Pmad007497.1
Basic Information
- Insect
- Pieris macdunnoughii
- Gene Symbol
- RCOR3
- Assembly
- GCA_905332375.1
- Location
- CAJOBZ010000018.1:1439327-1448491[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-10 9.3e-07 28.8 0.0 3 46 133 176 131 176 0.97 2 2 6.8e-12 7.6e-09 35.5 0.0 3 46 399 442 397 442 0.96
Sequence Information
- Coding Sequence
- ATGGTGTTAGCTGAAAGAAGTAACGATGTTCGTAACGGGAAGCGTTCCAGAGGGCCAAGCCCTAATGGGCATGGGAGCCCAGATTCAAGCTCAGAAGATGAAAATGCAGTAGTGCCATTTGCAGCTGAGAAAATCAGAGTAGGCCGTGACTACCAGGCTGTCTGCCCTGAGTTGGAGCCAGTTGAGCAAAGGAAACCAGACCAAATATCGGACCGGGCATTACTTGTTTGGTCTCCAACAGCTGACATATCTGATACCAAGTTGGATGAGTATATAACAACAGCAAAGGAAAAGTATGGATATAATGGTGAACAGGCCTTGGGTATGCTGTTTTGGCATAAGCATGATCTCAGCAGGGCATCTATGGACTTGGCTAACTTTACTCCTTTTCCTGATGAATGGACAGTTGAAGATAAGGTGCTGTTTGAGCAAGCATTCCAGTTTCATGGAAAGAGTTTTCATCGGATACGGCAGATGcTGCCAGATAAATCAATAGCATCACTGgtgaaatattattactcATGGAAGAAAACCCGCGCTAGAACTTCATTAATGGATGTGGTTAGTGATGGCCGTAATGCTACAGCTTCTGGTACAGCTAAGAAGGATTCTCCAGGTGCCTCCGAACCGGGCGGTTCAGACAAGGATTCGGACAATGATGAGAAGAAGTGGATTTACCATCGTGGTATTGTCCGTGGAAGCAAGCCAACTACGGCCGGCGGGCCCTCACGTCGCGCCGGCCAAGCCGAGGGCGACGGCGGTGAGGCAGGAAAATGGTGCACAGTGTGCGGAATACTATGCACCCAGACAACGCAACACAACTCCCAGAAACTTTGCCAGGCATGCCTCGTGCACGCCAGACGCACGGGCAGTATGCGACCGCTGTGTGGGCCGAGCGGGCGACGCGGGCCCGGCTTTAAACAAGTGCGGTACAAGCATCGCTTGCCTCGTGGTATTTACATCAACCACGATGATCTGGTTGCCATGGCGACCGGCCCTCAGCCCGGGGACGCCGCCCAACCGGGGCTCGTAAACCAGGGCGAGGCCATGCTCAAAGCGATGGATAGAGAAATTATATCCTACAAACGACAAgtACAGCAAAATAAACAACAGTTAAGCGCGATAAAACGTAAAGTTGGCGATTTGGGAGTGGAGGAATACAGGCCAGGTGAACCTCCGGCTAAGATTAACTCACGCTGGACCAATGAGGAGTTGCTAATGGCTGTAACAGCTGTGCGGAAATATGGTAAAGACTTCCAAGCAATTGCTGAAACGCTAGGAACCAAAACAGAGGCCCATGTGCGTACATTCTTCGTTTCATATAGACGTCGTTACAATCTGGATGCCGTACTTCGGGAACACGAAGCTGACCGCGGAAATGCTAATCATATACAGCCAGGTACCACAAGCACAGAGGCAGCTGAGAATAATGACGAGAGCAACGCTAATGGTAGCAGCAGTTCGCCCAAGAGCACTGCTAGTAAAGATGAAAAAACGGAAGTGGACAGCGAGGGTGTCTCTATCGGCGCATCCGCAGAGCAGGGCGGGGCGCCCACCACGCCCCCCAAACAGAAAACTGCTAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENAVVPFAAEKIRVGRDYQAVCPELEPVEQRKPDQISDRALLVWSPTADISDTKLDEYITTAKEKYGYNGEQALGMLFWHKHDLSRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSDGRNATASGTAKKDSPGASEPGGSDKDSDNDEKKWIYHRGIVRGSKPTTAGGPSRRAGQAEGDGGEAGKWCTVCGILCTQTTQHNSQKLCQACLVHARRTGSMRPLCGPSGRRGPGFKQVRYKHRLPRGIYINHDDLVAMATGPQPGDAAQPGLVNQGEAMLKAMDREIISYKRQVQQNKQQLSAIKRKVGDLGVEEYRPGEPPAKINSRWTNEELLMAVTAVRKYGKDFQAIAETLGTKTEAHVRTFFVSYRRRYNLDAVLREHEADRGNANHIQPGTTSTEAAENNDESNANGSSSSPKSTASKDEKTEVDSEGVSIGASAEQGGAPTTPPKQKTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01202421;
- 90% Identity
- iTF_01203989;
- 80% Identity
- -