Pbra006165.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- kn
- Assembly
- GCA_905147105.1
- Location
- LR989933.1:21679339-21689668[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-124 3.2e-120 402.4 0.0 205 387 1 191 1 194 0.99 2 2 1.5e-08 0.00016 20.4 3.2 420 553 200 334 192 345 0.68
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTGGTGATATCAACACAGGTGATGGTAGACGGCCCGCTATTAGCAATATCAGATAATATGTTTGTTCATAATAACAGCAAACACGGCCGTCGAGCGAAACGGCTAGACCCTACAGAAGCGGGCTTATATCCACCGTTGCCAGTAGCAACGCCATGCATCAAAGCAATATCTCCAAGTGAAGGCTGGACATCGGGAGGTTCGACCGTTATCATAGTGGGCGACAATTTCTTCGATGGCCTTCAAGTAGTTTTTGGCACTATGCTGGTGTGGAGTGAGCTGATAACATCACATGCGATACGAGTACAGACACCGCCGAGACATATCCCAGGTGTTGTAGAAGTAACGCTGTCCTATAAGAGTAAACAGTTCTGTAAAGGTGCACCTGGAAGATTCGTTTATGTTTCACTCAACGAGCCCACGATAGATTACGGATTTCAGAGGCTTCAGAAACTTATACCGAGACATCCCGGCGATCCGGAGAAACTGCCAAAGGAAATAATTCTAAAACGGGCAGCGGACTTAGCAGAGGCACTGTATTCGATGCCTCGAAATAACCAATTGGGACTGGGTGCGCCAAGGTCTCCTCCTGCCAGTATGCCTTTCAACTCTTATACTGGACAATTAGCTGTCAGTGTTCAGGATACCGCTGCTTCCCAGTGGACAGACGAGGAGTATGCGCGTAGTGGCGGCGGCTCCGTGTCCCCTCGATACTGCTCGGCCGCATCAACTCCGCATGCCTCTTACCCCCATCCACAACATTACCCGGCGCCGACCTCCATCTTCAACACAACTTCACTGTCTCTGGGGCCATATCATCCGGCGAATATGAATGGACACTTAACTGACCAGTATAACACGTACCCAAAAGATAGCGATTACATTGAAAGAAACGTGGAGTCTAAAGATGACTGTCCCGCAAACACTCATACAAAATGCGATGCTATGAAAGGGCAAACGAAAGAGAAGAGAAGCGCATTCGCGGTCGTAAGACAAAGTCCGCCGCATTTTCAACAAAATTGGCAACATCTCACCGTGCAGTTTGTATTGTCCCCAGGAATGGGAGGTCTTGTATCATCACCGTTCAGCGTGAATCCTTTCTCTCTACCAACGTGCAGCGCCCAACAATATGCGCAGACGGCTCCACTTGCATCTAAGTAA
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTDEEYARSGGGSVSPRYCSAASTPHASYPHPQHYPAPTSIFNTTSLSLGPYHPANMNGHLTDQYNTYPKDSDYIERNVESKDDCPANTHTKCDAMKGQTKEKRSAFAVVRQSPPHFQQNWQHLTVQFVLSPGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_01202981;
- 80% Identity
- -