Pbra014304.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- gata6-a
- Assembly
- GCA_905147105.1
- Location
- LR989935.1:13916572-13926517[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-17 2.6e-13 49.6 3.3 1 35 420 453 420 454 0.97 2 2 6e-18 1.9e-14 53.2 7.5 1 35 481 514 481 515 0.97
Sequence Information
- Coding Sequence
- ATGAAGAGCATGCAGTTGTCACGTGGGGAGGATCCACAAGCCGATAACGGCAGTGAGGCGTTGCAGCTTGTTAAGAACGAGGAGCGGGTCGAAGGCACAGCCGGTGCTAATGAAGGGGAACAGTTGCCTGAGGGCGAGCAGCAGTCAGTAATCACATCGCGCCGAGCGTTACGAACTATCACAACAGCTGGACACATCACCGAGACTCCCGAAGGTATAGATGACGTTAAGGACGAGCCACCCGAACCGCAGTTGGAACCCTACCGTACGGCCGCAGAGTCCGAACGACCATACGATGAAGAACGGCTGCGCGCCGCTGAGCAAGACGCGGCACGCTACCTCGCTTTTAAGCAGGAGCCCTACCGTGCACAACAGCCGCCTTCACCGTCTAATCAGATGGATAAACGCGCTATCCCAGCTTACCGCGCACCTGCAGGGCGCCCGCAATACGGACGTAGTTTGGCGCTGCGCTATGGAGCACCGTACCACGTTATAGTATCACAGGATGGCGAAGAAGCGCCGCCCGATGGAACCGAGACCTACGCAGGAGAGGCTGACGCGCGTCACTATGCTGTAGCCGCCGCTTTGCAAACTGATCATGGGCCTACTTTAGAAATGATCCAGACAACAGCTCTCAATAATCAGCAAGCCGTCGGTGTCGCTTACCAACAGGTGAAGTACGAAGGGCGTGGATCGGGAATCGCAGGAGGGGCGGGGAGTTCTGGTGGCGCTGGAAGCGCAAGCGAAGCGGAAGCGCGGGCAAGCACGTATGCAAGCTTGCAACCTGTGACGTCAGTGCAAGGCGGATATACTTACGCACAAAGTCCTCAGTATGCCACTGGAGGCTATGGTGCCTACGCGCCTGCCGCACCCACTAAAGAGCTGGTGACGCTGTATGGAGGTGGCGGCGGTCGCGGTGAGGATAGCCCGCCGCAATTGCTATACCGCGCTGATCCCACTCTGGCGTCATCGGGATTAGGCACTCGAGTAGTATACGGCCAAGCTCCTTATGAGCCGCCGGCTAGCCCTGCGCCGCAGCAGGTCACGCTGTACTCGCACGGCAGCGCGGTGCAGTACAAGGTGGGCGGTGAATACCTCACCCAGAGTGGAGTTGAATACGTACCTGTCTCTGGATACGAAACTGGTCTGCTTGTTGAGAGCTATGCACCACCCTCGCAGCCCTGGCCTTCGCATAACTTGTTACCTATGGATGAGCAGTTTGACCCTGGAATGGCTGGCATGGGCGAAGTCAAGGAGTGCGTGAACTGTGCGGCCGCTACCACACCGCTGTGGCGCCGCGACGGCACCGGTCATTACCTGTGCAATGCATGTGGTTTGTACACGCGCATAAACGGGGTTAACCGACCGCCACTCAAAGGACAGAAGGCAAAGCCACAGCAAGCGCTGCCGACCAACGGCAACCGACGCGTAGGGGTGACCTGTGCAAATTGTCGCACATCCAACACGACGCTTTGGAGGCGCAACAACAACGGTGAACCAGTATGCAACGCCTGCGGCCTCTATTACAAGCTGCATAATGTCAACCGGCCATTGAGTATGAAAAAGGACGGCATCCAGACTAGGAAACGGAAACCAAAGAGTATGGGTGGTGGACATAGCGGACATGGTGGACACGGTGGCGTATCCCGGGGCGGCGGTTTAACAGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCAGCTGTGGAAGGCGCCGCGCCACTGCTGCTGCTACCTGCAACGCACCACGAAGGCGCGCTATCAGCGTTAGATCGAGGAAGTGCTACACCGACGTCGCACTACAGGCCTCCCTAG
- Protein Sequence
- MKSMQLSRGEDPQADNGSEALQLVKNEERVEGTAGANEGEQLPEGEQQSVITSRRALRTITTAGHITETPEGIDDVKDEPPEPQLEPYRTAAESERPYDEERLRAAEQDAARYLAFKQEPYRAQQPPSPSNQMDKRAIPAYRAPAGRPQYGRSLALRYGAPYHVIVSQDGEEAPPDGTETYAGEADARHYAVAAALQTDHGPTLEMIQTTALNNQQAVGVAYQQVKYEGRGSGIAGGAGSSGGAGSASEAEARASTYASLQPVTSVQGGYTYAQSPQYATGGYGAYAPAAPTKELVTLYGGGGGRGEDSPPQLLYRADPTLASSGLGTRVVYGQAPYEPPASPAPQQVTLYSHGSAVQYKVGGEYLTQSGVEYVPVSGYETGLLVESYAPPSQPWPSHNLLPMDEQFDPGMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHSGHGGHGGVSRGGGLTVEAHSHKVLPPLYAAVEGAAPLLLLPATHHEGALSALDRGSATPTSHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00431146;
- 90% Identity
- iTF_01205363;
- 80% Identity
- -