Pmel022004.1
Basic Information
- Insect
- Phyto melanocephala
- Gene Symbol
- nfxl1
- Assembly
- GCA_941918875.1
- Location
- CALNXE010003455.1:10113-13514[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 2.8e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.2 1.8e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 2.5e-08 0.00023 21.7 16.8 1 19 206 223 206 223 0.98 4 20 0.00022 2 9.1 13.2 3 19 261 278 259 278 0.90 5 20 1.2 1.2e+04 -2.9 0.7 6 10 303 307 302 307 0.87 6 20 2e-08 0.00018 22.0 13.6 1 19 313 331 313 331 0.99 7 20 1.3 1.3e+04 -3.0 0.5 1 7 356 361 355 363 0.49 8 20 1.3e-08 0.00012 22.6 10.9 1 18 366 383 366 384 0.96 9 20 0.46 4.3e+03 -1.5 0.4 1 5 393 397 393 402 0.75 10 20 3 2.8e+04 -5.0 2.3 5 10 407 412 407 412 0.91 11 20 0.00012 1.1 10.0 12.5 1 18 418 435 418 436 0.97 12 20 2.4e-10 2.2e-06 28.2 14.5 1 19 445 463 445 463 0.98 13 20 0.24 2.3e+03 -0.6 11.7 9 19 508 518 500 518 0.85 14 20 0.057 5.3e+02 1.4 4.5 3 11 531 539 521 540 0.82 15 20 0.39 3.6e+03 -1.3 1.1 6 10 599 603 598 603 0.90 16 20 1e-05 0.093 13.4 5.0 1 12 609 620 609 620 0.97 17 20 3 2.8e+04 -4.2 1.4 15 18 633 636 633 637 0.86 18 20 0.0011 10 6.9 14.0 1 19 648 665 648 665 0.94 19 20 3 2.8e+04 -5.5 2.1 9 13 671 675 670 675 0.72 20 20 8e-08 0.00074 20.1 11.7 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- ATGCCAATAACCAAAAACAAACAGCAAAATGAAGCAAAAAGTCCTACCGAGAAATTCAATGATACCCACGCGAAAAACATAGCAGTCGCTAAAAAACTAGTTGAAAATTATTTTTCTTCTTCGGAGGATGAGGATGATTTGGATGAAAAAACAATTTTAAAATCACTTTATCAGCATTACAATAAGCACGAGGAAGATGAAAATTTGTTGGCAAAAACTGCCGGCTTCTTAGAGAATACTCTACAAACTGGAGCTGCTACGTGTCTTATTTGCATCGGAAGTATAAAACGGTCTAACGCTATATGGTCGTGCAAATATTGCTATTGTTTCTTTCATTTAAACTGTATACGAAGATGGGCTAACGATAGTATGGTCCAGGCAAAATCCCAAATTCATAATGAACAGGGTTACTACAATCACATGGGAGAATATGTTCCACCCAAGAAGCAAAAGTTATTGCATTGGTGTTGTCCACAATGTAGGAAAGAATATCTGCCAGAAGAAAGACCAAGAGAATATGAGTGCTTCTGTGGCAAAGAAATAAATCCTGCACAACAACCCTGGATAGTTCCTCATTCCTGTGGTGAAATTTGTGGAAAAGCCCTACAGCCAAATTGTGGCCATAAATGTACATTACTTTGCCATCCCGGCCCATGTCCACCATGTTCCCAGTACGCTGCTACGTCATGTAAATGCGGAAAATCTCATCCAAAATCTGTACGTTGTGTCGATAAATTATGGGAATGCCAGCTTAAATGTGAATTGTTGCTACCGTGTAAAGAACATGTTTGTAAAAAAATGTGTCACAAGGCCGGACAATGTCCCCCGTGCCAACAGAAAAGTGTGCAGCCTTGCGAATGTGGTAGAAAAAGCGCAAAACGCCAATGCTGTGAGCTAAAGTGGCATTGTGAAAATCCATGTAATAAGCTATATTCTTGCGGCTTGCACAATTGTAAAAAAGTTTGTCACTCGGGTGAATGTGGAGATTGTCCCTTAAGTTTACCGCGATCTTGTCCTTGTGGCAAAACTAAAAAAATTGGACCATGTTCGGAGGTAATAGATACCTGTGGTGATACTTGCCAAAAGTTATTAGCTTGTGGCATACACACTTGTACGCAACGCTGTCATAAAGGCAACTGTAATTTATGTTTGATCATATCCAAAAAGAAGTGCCGCTGTGGTATGCACGAAAAGGAATTGCCATGTTCCAAAGAATTTACATGTGAAACTAAGTGTAAACAAATTAGAGATTGTGGAAAGCATGCTTGTAATCGCAAGTGCTGCGATCGAAATTGTCTTCCATGCGATAAAATTTGCGGAAAACCATTATCCTGCGGTAAACATAAATGTCAATCAATTTGCCACAAAGGACCCTGTTATCCGTGTCAACAAAAGTCTCAAATAAATTGTCGCTGCGGTAAAAGCAAAAAGAGCGTACCTTGCGGACGAGAGCGTGCCGTACGTGTGGTTTGTTTAGAACTTTGTCGTATACCTTCAAAATGTCATCATAACAATAAACACCGCTGCCATAAAAATGAATGTCCGCCTTGTTCCCAACCCTGTGGCTTACCCAACGATACTACCAGGTGTAATCACTTGTGTATGGCGAAATGTCATGCATCGGTTAAAGTGGCTAAGAAATTAAATCCAGATACAATGAGAATTTGGGAGCCTAGCAAACAATTTGATTTGAAGCAAATGCCTCATCCGCGCTGTGAACAAAAAGTAAGTGTAACCTGTATAGGCGGGCATGAAATCGCTGATTTACCATGTTGGAATTCTAAACCTACATCCTGTCAGCGTGTCTGTAATCGTTTCTTAAACTGTGGCAATCACAAGTGTGCTTTAATATGCCACAGTGTACCAGACTTAAAAGACATGAACCAACAGCCGGGTTGTGCACCTTGTAATGAAGGCTGCCAAATTCCACGACCCGAAGGTTGTAGTCATAATTGTCCTAGACCATGTCATATATCACCCTGCAATCCTTGCAGTGTAGCTATTAAGACTAAGTGTCATTGTGGCTTAATGCCCGTCGTTTACAAATGTAGTGATTATTTCAATATAGTGGATAATGAAGGTACAATTTTGGAAAGACAAGAAAACTTAAAAAGCTGTGGAAGCAGATGTTTAAAAAATTTTCCCTGCGGTCATCGTTGCAATTCCATATGTCACTCAGGTCCTTGTCCTTATCCTGAGTCTTGCCGTAAAAAATTACGCATCTATTGTGATTGCAAACGATTAAAAACGGATATTTCATGCGACAAACATCGTGCCGGTCTTCAAAAATTGCAGTGCGATGATAAATGTGCAGAAATTCGAAAAACTTTAGAACATGCTCGCCAAAAAGAAGAGGAATTGTGTCGTAGACAAGAAGAAGAACGTAATCGCTTGGAAGTGGAACAATTTGAAAAGAAATTCAGCAAGCGCAAACCCAAAGAACGCAAAAATCAAGATGTAAAGCAAAAGGATCCTATTAATTGGAAAATATTAGGATTGTATGCCGCCATTTTCGGAGCTGTTTTATTAGCCATTGCTTTAGCTTTTTATGAGGATAATTAA
- Protein Sequence
- MPITKNKQQNEAKSPTEKFNDTHAKNIAVAKKLVENYFSSSEDEDDLDEKTILKSLYQHYNKHEEDENLLAKTAGFLENTLQTGAATCLICIGSIKRSNAIWSCKYCYCFFHLNCIRRWANDSMVQAKSQIHNEQGYYNHMGEYVPPKKQKLLHWCCPQCRKEYLPEERPREYECFCGKEINPAQQPWIVPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCSQYAATSCKCGKSHPKSVRCVDKLWECQLKCELLLPCKEHVCKKMCHKAGQCPPCQQKSVQPCECGRKSAKRQCCELKWHCENPCNKLYSCGLHNCKKVCHSGECGDCPLSLPRSCPCGKTKKIGPCSEVIDTCGDTCQKLLACGIHTCTQRCHKGNCNLCLIISKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCDRNCLPCDKICGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERAVRVVCLELCRIPSKCHHNNKHRCHKNECPPCSQPCGLPNDTTRCNHLCMAKCHASVKVAKKLNPDTMRIWEPSKQFDLKQMPHPRCEQKVSVTCIGGHEIADLPCWNSKPTSCQRVCNRFLNCGNHKCALICHSVPDLKDMNQQPGCAPCNEGCQIPRPEGCSHNCPRPCHISPCNPCSVAIKTKCHCGLMPVVYKCSDYFNIVDNEGTILERQENLKSCGSRCLKNFPCGHRCNSICHSGPCPYPESCRKKLRIYCDCKRLKTDISCDKHRAGLQKLQCDDKCAEIRKTLEHARQKEEELCRRQEEERNRLEVEQFEKKFSKRKPKERKNQDVKQKDPINWKILGLYAAIFGAVLLAIALAFYEDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- -
- 80% Identity
- -