Basic Information

Insect: Phyto melanocephala
Gene Symbol: -
Assembly: GCA_941918875.1
Location: CALNXE010003125.1:910-11321[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.037 3 9.1 0.6 1 23 1679 1702 1679 1702 0.95

2 12 1.9 1.6e+02 3.7 1.0 1 23 1866 1888 1866 1888 0.93

3 12 0.00073 0.059 14.4 2.8 2 23 1891 1912 1891 1912 0.97

4 12 0.00012 0.01 16.9 0.2 3 23 1920 1940 1918 1940 0.98

5 12 7.2e-06 0.00058 20.8 5.8 2 23 1947 1968 1946 1968 0.97

6 12 8.2 6.7e+02 1.7 0.1 5 23 1981 1999 1980 1999 0.96

7 12 0.035 2.9 9.1 0.1 2 23 2038 2058 2037 2058 0.96

8 12 8.5e-05 0.007 17.4 0.4 1 19 2064 2082 2064 2086 0.95

9 12 4.9e-06 0.0004 21.3 1.8 1 23 2094 2116 2094 2116 0.99

10 12 0.00017 0.014 16.4 6.5 1 23 2122 2144 2122 2145 0.96

11 12 0.001 0.084 14.0 6.4 1 23 2150 2172 2150 2172 0.99

12 12 0.0026 0.21 12.7 6.0 1 23 2178 2200 2178 2201 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.037	3	9.1	0.6	1	23	1679	1702	1679	1702	0.95
2	12	1.9	1.6e+02	3.7	1.0	1	23	1866	1888	1866	1888	0.93
3	12	0.00073	0.059	14.4	2.8	2	23	1891	1912	1891	1912	0.97
4	12	0.00012	0.01	16.9	0.2	3	23	1920	1940	1918	1940	0.98
5	12	7.2e-06	0.00058	20.8	5.8	2	23	1947	1968	1946	1968	0.97
6	12	8.2	6.7e+02	1.7	0.1	5	23	1981	1999	1980	1999	0.96
7	12	0.035	2.9	9.1	0.1	2	23	2038	2058	2037	2058	0.96
8	12	8.5e-05	0.007	17.4	0.4	1	19	2064	2082	2064	2086	0.95
9	12	4.9e-06	0.0004	21.3	1.8	1	23	2094	2116	2094	2116	0.99
10	12	0.00017	0.014	16.4	6.5	1	23	2122	2144	2122	2145	0.96
11	12	0.001	0.084	14.0	6.4	1	23	2150	2172	2150	2172	0.99
12	12	0.0026	0.21	12.7	6.0	1	23	2178	2200	2178	2201	0.96

Sequence Information

Coding Sequence: ATGACTGAGAATGTTCAGTGTCCAGTATGTACTCTATATCTGCATGCGGGTATGGATCTTTCGGATCACTTGGAGACACATCCCAAAGAACAAGTGATTCGAGCTCTAGTGCAAATGACTATATCCGGCTCCGAAGTTGGAAAATCTAATACCTTGGCATCTGTTTTAACTGGAGAAAGTAGTAAAACAGTCAATGGGAATACAAAACCAACAGCAGAGTTGGACGAAAAACCTACACCGGTGGTTATCAGAGATAATGAGCTTAATAGTGGCAGTGCGGGTAATAGCAGTAGTGGAAGAACAAGTAATTCGGCGAGCAATTATTCATTGTGGAACCAAAGTCGTAGTGTTACTAATAGTCAAAATTCTAAGAACATATTAAACTTTTCCGCTACTAAGAGAGAAAGACACAATGAAAACGAACCGGGCAAAACAAAAAATTCTTCACCGAATATAACGGCCAAAACGGACGTTAAGGCAGAATCATCAGCGACTACAATTAAAAAAGATAATGCGACGATTAATAAAAGTATGGACCAATGTTTTTCGAAAAGTAATTTTACTGAAACAAATTCGACCTCAAATTCTGCAACAAATGCGAGTCATTTATATAACCCAAATGCTTTAGAATTGACTAGTGCAAACAACAATATTCAAAATAATTTTAATTTGTTTGGCGGTAATCCTCGATATGATCAGCAACAGCGTATTGACGTTAATAACCAATTATCAGCTCCACCGCACATGCCGCCACCACCACCACCACCACCGTCACCTGCAGTCTCTGTACAAAGTCAACATTCTGGTCAATCACATCAAGAAGTCAATGGCGGCATTTTACCAGGGGGATCAAGTGGAACATTTAATTCTCTGCAGCTACAACAGTTAGCACCTCCACCACCAACTTCACTGCAACATTCATCATCGCTGCATTTAGGTAGTTCAACAAATTCTCATCGTCAGACTCATATGTTTGCAGCAGGCCAACAACATCAACATCAAGCAGCATCCTCTAATTCTCATCATCAACAAAGTTTAAAGCATATATACACACCAAATTTACCACCACCGCCTCCACTGCAGCTCTTTACCTATCAACCGCAAACACATTTGCAACATCATCAAAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAATCAAAGTAAGCATCAAATGACAGGGTCATTGGCAACGCAACATCAACAACAAACATTACAAACCCAAACAGCTTTACAACAACATCAGCAACTTCAACAACATCATTTGCAACATCAGCAAACGATACAGCATAACATAAGAATCCAAGTACCACCGCCGCCAACACCACCACCACTGCCGATTCCAACAAAACATCATTGTTTACCAAAAGAAAACGGTATGTTTGTTCAAAATAATACAACAGAATCTACTAGGCACAGTCAACAGCAGCAACAAGCTAAATCAGATTTGTCACAACATCTACAGCAAAATCAGGAACAAGAACAATCGCAACCTTACACAGAAAGTACACAAAATTCTAATAATCATATTTTGAATTCGAACGAAATTTCGAATAAATCAATTAAAGGAACAGCTGCTGCACAAAATCCAAATATGAATGTACCATCAGCATTAGGTAGACAATCAAATTCACCATTTGCTGCATTGTTGGCAGCAGCAGTCGGTGCCACATCTCCTTCCAATGCTTCGTCAGTTTTACGATACGCTGAGTCACCTGTAGCCCATTATTTGGAACGAGAAAACGGTGATTTCATTGTTCAAGAAACACCCAAACATATTGTTGAATGCGTAGAAAAGGATAATGGAGAGTTTTCTGTTATTGAACGCATATACCATTCTCCACCCAGTGTTTTGCACATTCATGATGACGATGATGGCGATGGCGATGATGAAAACGATAACGACAAATGTGAAGATCAGATTGAAGGTGAAAAAGGTGATAATGTTGATTGTAAGCCCAAACAACACAATATTAATTGTAGTGATAAGACAAAATTTGAAGTGGATGAAAAGCAAAAGAAAACAGAAAAATCCTCTAAAGAGGTATCACCTGTTGGATCGAACAAATCTAATATAAATTCTAAATTTAACGATCATATTAAAGAGGATAATAAATTTGTTGATTCCGTAAGCATTTCGAGTGACAGTGGTGACGAGGAAGAGTTTATATCGCAAGAACGGGAAGATTTTCAAAATACCACCGAAAAAACTAAAAAGAGCCAAATGTCTTTAAAAGCAATGTCAACAACGGCTATCCTAACCCAATCAACATCTTCTTTAGAAACTTTATCACCTTCACTACCAACATGCCATGAAAATGATGACCAAGAAACAAATTCAATGTCGTCCACTTCAACATATACATGTTCTTCCTCTTTAATTACATCAAACACTATCCAAACACAAAATTCTGCAAATATCACTACAAATGGCAGTAATAGAAAGAAATCTTCGAAAAATACAATTACAGTTTTAAGTGACGTACAATTGAATTTAAACGAATATTTAGATCTCGTGGGTAACATAATTGCTTCTAGCAAAGTAGCGGCACAACGAAAATCGACATGCGTACCACCTATTCCTTTGGTAAAAATCGAAAAGGAAGAGGCTATGGATGAATATTTTATCCCAACAACAACAGCAACAAACTTTGAAACCCAACTACTACCATCATCAACAAATAAAGATGAGACTGACAAACTAACTGATATCCCTAGCTGTAGTAATAGTAAAACAACAATAGCCAAAACTAATCATAATATGATTTTCACAAATGAACTAGAACCAGATGAACAGGAAGATGAAAAGCCTGACATTTTAGAAAGCGCAACGGATAATGAAATGAATTCTAATGTCTTATTGAATTCCTCCTCTTGTGCTATAAACACTTTAAATTCCAGTCAGGTTACCAGTGTTATACGTATGGCTACAACTAGCCAACACCAAACGCAGCTGCTACAACAACTGCCTTTAGAAAGCAATAAAAATTCGAGCGAAGCTGAGGATCTCTCACATCGTCAACGTAAAAATCAATCGAAGACAAATTCTAAACCGGCGGTTCCCACTTTGTTGGCGCGTAAAGTTCCAAAAAAACTAGTTATTAAGCCAAAATCTTCAAAGACTGAAGTATTTCCGATAGCAATTACTGCAAATAAATCAAATAAAACTGAAGTAGACGACGATCAGGAAATCCCCACAACTTCTGCTAAGGCAAGGCAAGAAAATACAAATCAAAATTCCATTGAAGAAAATACATTAAACACCGCAGATGTAAAGGTCAAAAGTGAACCCATCACATCTATTACATACGAAAATCAACAACAACAACAACATCTCCCCTATCAACCAGCTACAAGTTTAAGCATTCTGGAGCAGCATCTCAGTTCCAAAGAAACCATTATCGAGTTTAAAGAGGAGGAAAAACCGATCATAACAGAGGAGAGTATAACGCCAACGTCGATCATTAAAGAAATAAAAGTAGAAAATAATGTTAACGATGATGCACGTGTATTATATGATTTTGCCAATTCGAAAAAGACGCAAAACGAAACGTTGTCAACTTTTCCATCAGCCACCTCATTATTTGCAAGTAAACAAACTTCCATAAAAGATATAAGAGCAAGCGACGAGGAACAGCAATTAACAAAGGAACTGCATCATGAAAATAATACAACATCATCATCATCATCAATATATTCATCACAATCAGCTATGGATGCTACAATGCCTTCTAAAGAGCCTAACAATACCTCTGTTTCGGCTGCTACAATGGAACAAATACATCAGCAACCGAATCAAGCTTATACCGATTTCCATTTCAACTATCTTTACAATAACGTTGGCAGTAATGTGACAGCTGTTGCTACTGCCGATCAAACCGACATAAAAAATCATCAACAATTCACCACGTTTTATCAAAATTCCACCAATAATACAATGTTACTGGAAGATTCATCATCAAGTAAGCACTATACGGAATTTCAACAACAGCAACACCAAACTGCTGGAACAGCACACCATCATTGGTTTAACAATAGTAATAATTATCAGACCTCTGAAACAAACCTAACGCCAATCACCTCAAATCATTCAGTTTCTTTATCTGCTGACGGCAACACTGTTGGAATGGAATGCACTGAAGTTAGTAAATACTTGGATTTGGATTCGTGTAAACGCGAACAAAATATTGATGTCAATGTTGGTGATCGTCTAACCGTATCGCAACCTCCTCCGCCATCTTCTTCAACTTCGTGTTCATTTAATGGAACAACTGATAATAGTATGGCTGGTATCTGTTCAACGGGAGTCACCTTAAATATAAGAACCGATGAAAAAATGCCAGCTAAGGGTGAAATTTCCGAACAGGAGAGCAATTGCGATATTGATAATTCATGGAGCCAACCGATGTATGGCGACATTTCAGCCCGATTCTTTAAGACAACATTTCCAGGTATTTTTCCGCAAGATAACGGTTGGAATCATGAAGAATATTTTGCTGTACAAGATCTAAGTGCGTCAACAACAGCACTAGCCACAAGTGGCAGCAGCAATCGATTAAAAAGTTTTGAGCCGAACAATAACAGCAGCAGCAATGCAATGCCAACATTTTTCCAAAATTCAAATGACAATTGTAACATAGATGTAATGCCATCGACATCAGCTAAAATACGTAAGAAACGTAAACGTTGTTCTCAAGATGGCAAAACACCACAATCAAATGGTAAGCGAATGCAGCCAACCTCGACAGTAACCTCACAACAATTGCTAATGCAACATCAAAATGAGCAATCCGGTGTTGAGTTTAATTTGGAGCATCATCAGTTGCAGCAACAGCATCATTCACAACAACAACCGTTGCAACAGCTCACTACATCGACAGAATATTTGGTGGGATCATCAAATGCTAGTTCTTCCTTAGCATCAGGCTTAATGATGCATCAACAACAACAGAACTCTCTACAGCAAGCGCAACCTGAACAACATCAACCCCAACACAAACAACGCACAAAAGTTTATGAATGTGGTCACTGCAATGCCAAGTATTCCAAACTTAAAGATCGGAATGCTCACATGATTGAAGCTCATAATTATATAAGGCAAAATAGAAAACTTTTGTGTCCTACAGCTGGCCTTGCCACACCCTTGATAAATTCGAATGTGCAAGATCCAGCTTTGCCTACAACAAGTGCAGCGGGCAGCGTTTTGACTTCTTTACAGCAAAATGCCGATTGTATGGGCGACTATAAACAGGGTATAGTAAAATTAGAAAATGACAACGTGCAACGTGACCTAGCAGATGTCGAATCAATTAATGCCAATTTAAGTGCTAAAGCGGAAATTATAGAGGATAACAAACAAAACTTAGACCTAATACCGATAAATGGAGCTAATGCTGATGGAATAAACCTTGAATATGATACAAAACCAACAACCACCAGTTTACCATTATCGCTAACTACGCCCACCAATAAATTAACGACACTGTATCGAATGCTGGTATCGTTCAATATGACAACATTAAAACAAAACCAAAGTCTTTCCGAATTTGATGAGAATCTTATTAAGTCTTCGATTTTCTTCTGTTACATCTGTCGACAGAATTTTAATTCAGTTAAATTGTATGATGCCCATTTAACGGAACATCCGGCTGAATGTTTTACATGTGGTAAGAAATTTCAGCGTTGGAAGAATTTCTCATTACATTTGAAACGACATTTGGGTTGGAAGGAATTCGGCTGTACGGTATGCGAAAAGAAATTTGTCGTACGTAGTGCTCTTGTTGAACATATGCGTATGCATTCCGGACTGTCGCCATTGAAATGTAAAGTTTGTGGCAAACACTTTAAACGGTATTCGAATTTAACACAGCATCGTAAGCGCCACACAAAAGTAACTTATCGCAAAAAAGAATATGTTTGTTATTGTGGCGAAGTCCTACCATCTAAAGCACGTTTCTTATGGCATAAGGAAACTCATGATTCCAAGCCGAAATGCTGTCCCCATTGTTGTGATCGTTTCGTACATGTCAACTCATTGCGACGTCACATTCGTCTCGCCCATTCGGACAAATTTGATTATACCGAACCGATGGAGTGTCCCATCTGCAAGCAAATCTTTGCCAAAGCTTCTATGAAGGCCCACATGGCTACTCATTCCACAGATACTCAATATGATTGTGCTATCTGTAACAAGTCGTTTTCGACAAAATGGAATTTAAAAATTCACTCTTGGGTACATGCAAGTCGCACCAACAAACCCTTTAAATGTGAACATTGCCCTAAGGCTTTTGTGCGCGAGGTGGATTTCAAGAATCACATGAACTCGCACAAACAAATAAAACCGTACACATGTGAAGTGTGTGGCTGCAAGTTTATACGCAAATACAATTACATGCGCCATCGAAGAGAGCATCATGGCAATAAAAAGTATACCTGTGATCTGTGTAAAAAGTCGTTCCATCGCCACTATTATCTCATCGAGCATAGACGTATACACACCGGCGAACGTCCTTTCCAATGTACTATTTGCGGTAAAAGTTCAACAACCAAAACTAATCACAACAAACACCTAAAGATCCATCATTCGCGTGACCCATTTACAGTGGAAGTATAA
Protein Sequence: MTENVQCPVCTLYLHAGMDLSDHLETHPKEQVIRALVQMTISGSEVGKSNTLASVLTGESSKTVNGNTKPTAELDEKPTPVVIRDNELNSGSAGNSSSGRTSNSASNYSLWNQSRSVTNSQNSKNILNFSATKRERHNENEPGKTKNSSPNITAKTDVKAESSATTIKKDNATINKSMDQCFSKSNFTETNSTSNSATNASHLYNPNALELTSANNNIQNNFNLFGGNPRYDQQQRIDVNNQLSAPPHMPPPPPPPPSPAVSVQSQHSGQSHQEVNGGILPGGSSGTFNSLQLQQLAPPPPTSLQHSSSLHLGSSTNSHRQTHMFAAGQQHQHQAASSNSHHQQSLKHIYTPNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQSKHQMTGSLATQHQQQTLQTQTALQQHQQLQQHHLQHQQTIQHNIRIQVPPPPTPPPLPIPTKHHCLPKENGMFVQNNTTESTRHSQQQQQAKSDLSQHLQQNQEQEQSQPYTESTQNSNNHILNSNEISNKSIKGTAAAQNPNMNVPSALGRQSNSPFAALLAAAVGATSPSNASSVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDNGEFSVIERIYHSPPSVLHIHDDDDGDGDDENDNDKCEDQIEGEKGDNVDCKPKQHNINCSDKTKFEVDEKQKKTEKSSKEVSPVGSNKSNINSKFNDHIKEDNKFVDSVSISSDSGDEEEFISQEREDFQNTTEKTKKSQMSLKAMSTTAILTQSTSSLETLSPSLPTCHENDDQETNSMSSTSTYTCSSSLITSNTIQTQNSANITTNGSNRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRKSTCVPPIPLVKIEKEEAMDEYFIPTTTATNFETQLLPSSTNKDETDKLTDIPSCSNSKTTIAKTNHNMIFTNELEPDEQEDEKPDILESATDNEMNSNVLLNSSSCAINTLNSSQVTSVIRMATTSQHQTQLLQQLPLESNKNSSEAEDLSHRQRKNQSKTNSKPAVPTLLARKVPKKLVIKPKSSKTEVFPIAITANKSNKTEVDDDQEIPTTSAKARQENTNQNSIEENTLNTADVKVKSEPITSITYENQQQQQHLPYQPATSLSILEQHLSSKETIIEFKEEEKPIITEESITPTSIIKEIKVENNVNDDARVLYDFANSKKTQNETLSTFPSATSLFASKQTSIKDIRASDEEQQLTKELHHENNTTSSSSSIYSSQSAMDATMPSKEPNNTSVSAATMEQIHQQPNQAYTDFHFNYLYNNVGSNVTAVATADQTDIKNHQQFTTFYQNSTNNTMLLEDSSSSKHYTEFQQQQHQTAGTAHHHWFNNSNNYQTSETNLTPITSNHSVSLSADGNTVGMECTEVSKYLDLDSCKREQNIDVNVGDRLTVSQPPPPSSSTSCSFNGTTDNSMAGICSTGVTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHEEYFAVQDLSASTTALATSGSSNRLKSFEPNNNSSSNAMPTFFQNSNDNCNIDVMPSTSAKIRKKRKRCSQDGKTPQSNGKRMQPTSTVTSQQLLMQHQNEQSGVEFNLEHHQLQQQHHSQQQPLQQLTTSTEYLVGSSNASSSLASGLMMHQQQQNSLQQAQPEQHQPQHKQRTKVYECGHCNAKYSKLKDRNAHMIEAHNYIRQNRKLLCPTAGLATPLINSNVQDPALPTTSAAGSVLTSLQQNADCMGDYKQGIVKLENDNVQRDLADVESINANLSAKAEIIEDNKQNLDLIPINGANADGINLEYDTKPTTTSLPLSLTTPTNKLTTLYRMLVSFNMTTLKQNQSLSEFDENLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCEKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKVTYRKKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTDTQYDCAICNKSFSTKWNLKIHSWVHASRTNKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -