Pmel025468.1
Basic Information
- Insect
- Phyto melanocephala
- Gene Symbol
- grn
- Assembly
- GCA_941918875.1
- Location
- CALNXE010004944.1:11106-22035[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-19 5.8e-16 58.4 6.0 1 34 31 63 31 65 0.97 2 2 4.4 1.5e+04 -3.7 0.9 23 33 80 90 77 92 0.69
Sequence Information
- Coding Sequence
- ATGATTTTACGATTAAAATTGAGCTTGTTTTTGCCTGCTTCAAAGACACTGCAGTCGCTACAAAGTGCCGCCAAAAGAGCGGGGACATCGTGTGCCAACTGCAAAACCACAACTACAACCCTTTGGCGGCGTAATGCCAGCGGTGAACCAGTATGTAATGCCTGCGGTCTCTACTATAAATTGCATAATATGCTACTTACTGCGAAACTGACAACGAAAAACAACGACGTCTACTGCTGTTTGTTGTGCGTGTGGTACTTGAAAGATAAGCAAACCAGCCACCCTCCACCCGGTATAACACCAGCTTTGTCGTTTCAAATGGGTGGCTGTGCAAATGCGATAACATTTTATTTCATTTTTTTATATCATTTAAGTCGTATACAAAAGTGTTTAAACATTAATGTGATTTGA
- Protein Sequence
- MILRLKLSLFLPASKTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNMLLTAKLTTKNNDVYCCLLCVWYLKDKQTSHPPPGITPALSFQMGGCANAITFYFIFLYHLSRIQKCLNINVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -