Pbra014843.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- grn
- Assembly
- GCA_905147105.1
- Location
- LR989935.1:21685181-21691743[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.77 2.4e+03 -1.5 0.2 11 18 52 59 51 63 0.71 2 2 5.3e-19 1.7e-15 56.6 8.0 1 34 93 125 93 127 0.97
Sequence Information
- Coding Sequence
- ATGAAAATCTTTATTTTCACGCTCTATCTCTCTTTATCTAATCGCCACAGTCAGATAAGGACGGAGCGCCGGAAAAACTGGCGCGGGGCGGGGTATAGCCGTACCGCTGGTAAATGGATTGCCTCCCTCTTGGGGGTTCTCATAGTGGGATCTAGATGGCGTAGATATGCTGATATGCGGGCTTGTGAGCGTGATGTGACTGAACGATGTTTGCAAGTGTTTGCGCTCGATTACAGGCCGTCATTGCAGTCAGCGGCGCGGCGGGCGGGCACCTCGTGCGCCAACTGCAAGACGACAACCACTACACTATGGAGACGAAATCAAAATGGCGAACCTGTGTGCAATGCGTGTGGACTCTACTACAAATTACATAATCCCCGAAACAGTTTTACAGTAAGCGATACATTTGTCAGCTACAATGCACAAGCCCTCAATGTTGAAATGTATACTTGCGAATACAATGTTGTTTGGTCTAATTATTCGGAAGGAGCTACAAAGAAAATGGGAGGGTACTCGAGAAATGTGTGCACAATGCGGGTAGATATCTGCAGCGCATTTGTCACGAGAGCATTCCTCGTTTACCTTGGTTTAATTGTTTCTTAA
- Protein Sequence
- MKIFIFTLYLSLSNRHSQIRTERRKNWRGAGYSRTAGKWIASLLGVLIVGSRWRRYADMRACERDVTERCLQVFALDYRPSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNPRNSFTVSDTFVSYNAQALNVEMYTCEYNVVWSNYSEGATKKMGGYSRNVCTMRVDICSAFVTRAFLVYLGLIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -