Basic Information

Insect: Pieris macdunnoughii
Gene Symbol: -
Assembly: GCA_905332375.1
Location: CAJOBZ010000001.1:3995187-4002784[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.013 15.8 4.6 1 23 167 189 167 189 0.98

2 11 5.6e-07 3.5e-05 23.9 1.6 1 23 195 217 195 217 0.99

3 11 3.5e-05 0.0021 18.3 1.7 1 23 223 246 223 246 0.95

4 11 0.028 1.7 9.1 3.8 1 21 252 272 252 274 0.95

5 11 8.7e-05 0.0053 17.0 2.7 1 23 280 302 280 302 0.99

6 11 1.5e-05 0.00094 19.4 1.2 1 23 308 330 308 330 0.98

7 11 0.0013 0.082 13.3 0.5 1 23 338 361 338 361 0.97

8 11 0.0052 0.32 11.4 4.6 2 23 368 389 367 389 0.96

9 11 3.1e-05 0.0019 18.5 1.5 1 23 395 417 395 417 0.99

10 11 2.5e-05 0.0015 18.7 4.7 1 23 423 446 423 446 0.96

11 11 1.7e-06 0.0001 22.4 3.3 1 23 460 482 460 482 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.013	15.8	4.6	1	23	167	189	167	189	0.98
2	11	5.6e-07	3.5e-05	23.9	1.6	1	23	195	217	195	217	0.99
3	11	3.5e-05	0.0021	18.3	1.7	1	23	223	246	223	246	0.95
4	11	0.028	1.7	9.1	3.8	1	21	252	272	252	274	0.95
5	11	8.7e-05	0.0053	17.0	2.7	1	23	280	302	280	302	0.99
6	11	1.5e-05	0.00094	19.4	1.2	1	23	308	330	308	330	0.98
7	11	0.0013	0.082	13.3	0.5	1	23	338	361	338	361	0.97
8	11	0.0052	0.32	11.4	4.6	2	23	368	389	367	389	0.96
9	11	3.1e-05	0.0019	18.5	1.5	1	23	395	417	395	417	0.99
10	11	2.5e-05	0.0015	18.7	4.7	1	23	423	446	423	446	0.96
11	11	1.7e-06	0.0001	22.4	3.3	1	23	460	482	460	482	0.97

Sequence Information

Coding Sequence: ATGGCACCTCTTCGTGGAGGGAATTCTAAAAACCAAGCCTGTGTCAAGCAGGCTATGACGGTATCTGCAAACCAAACAACTCAGGGACCTTCTACCCCTAGAGtcacCGTGAAAGAAGATATGAAGGAGCCAGAACAAAGTGTAACTTATTTTGTGGATGAAGAAGGAAGATACTATTACCAGCCTTCTGTGGACAATGAAAATCTTACCATGACTATTGCTAATGCAAATGATTCTGAACAAAAGCATATAATAGTGAATGAAGATTACCAAACAGTCACATTAGTTCCGTCGGAGACTGATATGGGTGAAGTCAGCTATGTGCTGGTGGTTCAAGATGACAAGCAagttatgaatattaatataaaggtTAATgaggAGGAGAATGAAGGTGATGTTTATACATTTGAAGATGAAGAAGAAATAACAGAAAAAGTTGATGAGTCTTCAGATTCCTTGGCTAAGCCAAAACGCAAGCAAAAGACTTCGCGGcctaattataattgcaattattgtaattatgtgAGTCACAGAAAGTATTTGCTCTTAAGGCATATGAAGTCACACTCAGCTGAACGACCATTTAAGTGTAACGTTTGTGACCGGGCATTTAAGACCCGGGTTTCACTGAACAATCACACAAACACTCACAATGGTATCAAGCCTCATATTTGCAAATATTGCAGCACACCTTTCACTACTTcagGTGAGCTTGTAAGGCATGTTCGCTATAAGCACACTCATGAGAAGCCACACCGTTGCACTCAGTGTGACTATGCCTCGGTGGAACTGTCCAAGCTGAGAAGACACATACGCTGTCACACTGGAGAGAGGCCATATCAGtGCCCGCATTGCACATATGCTTCACCGGATACGTTCAAATTAAAACGTCACTTGCGCACGCACACCGGCGAGAAGCCATACAAATGCGATTCTTGTAACATGTCTTTCACCCAATCCAACTCGCTGAAAGCTCACAAACTTATCCACAATGTGTCAGAGAAGCCAGTGTACGCATGCGAGCTTTGCCCGGCAAAGTGTGGACGTAAAACTGATTTGCGTATTCACATTCAGAAGTTGCATACATCGGACAAGCCCCTTAAATGCAAGCGTTGTGGGAAAACCTTTCCAGACCGATACTCTTGCAAGGTTCATAATAAGaCCCATGAAGGCGAGAAATGCTACAAATGCGAGCTTTGTCCCTATGCATCGACAACGCTTCGACACTTGAAGGCCCACATGCTCAAACATACTGATGAAAAACCGTTTGTCTGCGATCAATGTAACCAATGCTTTAGGCAGAAGCAGCTTCTTCGTCGTCACCAAAACTTGTACCACAACCCTGATTATTCGCCAAAACCACCCAAAGAGAAAACTCACGTTTGCCACGAATGTAACCGCAGCTTTGCACACAAggGGAACCTCATTCGTCACTTGGCTATTCATGACCCAGATTCTAATCATCTTGAGCAGGCGTTAGCTCTAAGGATTGGCAGACAGAAGAAACTTAGGCCATACCCGGAAAAAACCATACGCGAAGAGAATTCCAGTCCGCTTCAAGAAGTTGTTAAAATAGAAGTGGCCAGCAATGAAAATAAAGAAGATGAAAATGTGGAAATAACTGGTGAAGAAAATCAAGAGTATGTTGTCTTAGAGGTCATACAATTGGAAGATGGGTCTGAGCAACAAGTGTGCCTCATCACACCGCATTACTCTGACATGGAGAGACGAGAAGAAAGTGATTCAGCAAACGCTGATGATAATTCAGAAAGCAACCAAGAATTATTCTACAAAGAACAACTAAGAAAGACAATCGAACAAAATTTGAAAGCAGAAAAAGACTTAGATACTTGCTTTGGATTTGATgaagaagaagaagaggaAGAGGAGACTGTACCCAAATTTGAGcaacaagaaaataaatattatagtctCCAGTATGAATTAAGCGACGAAGAAGATTTCCCACATCAGTATGAGTCTGCAAGCGATGCATCTGAAAAAGATGGTGAGTAA
Protein Sequence: MAPLRGGNSKNQACVKQAMTVSANQTTQGPSTPRVTVKEDMKEPEQSVTYFVDEEGRYYYQPSVDNENLTMTIANANDSEQKHIIVNEDYQTVTLVPSETDMGEVSYVLVVQDDKQVMNINIKVNEEENEGDVYTFEDEEEITEKVDESSDSLAKPKRKQKTSRPNYNCNYCNYVSHRKYLLLRHMKSHSAERPFKCNVCDRAFKTRVSLNNHTNTHNGIKPHICKYCSTPFTTSGELVRHVRYKHTHEKPHRCTQCDYASVELSKLRRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCDSCNMSFTQSNSLKAHKLIHNVSEKPVYACELCPAKCGRKTDLRIHIQKLHTSDKPLKCKRCGKTFPDRYSCKVHNKTHEGEKCYKCELCPYASTTLRHLKAHMLKHTDEKPFVCDQCNQCFRQKQLLRRHQNLYHNPDYSPKPPKEKTHVCHECNRSFAHKGNLIRHLAIHDPDSNHLEQALALRIGRQKKLRPYPEKTIREENSSPLQEVVKIEVASNENKEDENVEITGEENQEYVVLEVIQLEDGSEQQVCLITPHYSDMERREESDSANADDNSESNQELFYKEQLRKTIEQNLKAEKDLDTCFGFDEEEEEEEETVPKFEQQENKYYSLQYELSDEEDFPHQYESASDASEKDGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01205919;
90% Identity: iTF_01204266;
80% Identity: -