Pmad010601.1
Basic Information
- Insect
- Pieris macdunnoughii
- Gene Symbol
- arid5b
- Assembly
- GCA_905332375.1
- Location
- CAJOBZ010000031.1:2950779-2967645[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-09 3.6e-06 27.2 0.2 3 89 248 320 246 320 0.86
Sequence Information
- Coding Sequence
- ATGGAGAAGAGTATTTGTGTATCTTGGTCCAAAACTTTAGGGAATATGAATTCACCAGGTAGAGTCAGGACCCAGGGCCTCAGAATATGcacttttGACGAGGTCCTAGCGATTAATGAAAAGGTGGTGCTTCGTGCTGAGGATCTACTCTCCTGGGTCTGTGATGGAGGAGGCTGGAGGTGGGGCATCCGGGCCGTTTGGAAGGAGGCTTGTGCCCCCCCTGCTGAGACTAAGCTGACATCTCCCCTTCACCTTACAAAACTGGATTTCAGCGATGTGGAGAAAGAGAAAAGTACTATGTctCTGGATGCAGACATCCCCGGAGTTGTGGTGTTCTCATACCCGCGTTACTGCAGATACAGAGCGATTCTTGCCCGTTTAGAGGGTATCCAAGCTGACTGGTTGAGAGACTCCCTGGTGGCCGCTTTGGGAGGGTATGCGGCACCCACAAATAACACTAGGATATTGTATTGTAAGGACACCTTCGAATACCCAGAACTAGAAGGTCATGAGTTCGTGTGTAACCATCTAGCGCCAAAGATGAAGGGACGGCCGCGTGGGCGGCGGCGAGCGCGGGCACGCGACCGTGACCACGATCCTGACAGTGACCGTGACTCGCGGTCAAGTGATAGTGATGCTGCGTCTCCATCGGATCCTAGGATACAACGGCGGGTGTCTCTTCGAATTGGTGCAGACAAGCCGAGTGAAGATGATGAAGGAGGAAGGGAGAAAGAGAAGGACGAAGCGTTCCTTCTAGAACTTAGGGAGTTTTATAAGGAAGACGTTAATATTGTACACACCAAGTATAATTATAtatcaCTACGAAAATTGTATTCACGCGTGAAGTCTTACGGCGGCTACGAGACGGTCTGTCGAGGGAGGATATGGTGTTTGATATATGAAGGAAAACTAGCGCCGAGGGCAAAGAAATTATATGAAAGATACCTCTTGCCTTTGGAAAAGCACCAACGCCGCCAAAACTCCCGGCTCCTGCCGAAAATCAACGGCAAAATAGACGATAAAACCATAGACACAATAGACGTCACAGAGTCGCCTCTACGTGACATAGACAAACCCATAGACAAAGCAGACAAACGACTGCGCACGCCGTCGCCCAAAGACAAAATTATTCTAGACAATGAAACTggtgaaatattaaaagacgAAATTAATGTGACTTCGAAACCGGCTGAAGAGCTGAACAGGGAGTTTCTAGAAGCTATATCCAAGCAGAAGGAGACGGAGGAGAGGGAAGAGAAGGAGAAAGTGAAGATTTCAGTGAAGCCCGTAGAGAAATTGATTGAAAAGGATGATAAGGGTTTTCTGAATGAATTGACGCAAAAGTTGCATTTGGgCAACACTGACACCACAATATTAAAAGAGCTGTCGGACGCGCAGAGCAGTGTTGCCAGCAACGCGCTAACTAGCCTATCGTCACTGAGTGAGAAGTACGCTGTTAACGGACAAATGCCCGCGCTGGGAATAGATCAGCAAAAATCACGACCGGTGGGGCGAAGCTCCCTTCGCGCAGTTCGAGTTAAGCCCACGAGACCGCAACTGCCGTCCAGTACCCcCCCCCAATCATCAGTGACGGAAACTTCACCGCCTCCACCAGCGCCCTTGACCAACTTCGGGATCCATCACCCCCCTGCCCCTCCCAGACAAGTGCCCCTCAAAACTACATCACACAGTGATGACGAAATCGTTGAGGTCCCATACATACCAAAAACACCAGAAATAATAGACCTAGATGAATACCCCGAAAGCCCGCAAGGTGTTAAGAAGAAAAAACTAGATATTCTCAAAGAGAGGGGGTTAGAAGTGACGGCGATACCCCCTGCACCCATTTGGCCTCAAGTGTTAGCGACCCCCATAGCGCCCCTCATAAATCCTACCCCCGTTATACTAAATCCTGCGGTACAACACCAAATCATGACGCAAGCGCAGCTGTTCCAAATGTACAATATTATACCTCCGACTTACAACAATGGCGCTGTACCTCCCAGAGTTATCCAAGCGACTAGTGCGTTCGGGACGTCGGGCCCCGAAAAAACAGTCTACGGCAACCCAAAGGACCCGTTCATGCCGCCCCCACACGTCCTACAAGGCACCCCCATCAAACCCCAAAGAAGCATACAAGTTACCGGACCAACCCCCCAAGATATTCTGGATCTTACGTGCAAATCTCTGTCTCCCCCACCGCAGAAACCAGCTGTGGAAATTGTCAGAGTACCCCCACAATCGCCCTCAAGAACACCAACTCCACAAAACTTATCCAAAAACTACACTCTGGTGGATGGAAAAGCCGTAGTCGGCTCCAATTTAGAAATAACTCTAGTTAACCCCAAAACGCCAACGCCGCCAAAACGACCCCCACAAAAGCGGTCTTCGAACGGCAAATTCATCTCGACAAAGACGCCGACGCCCCCCAAAGACTACACGAAACCATTCCCGCCCCCGTCCCCATCGGGGGTCAAAAAACCCCCAATAGTAGTACCGAATTATCAAATTTCCCGCGACGATGTCTCACCAACGAGTTCTACGGGGTCCAAGGAGTCCCAAAACAGTGTTCAGAACAATTTAGCTAACGTATTTAAGGGGCAGAATTTGACCCAAATGATGGATATGCAGAAGAATGTGCCCCTGACCCCTTTTATGGACCCCATGTATATGAACGCGTTTTATAGCAGTCTGGGACAAATGGACCAGCGTCAATTGGCTCTCTATAGAGACTTTATGGCGAATCAGTTTAGGGGATATTCGGGTTTATTGAATATAGGAACGCCGACAACGaaaaattag
- Protein Sequence
- MEKSICVSWSKTLGNMNSPGRVRTQGLRICTFDEVLAINEKVVLRAEDLLSWVCDGGGWRWGIRAVWKEACAPPAETKLTSPLHLTKLDFSDVEKEKSTMSLDADIPGVVVFSYPRYCRYRAILARLEGIQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPKMKGRPRGRRRARARDRDHDPDSDRDSRSSDSDAASPSDPRIQRRVSLRIGADKPSEDDEGGREKEKDEAFLLELREFYKEDVNIVHTKYNYISLRKLYSRVKSYGGYETVCRGRIWCLIYEGKLAPRAKKLYERYLLPLEKHQRRQNSRLLPKINGKIDDKTIDTIDVTESPLRDIDKPIDKADKRLRTPSPKDKIILDNETGEILKDEINVTSKPAEELNREFLEAISKQKETEEREEKEKVKISVKPVEKLIEKDDKGFLNELTQKLHLGNTDTTILKELSDAQSSVASNALTSLSSLSEKYAVNGQMPALGIDQQKSRPVGRSSLRAVRVKPTRPQLPSSTPPQSSVTETSPPPPAPLTNFGIHHPPAPPRQVPLKTTSHSDDEIVEVPYIPKTPEIIDLDEYPESPQGVKKKKLDILKERGLEVTAIPPAPIWPQVLATPIAPLINPTPVILNPAVQHQIMTQAQLFQMYNIIPPTYNNGAVPPRVIQATSAFGTSGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSIQVTGPTPQDILDLTCKSLSPPPQKPAVEIVRVPPQSPSRTPTPQNLSKNYTLVDGKAVVGSNLEITLVNPKTPTPPKRPPQKRSSNGKFISTKTPTPPKDYTKPFPPPSPSGVKKPPIVVPNYQISRDDVSPTSSTGSKESQNSVQNNLANVFKGQNLTQMMDMQKNVPLTPFMDPMYMNAFYSSLGQMDQRQLALYRDFMANQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01204657;
- 90% Identity
- iTF_00878654;
- 80% Identity
- -