Basic Information

Insect: Pieris macdunnoughii
Gene Symbol: ZNF296
Assembly: GCA_905332375.1
Location: CAJOBZ010000038.1:389672-400414[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.069 4.2 7.9 1.3 1 23 230 252 230 252 0.97

2 11 0.054 3.3 8.2 0.9 1 23 259 281 259 281 0.98

3 11 0.039 2.4 8.7 1.3 1 23 285 308 285 308 0.95

4 11 0.0012 0.071 13.5 2.1 1 23 315 338 315 338 0.94

5 11 2.3e-05 0.0014 18.9 0.6 2 23 344 366 343 366 0.95

6 11 2.7e-08 1.7e-06 28.1 0.2 1 23 382 404 382 404 0.99

7 11 1.1e-05 0.0007 19.8 0.8 1 23 410 434 410 434 0.93

8 11 6.9e-06 0.00043 20.5 0.7 2 23 443 465 442 465 0.96

9 11 9.9e-06 0.00061 20.0 0.4 1 23 471 494 471 494 0.97

10 11 5.3e-06 0.00033 20.9 3.2 1 23 503 525 503 525 0.99

11 11 0.00045 0.028 14.8 0.3 1 23 531 554 531 554 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.069	4.2	7.9	1.3	1	23	230	252	230	252	0.97
2	11	0.054	3.3	8.2	0.9	1	23	259	281	259	281	0.98
3	11	0.039	2.4	8.7	1.3	1	23	285	308	285	308	0.95
4	11	0.0012	0.071	13.5	2.1	1	23	315	338	315	338	0.94
5	11	2.3e-05	0.0014	18.9	0.6	2	23	344	366	343	366	0.95
6	11	2.7e-08	1.7e-06	28.1	0.2	1	23	382	404	382	404	0.99
7	11	1.1e-05	0.0007	19.8	0.8	1	23	410	434	410	434	0.93
8	11	6.9e-06	0.00043	20.5	0.7	2	23	443	465	442	465	0.96
9	11	9.9e-06	0.00061	20.0	0.4	1	23	471	494	471	494	0.97
10	11	5.3e-06	0.00033	20.9	3.2	1	23	503	525	503	525	0.99
11	11	0.00045	0.028	14.8	0.3	1	23	531	554	531	554	0.96

Sequence Information

Coding Sequence: ATGAATACGTTGAATCCGAAGTCGATTGTACGTTGCATAGGCTGTTTATGTGAAGAAAGTGTATCaacattcaaattaaaaagtgAACTTTTGCGGGTCGTTTTTCAGgaGGATTGTTTAAAACTTTGTTATATTTGTAAGAAATTGGCATGTAACGCAGATTTATTTGTGAGAACAGTTCAGACTAATCAATTAAGGCTGCAgagtttaataaatGGCTCTGATATCACAGACCTTAAGATAGAATCTCACCCAATTCTTCAGTtacaaactaaaattatagatCTAGATAGTCATGAAATAGATGAACTCACACCAAGAATAGAACAAACCAGTAATATTGGAGTGAAGTTAGAGAAAAATGATGAAAGAGATGATGAAGTGTGTGATGAAATCCAGGATGGATCGGATAATAATGCAgaatGTGATTTGCCGTTAATTAAACAAGAAGATGTTAAAGACATTAAAATTGAACTAAGTTTTCTAGATAAGGAtgaaatgattaaaaaatgtaaaaaaaaagtcataaaaaagaaaacagcTAGGAAAAAAGTAGAATCATTTAATGAAAACACAGACGATAGAACTGATGAGACACCAAACATAATATTAGTGAATATATCAACAGAAGACTTTATGAGAGAACGTGAAGAAATGGCGAAGAAAAATCTTTACATGGCTGCCAAGTACAAGTGCAAGGATTGTATAAAAGGTTTCATATACAAGGAAATATATGATAAACATATGAAACTGCATTTAAAGaGTAATGGTAAATACATGTGTGAAATTTGCAAGCAAAGAATGGATTCAGTAGAAAAATTAGCGAGGCACAAGaaaaagcatttaatTCGTTATAAATGCCAGGAATGCGGAATAATAAGGAATAATCATAGCACAATAAAGGATCATTATACATCAGTACATAATAAGCAAAACATACTCTACCAATGTCCGGACTGTTCTAGAGAGTTCTTAACCAGTGGAGCCCTTCGCCGACACAAACATTACAGACATAAAAAGAATAGAATTACCTGCGATATTTGCTTGAAGTCATACGTCACCAAATACTATTTGAGGAAGCACATTcaattACAACATTCGGGAGATAATTCCTTTAGTAAATGGCAGGAGTCCCGGTGCAATTACAAGTGTGAGGAATGTGGTAAGGCGTTCTCGGCCCCGTCTCAACTTAAAAACCATATGATTAAGCACTCTGACACGAGGAGCTTTTACTGCGTTGAGTGTaataaAACGTTCAAAACCGAGATATCTTTAAATCAACATTTAAAAACGCTGCCACACGTCGAATACTCTGAATTACCCCTCCAATGTGACCAATGCGACAAGCGATTTCGTGCTAAAAGAGATTTAGCCAATCACATGAACAGAATACATCTCGGGACAAAACCTTATCAGTGTGACAAATGTGAAAAGGGTTATGCGGACCAATGGAGTTTGACAGAACACATTAGGTATAAACACGAAGGGGTGGTAAAACCTAGGAAATACCCATGTACTATATGTGATAAAGTATTTAAGACAAACAGTACATGCAAAATGCATATACGCACGCACACAGGTGAACGCCCATACAAATGTACGAAATGTCCGGCGTCTTTTTCACAATCAGGAATCTTAAACACACATGTAAAATTAGTGCATCTAAAGCTGACTAGAGACGGAAGACCTAAAGTCAGCGCAATTGATAAACCGCGAtatgattataattaa
Protein Sequence: MNTLNPKSIVRCIGCLCEESVSTFKLKSELLRVVFQEDCLKLCYICKKLACNADLFVRTVQTNQLRLQSLINGSDITDLKIESHPILQLQTKIIDLDSHEIDELTPRIEQTSNIGVKLEKNDERDDEVCDEIQDGSDNNAECDLPLIKQEDVKDIKIELSFLDKDEMIKKCKKKVIKKKTARKKVESFNENTDDRTDETPNIILVNISTEDFMREREEMAKKNLYMAAKYKCKDCIKGFIYKEIYDKHMKLHLKSNGKYMCEICKQRMDSVEKLARHKKKHLIRYKCQECGIIRNNHSTIKDHYTSVHNKQNILYQCPDCSREFLTSGALRRHKHYRHKKNRITCDICLKSYVTKYYLRKHIQLQHSGDNSFSKWQESRCNYKCEECGKAFSAPSQLKNHMIKHSDTRSFYCVECNKTFKTEISLNQHLKTLPHVEYSELPLQCDQCDKRFRAKRDLANHMNRIHLGTKPYQCDKCEKGYADQWSLTEHIRYKHEGVVKPRKYPCTICDKVFKTNSTCKMHIRTHTGERPYKCTKCPASFSQSGILNTHVKLVHLKLTRDGRPKVSAIDKPRYDYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01202656;
90% Identity: iTF_01206769; iTF_01205125; iTF_01204269; iTF_01202656;
80% Identity: -