Pbra014103.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- MYSM1
- Assembly
- GCA_905147105.1
- Location
- LR989935.1:19838914-19843333[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-07 0.00028 21.2 0.1 3 39 84 120 82 121 0.95 2 2 0.73 9.4e+02 0.3 0.1 13 31 215 233 215 247 0.69
Sequence Information
- Coding Sequence
- ATGGCGGAAGACGACGAAATAGATATTCTTGGTGATTTTTCTTTTAATTCGTGCTTTGCTCAAAATAATCAGGGAATACCTTCATGTTCAAGTCGTGAAGACACTGTCCACCCACAGTGGTTGTTGGATTCACCTGCTACAAATTGGTATGATAGCAAGAGCAAAAATAGGTCTAAAGAAGGTCCACCAAGGAAGCTCTGTGGCACAAAATCTTTTCAAAAGAATAACTGTGATAATGCATATGGAGTCGCATGGAGTCAGGAAGAAAGAAATCTTCTTAACAAAGCAATGGAAAAGCATGGCCGAAACATTACGTTAATATCACAAAAATTGAAATCAAAAACAATAACTGAAATTCAAGCTTTGATTGATGCTGAATATGGCATTAGTTTAGACACATCTTGGGAAAAACATCATGACCTTGATCAAATACCTTATGTAGAACAGGAAGAAATAATTTCGGAAGAAGTCAGTATACCAGATGCTATAACTATGGTCACCACTGGCTCTCCAACTATCACTGTACCTAAAATATTCAGAAAATCATTTAAATCACAAGACAATTTTTTAAATACTACTGCCCACAAAAATTCTCATATTAATCAAAACTACAATCTACAAATTACAAAACATAGAGAGAAAATAAAAGCTGTTAAAAAGGTTGGAAATCATAGAAGAAAAGTATCTAAAAACTATGATAAAAGTATTTCACCAGCACGGCTTGGAAATGATTGCCATTCAGAAGAAAGTTTAAAAAGCCCAAAACTACAAATTGTATTAGGTTCTGGTCAAGCCTTACCAGTTTCTGAAGGAGAACAAGTTATAAAAATTGAAAAGAAAAAAGATTCCGAACCAGAGAGTGACATAGAAATTGATGTGGACAGTGACACAGAGAAACAGACAAAGAAATCTCCGGAAGCAAAGGTTTCTGATATGAAGAATGATAAAGAGCCCATAGCTATACCACTAAGAAAGTTGGAAATGCCAAAACGGAGGAGGAAAATTAACTTGAATGGAGGTGGCGGTTACCGTATTATGCACACTGAAGCAGGAGATTTGTATGAAATTAGCTCAGAGCCACGTAAGGAAAGACAACCTCGAAAACCAACAGTACAACTCATACAGTGCAAGAAATATGGCGTTGATAAACCTGCACCATGTGAATTACAACTACATGTATCAGTATTATTAAGTATGGACATCCATGCCCATACGTCGCGGGCAGAAGTGATGGGACTTTTGGGAGGTCAACAAGTGACGTCAGGCCTACTACTTTGCGCGTACGCAGTGGCCAGGGCTGCCGCTAATAGTACACATTGTGATATGGATCCTGTTTCGCAAGCCTCAGCCGGCGAATATCTTACAGCACAAGGTTTGTCAGTCTGTGGTTGGCATCACTCACATCCACAATTTCCAGCGCTACCCTCTAAGCGAGATCTTAGTACGCAGCGCTCGTTGCAGGATGCACTCGAGTGGCGTTTGCCCTTTCTAGCCTTACTGACGTCACCGGCTCCGGCTCCGCATTTCAGATGTTTCCGCGTAGAAGACTCAGAAGACAAGGAAACGCCAATAGGATATCAACTAGAAGTTAAATTAGTTCCTGACTTAACTATAGAAAGTCTACCAAACTATGTACACGGTTTGAAAGAACTCCTAAAGGATGTTGAAAGAACTGAACACAGCATTGATTTATCTAAAGATGTCTGCCCCCACACTGGAGTTGGTTATTTAGATAAGTGTATTTGGAGTGTATCACGCCACATGCGGACAGCAGGATACGAGGCTGACCATCCAGTGCTCAAGCAACTCATACAAGATGTGCGTGACATCTTTAGATAG
- Protein Sequence
- MAEDDEIDILGDFSFNSCFAQNNQGIPSCSSREDTVHPQWLLDSPATNWYDSKSKNRSKEGPPRKLCGTKSFQKNNCDNAYGVAWSQEERNLLNKAMEKHGRNITLISQKLKSKTITEIQALIDAEYGISLDTSWEKHHDLDQIPYVEQEEIISEEVSIPDAITMVTTGSPTITVPKIFRKSFKSQDNFLNTTAHKNSHINQNYNLQITKHREKIKAVKKVGNHRRKVSKNYDKSISPARLGNDCHSEESLKSPKLQIVLGSGQALPVSEGEQVIKIEKKKDSEPESDIEIDVDSDTEKQTKKSPEAKVSDMKNDKEPIAIPLRKLEMPKRRRKINLNGGGGYRIMHTEAGDLYEISSEPRKERQPRKPTVQLIQCKKYGVDKPAPCELQLHVSVLLSMDIHAHTSRAEVMGLLGGQQVTSGLLLCAYAVARAAANSTHCDMDPVSQASAGEYLTAQGLSVCGWHHSHPQFPALPSKRDLSTQRSLQDALEWRLPFLALLTSPAPAPHFRCFRVEDSEDKETPIGYQLEVKLVPDLTIESLPNYVHGLKELLKDVERTEHSIDLSKDVCPHTGVGYLDKCIWSVSRHMRTAGYEADHPVLKQLIQDVRDIFR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -