.0 3 35 13 46 11 52 0.91
Sequence Information
- Coding Sequence
- atggaAGAGAAGACAAAGAAAGGATCCTGGGAGCCACAGAGCTTACAAACTGCTATTGATAAGGTTATGTCAAAAGAACTGAGTGTAAGACAAGCTGCAATGCAATACAATATTCCTAAAAGCACTATACATGATAAAATAATGGCCCTACATCAAGGAGAAGAAGTAACAATGAAACCAAAGTTAGGTAGATTCACTAGCACCTTCTCAGCAGAGTATGAACAAGTCTTTGTGGATCACATTAAAGATTTATCGAATAGATGCCTGCCGCTCATGAAAAAGGACTTTCTAAAATTAGCATAA
- Protein Sequence
- MEEKTKKGSWEPQSLQTAIDKVMSKELSVRQAAMQYNIPKSTIHDKIMALHQGEEVTMKPKLGRFTSTFSAEYEQVFVDHIKDLSNRCLPLMKKDFLKLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156225; iTF_00819082; iTF_01564586; iTF_00354006;
- 90% Identity
- iTF_00819082;
- 80% Identity
- -