Pman021146.1
Basic Information
- Insect
- Pieris mannii
- Gene Symbol
- arid5b
- Assembly
- GCA_029001895.1
- Location
- CM054850.1:5897440-5907175[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-09 3.7e-06 27.8 0.2 3 89 232 304 230 304 0.86
Sequence Information
- Coding Sequence
- ATGTTTTTAAAGTCAGGTTTCATAATTAACAAGTACCTAATAACGAAGGACGAGGTCCTAGCGATAAATGAAAAGGTGGTGCTTCGGGCTGAGGACCTACTCTCCTGGGTCTGTGATGGAGGAGGCTGGAGGTGGGGCATCCGGGCCGTTTGGAAGGAGGCTTGTGCCCCTCCTGCTGAGAATAAGCTGACCTCCCCCCTTCACCTTACAAAGCTCGATTTCAGCGATGTGGAGAAGGAGAAAAGTACTATGTCCCTGGATGCAGACAGTCCCGGTGTGGTGGTGTTCTCGTACCCTCGTTACTGCAGATACAGAGCGATTCTTGCCCGTTTAGAGGGTATCCAAGCCGACTGGTTGAGAGACTCTCTGGTTGCCGCTTTGGGAGGGTATGCGGCACCCACAAATAACACTAggatattgtattgtaagGACACCTTCGAATATCCAGAACTCGAAGGTCACGAATTCGTGTGTAACCACCTAGCGCCAAAGATGAAGGGCCGGCCGCGTGGGCGGCGGCGAGCGCGGGCACGCGACCGTGACCACGATCCTGACAGTGACCGTGACTCGCGGTCTAGTGACAGTGATACAGCGTCTCCTTCGGATCCTAGGATACAACGGCGGGTGTCTCTCCGAATTGGCGCAGACAAGCCGAGTGAAGATGATGAGGGGGGAAGGGAGAAAGAGAAGGACGAAGCGTTCCTTTTAGAACTTAGGGAGTTTTATAAGGAAGACGTTAAGATTGTACACACCAAGTATAATTATAtctCACTACGAAAACTGTATTCGCGCGTGAAGTCTTACGGCGGCTATGAGACAGTGTGTCGGGGGAGGATTTGGTGTTTGATATATGAAGGAAAACTAGCTCCGAGGGCAAAGAAGTTATATGAaagATACCTCTTGCCTATGGAAAATCACCAACGCCGCCAAAACTCCCGACTCCTCCCAAAAATCAACGGCAAAATAGACGATAAAACCATAGCCACAATAGACGTCACAGAGTCGCCTCTACGTGACATAGACAAACCCATAGATAAGGCAGACAAACGACTGCGCACGCCGTCGCCCAAAGACAAAACAATTCTAGACAATGAAACCggagaaatattaaaagacgACATTAATGTGACTTCAAAACCGGCTGAAGAGCTGAACAGGGAGTTTCTAGAAGCTATATCCAAGCAGAAGGAGACGGAGGAGAGAGAAGAGAAGGAGATAGTGAAGATTTCAGTGAAGCCCGTAGAGAAATTGATTGAGAAGGATGATAAGGGTTTCCTGAATGAATTGACTCAGAAGTTGCATTTGGgcAACACTGACACTACAATATTAAAAGAGCTGTCGGACGCGCAGAGCAGTGTTGCCAGCAATGCGCTAACTAGCCTATCGTCACTGAGTGAGAAGTACGCTGTGAACGGACACAGTTCTGTGCCCCCGCTGGGAATTGATCAGCAAAAATCACGACCGGTGGGACGAAGCTCCCTTCGAGCAGTTCGAGTTAAGCCGACGAGACCACAACTGCCGTCGAGTACCCccCCTCAATCATCAGTGACGGAAAATTCACCGCCCCCACCAGCGCCCTTGACCAACTTCGGGATCCATCACCCCCCTGCCCCTCCCAGACAAGCGCCCCTCAAAACTACTTCGCATAGTGATGACGAAATCGTTGAGGTCCCATACATACCAAAAACACCAGAAATAATAGACCTAGATGAATATCCTGAAAGCCCGCAAGGTGTTAAGAAGAAAAAACTAGATATTCTCAAAGAGAGGGGCCTAGAAGTGACGGCGATACCCCCTGCACCCATTTGGCCTCAAGTGCTAGCGACCCCCATAGCGCCCCTCATAAATCCTACCCCCGTTATACTAAATCCTGCGGTACAACACCAAATCATGACGCAAGCGCAGCTGTTTCAAATGTACAATATTATTCCTCCGAATTACAACAATGGCGCTGTACCACCCAGAGTCATCCAAGCGACTAGTGCGTTCGGGACGTCGGGCCCCGAAAAAACGGTCTACGGTAACCCAAAGGACCCGTTCATGCCGCCCCCGCACGTCCTACAAGGCACCCCCATCAAACCCCAAAGAACCATTCAAGTCACCGGACCGACCCCCCAAGATATTCTGGATCTTACGTGCAAGTCTCTGTCTCCCCCACCTCAGAAACCAGCTGTGGAAATTGTCAGACTACCCCCACAATCGCCCTCAAAAACACCGACTCCGCAGAACTTATCCAAAAACTACACCCTGGTGGATGGAAAAGCCGTTGTCGGCTCCAATTTGGAGATAACGCTTGTTAACCCCAAAACGCCAACGCCGCCAAAACGACCCCCACAGAAGCGGTCTTCGAACGGTAAATTCATCTCGACAAAGACGCCCACGCCCCCCAAAGACTACACAAAACCATTCCCGCCCCCGTCCCCGTCGGGCGTCAAAAAACCCCCAATAGTAGTTCCGAATTATCAAATTTCTCGCGACGACGTCTCACCAACGAGTTCTACGGGGTCCAAGGAGTCCCAAAACAGTGTTCAGAACAATTTAGCTAACGTATTTAAGGGGCAGAATTTGACCCAAATGATGGATATGCAGAAGAATGTGCCCCTTACCCCTTTTATGGACCCGATGTATATGAACGCGTTTTATAGCAGTCTGGGCCAAATGGACCAACGTCAATTGGCTCTGTATAGAGACTTTATGGCGAATCAGTTTAGGGGATATTCGGGTTTATTGAATATAGGAACGCCGACAACGAAAAATTAG
- Protein Sequence
- MFLKSGFIINKYLITKDEVLAINEKVVLRAEDLLSWVCDGGGWRWGIRAVWKEACAPPAENKLTSPLHLTKLDFSDVEKEKSTMSLDADSPGVVVFSYPRYCRYRAILARLEGIQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPKMKGRPRGRRRARARDRDHDPDSDRDSRSSDSDTASPSDPRIQRRVSLRIGADKPSEDDEGGREKEKDEAFLLELREFYKEDVKIVHTKYNYISLRKLYSRVKSYGGYETVCRGRIWCLIYEGKLAPRAKKLYERYLLPMENHQRRQNSRLLPKINGKIDDKTIATIDVTESPLRDIDKPIDKADKRLRTPSPKDKTILDNETGEILKDDINVTSKPAEELNREFLEAISKQKETEEREEKEIVKISVKPVEKLIEKDDKGFLNELTQKLHLGNTDTTILKELSDAQSSVASNALTSLSSLSEKYAVNGHSSVPPLGIDQQKSRPVGRSSLRAVRVKPTRPQLPSSTPPQSSVTENSPPPPAPLTNFGIHHPPAPPRQAPLKTTSHSDDEIVEVPYIPKTPEIIDLDEYPESPQGVKKKKLDILKERGLEVTAIPPAPIWPQVLATPIAPLINPTPVILNPAVQHQIMTQAQLFQMYNIIPPNYNNGAVPPRVIQATSAFGTSGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRTIQVTGPTPQDILDLTCKSLSPPPQKPAVEIVRLPPQSPSKTPTPQNLSKNYTLVDGKAVVGSNLEITLVNPKTPTPPKRPPQKRSSNGKFISTKTPTPPKDYTKPFPPPSPSGVKKPPIVVPNYQISRDDVSPTSSTGSKESQNSVQNNLANVFKGQNLTQMMDMQKNVPLTPFMDPMYMNAFYSSLGQMDQRQLALYRDFMANQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01204657;
- 90% Identity
- iTF_00878654;
- 80% Identity
- -