Pbra005987.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- -
- Assembly
- GCA_905147105.1
- Location
- LR989933.1:5401490-5403499[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.011 27 5.5 0.0 44 85 100 141 88 143 0.75 2 4 0.0021 5.1 7.8 0.2 52 86 202 235 172 236 0.86 3 4 0.0086 21 5.9 0.1 49 83 290 323 277 325 0.82 4 4 0.0047 11 6.7 0.1 49 83 390 423 370 426 0.87
Sequence Information
- Coding Sequence
- ATGGACGCGGCTAATACACACAACCAAAACTATTGGTTTGTCGTTCGTGATGACCATAGAAATGTTATATTTTCGAGCAATAATTTTACCATCCAAAATCCCCAAACCCAAGAGACGAGGTTTATAGTGGATACAGGTGTACATAGTGAGAATAGACAATATGTGCAAGTACAAGATAATATACCTCCAGTTCTTCAGGAAGAAACTGTTAAAGAAATTAAAGAAACAGTTTCTGTAAGAGATGATATCTTTTGGGACAAAAATAAAGTTCAGTTACTTTTAACCCTCTGTCTTCAAAATGGATACAACCCTTCGACTATCGAGCAGATTGAGTGGGCAGAGATTGCTGCCTTATTGGGAACTACTCCAGAAGAATGTGACAAAAAGTTCAGAGGCCTCCGACGAATCTATCTAAGATTAATGAAAAAGAAAAATTTAGGCAAAGATATTAAATGGAAATATTTTAATATTTGTGAAGAGTTTTTTAAAGATTGTAAACTGTCTTTTACTGTATTAGAACCATGGGAAGATTCTAAAATTAGACAATTGTTGAGTATCTACATTGAAAATATCAATAAATTTAGAGACCCAAATTATTTACATAAAGATGTCTGGAAAGAAATTGCTTCTCGGTTACAAACAACAGAATATAATTGTTATCATAAATTTAAAAGTTTGAAAAGAACTTATTTAAACTGGCTTCAACGAAGTAGGGAAACTGGGAAGTTAATTAAATGGACTTATCATCAGTATTTTGAAAGGATATATTACAATTATAATCCTGATTTGGGGCCATGGGATAGAAATAAGATAAGGTTACTTATTAATGCATATGCAGAAATTGCACACATGTTTAAAAATCCTAAATATCAAAAGAAGGAGTTGTGGCGGGAAATTTCAAGAAAGGTGGGTGAAAGTCCAAGCAGCTGTGACAGAAAGTTTAGAAACTTAAAACAAACATATTTAAGGCTTAAAATGAGGGTTGATACTGGTAGATCAGTTACAAAATGGAAATACTATAAAGAATTCTCAACAATTTTTGAAAATGAAGCATATTCTGTTACCAATGATGGTCAGCAAATTGTATACAGGGTAGGTGAGCAGGATTATGTAAAAGAACTTCTCAACTTTTACCTTGATAATAAAGAAAAGTTTTGGGATCCTCTGGTAAAAAAAAAGCCTCTATGGAGAACTATAGCATCAAAAATAGGTTTAACTGCTGGAGAATGTGATAAAAAATATAGAAATCTTAAACAAACTTATTTACGAATGGCTGAAAGAAAGCAACTCAGTGGAAAAAGTAGCACATGGCCCTACTATTCATACTTTGAAAAAATTTATGATCAATCAAAATTAATTAAGAAAGAATGCAAACATGCATGTATGGATAATGTTACACTTAAAGAAATTACCAGTATTGTGAAAGATGTTCATGAAATAAAAGGGAAAGATAAATTTGAACGACTAGTAAGGGTAATAGAGGATTCAAATAATATTCAGAGGGAAAGAAACCGAATCTTGCAAGCACTACTGGATAGGAAATAA
- Protein Sequence
- MDAANTHNQNYWFVVRDDHRNVIFSSNNFTIQNPQTQETRFIVDTGVHSENRQYVQVQDNIPPVLQEETVKEIKETVSVRDDIFWDKNKVQLLLTLCLQNGYNPSTIEQIEWAEIAALLGTTPEECDKKFRGLRRIYLRLMKKKNLGKDIKWKYFNICEEFFKDCKLSFTVLEPWEDSKIRQLLSIYIENINKFRDPNYLHKDVWKEIASRLQTTEYNCYHKFKSLKRTYLNWLQRSRETGKLIKWTYHQYFERIYYNYNPDLGPWDRNKIRLLINAYAEIAHMFKNPKYQKKELWREISRKVGESPSSCDRKFRNLKQTYLRLKMRVDTGRSVTKWKYYKEFSTIFENEAYSVTNDGQQIVYRVGEQDYVKELLNFYLDNKEKFWDPLVKKKPLWRTIASKIGLTAGECDKKYRNLKQTYLRMAERKQLSGKSSTWPYYSYFEKIYDQSKLIKKECKHACMDNVTLKEITSIVKDVHEIKGKDKFERLVRVIEDSNNIQRERNRILQALLDRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770888;
- 90% Identity
- iTF_01205489;
- 80% Identity
- -