Basic Information

Insect: Phyto melanocephala
Gene Symbol: -
Assembly: GCA_941918875.1
Location: CALNXE010000198.1:16458-20519[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.014 1.1 10.4 2.7 2 19 454 471 453 473 0.94

2 15 0.4 32 5.8 0.9 2 23 515 537 514 537 0.93

3 15 0.24 19 6.5 0.4 5 23 547 565 544 565 0.92

4 15 0.00019 0.015 16.3 0.5 1 23 572 595 572 595 0.96

5 15 2.4e-05 0.0019 19.1 2.0 2 23 603 624 602 624 0.97

6 15 0.04 3.2 9.0 2.1 1 22 674 695 674 698 0.91

7 15 0.14 11 7.3 5.0 1 23 703 725 703 725 0.94

8 15 0.63 51 5.2 0.2 1 23 741 766 741 766 0.96

9 15 0.13 11 7.3 2.1 1 23 777 800 777 800 0.96

10 15 0.057 4.6 8.5 2.8 2 23 806 828 805 828 0.95

11 15 2.3e-05 0.0019 19.2 1.1 2 23 832 854 831 854 0.95

12 15 0.53 43 5.4 3.3 1 23 860 883 860 883 0.90

13 15 0.012 0.97 10.6 1.0 1 23 888 910 888 910 0.98

14 15 6.4e-06 0.00052 20.9 1.5 1 23 916 938 916 938 0.99

15 15 0.011 0.93 10.7 0.9 5 23 953 972 944 972 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.014	1.1	10.4	2.7	2	19	454	471	453	473	0.94
2	15	0.4	32	5.8	0.9	2	23	515	537	514	537	0.93
3	15	0.24	19	6.5	0.4	5	23	547	565	544	565	0.92
4	15	0.00019	0.015	16.3	0.5	1	23	572	595	572	595	0.96
5	15	2.4e-05	0.0019	19.1	2.0	2	23	603	624	602	624	0.97
6	15	0.04	3.2	9.0	2.1	1	22	674	695	674	698	0.91
7	15	0.14	11	7.3	5.0	1	23	703	725	703	725	0.94
8	15	0.63	51	5.2	0.2	1	23	741	766	741	766	0.96
9	15	0.13	11	7.3	2.1	1	23	777	800	777	800	0.96
10	15	0.057	4.6	8.5	2.8	2	23	806	828	805	828	0.95
11	15	2.3e-05	0.0019	19.2	1.1	2	23	832	854	831	854	0.95
12	15	0.53	43	5.4	3.3	1	23	860	883	860	883	0.90
13	15	0.012	0.97	10.6	1.0	1	23	888	910	888	910	0.98
14	15	6.4e-06	0.00052	20.9	1.5	1	23	916	938	916	938	0.99
15	15	0.011	0.93	10.7	0.9	5	23	953	972	944	972	0.89

Sequence Information

Coding Sequence: ATGAGTATCTGTTTATATTGCAAAAAAACCTCGGATGAAGATGTTAATGAGTTTCATGAAATTTATGATGAAGTGGGCCTGGAATTGCAACTACCCGCATTAGTAGAAAAAATTTTTCGTATTCAAGTGTCGAATGCAGCAAATGAACTTCTATGTGATGATTGTGTTAATCGTCTAATAGAATTGTACGATCTGGAGGAGCATGCCAAAGAAATAGCTAATAAAATTGAAGGTCCGGATACCACTATTGTTTTTACAGAGAATGATAATGGAAAAAATATGTTCAAAAAGGAGGAGGACGATGTAAACCTTCAAGATAGTGAAAACGAAAGTCTTAATAATGAAGAATATATTATAAGAAAAGGTGATTCCTCATTATCTCCTCAATATATTGAAGACGTTACGTGTGTAAATAATTCGTATGATGAATCTCCACAAGAAAACTTTATTTCTAATGAGGAAATTGAAATTGTCGAAGAACTTAATTATATAACAACTAATAGTACAAATAAACCAACAGACGACTGTGAATCTTTGAATAATGAAGTTATTCAATTTGTTGAAAATGAAGATAATAATTTAAATTTGGAAAGTCTAGTTAATGCAAATATAATAGCTACTGAAGTTTCTTTTGAGGAATTTGAAATATTAAAAGCAAGTGAACAACTGACTCTTGTCGAAGGCGATACTGATGAAAATAATTGTACCTACAATGACGTAAATACTATTGTTGAGGATGATGAATTTGTCGAAAAAGAGGTAGTTGAACAAGATTTCGGTTGTAACTTTTCGCAAAATGATGGTAATCAGAATTTAGCTCTGGAAGAAATACTTGTCGAAGAAGTCGAAAATTACGAGGAAGAATCCTTAAATATTGATGATGTGGAAAATACGCAAGACACAGAAGACAATAAGTTAGATAATATAAATCTACAAGAACCCGACTTAAAATCGAATGTACCAATAAGTGAAGAGGAGGTAGATCAAAGACAAACAATTGAAAATGATTCAGAAACCGTAGATGATACATTTTCATTAGAAGAAGAGTATTTAATTGAAGAGTTGTATTGCTCTGAGGAATATGATAGCATTGATATAAATGAGTATTTGGATAGGGTTTTATCGACAAAATTTCAAGACTTGGACTTAGATTGGGAAGTGGAATGTAAGTTGTGTCTTGGCAAATATCTTACATTTCAAGAATTATTAAGTCACGTTTGTATCACAGAATTCGAGGAGAAACAACAATTCACCTGTGTATTTAAAGATTGTGAGTGTTTTGTTTATAGTTTACCGATTTTAGCCAGACATTTTATACTGCACCATTATGACAAGTTAGAGAGCACCCCAATTTATGGCAAATGTCCAGATTGTCAGAAATCATTTTCTTTTTTTATTGATTTTAATAAACACTCATGCTGTCGAACTATAAAACGGAAAGCGGGATCACCGAATTACTGCCAGTATTGTGATATGGATTTTCAATCTTTGAAAAGATTTGTATTTCATATGCAATTTCATTTAACAAATCATCGTCCCAAGGTGTGCTTTTTATGTGGAGATTTATTTAAAACTTCCAATGATTTATTTGAACACACCCAGTATAAGCATAATCCTGATGCTGCTATGGCATGTATACAATGCGATCGTTTTTTTAAGGACAAGGATGTATTTGATAGTCACATGGACCTACATGAAGACTCAAAATATCAATTTGCTTGCGATTTTTGTCCCAAAAAGTATACCAACAAAATTGGTTTAAGTTCTCACATGAATATTTATCATAATAATAAATCCAAGACCATAAAATGCAATTATTGTAAAAAAGAGTTTGTTAATAACAATTCATATCGTAATCATATAAAATCTCATGCTAATGACGTTCAAATAGAAACATTTATTTGTACGGCTTGTGGATTAATATCAAATAGTTCTGAATTTATTAAGGAGCACCTTGAATCTGACAAGAATAAAGATTGTCTTACAGCTTCAATAGAAGAGAAAACAATAAGTTTAGGCTTTACCTGTGAAAATTGTTCAATAGATTTCCATACAATTAAGGACCTAAAAAAACATCGCTTAAGTGATAATCACAATGATGACATATTTCATTGTGGTGTATGTCGTCGGGAATTTAAAACCCTACGTCACATGCGTAACCATTCCATTAATCACAAGGATTTCGAAAAATGGGAAGAAGCTTTTCCAATAAACAGATATTTTGTTTGCAACATCGGAGATTGTGAAGAATTCTATCCAATTTGGACCACATTATATTATCACAAGAAACGTCCGCATAAAACCAAGGAAAGTGTAAAGCCCAGCGATTTTAAATGCCAATTTTGCCAGCAGTTGTGCAGTTCGAAAATGTCTTTAGCTGTTCACGTAGCAAGAAGTCATAATAATTCAAATGTCGTCTGTCCTCATTGCAAACGTGCACATAAAACCCAAAAACTTTTACAAGAACACATTGATAAATTTCATACGCCCGTTAAATGCGACATTTGTCAGAAGAATTTTAAAAATCAACGCAATCTAGAATCTCATAACCGCTTGGTTCATCTGAATATAAAGCGTTATTTTTGCAAATATTGCGAAAAGGGTTATTTTCATAAAAGCGAAAAGGATGCCCATGAGACCAAAGTTCATCCAGAATTTTCCTATCAATGTGAACTATGTAATTTTATAACCAATTATCATGAATCTTTAGAGATTCATATGGACAATCACAATAACCAGCTAAAATTCAAATGTACAATCTGCGATAGAGCATTTGGTCGAAAACAGCTATTAAAACTACATTTGAAAAGGCATGAAAATAAGAAAGAACACATTTGCCGCAATTCAATTGTTAATGGTTGTGACGCATCTTTCTACACCTATAATATGCTGAAAACGCATATTCAAACTAAACACGATGGATCAAAATTTAAAAAAGCAACAGGCAAATATAAAAGGAAGTCAAAAAAAGATCTTGAAGTTGAGCTTGTACAGATCGAGAAAGATTCCTTTGAAATCTTAGATTGCAATGCGGAAAGTTCGCCTGCGAAACGTTTAAAAAAGAGTAACGACGGTATGAAATACTACAACGATGACGATATTATTGAATTCGTACTGCAATCAGATGGGCAAATAACCGATAATCAATATGTAATCTAA
Protein Sequence: MSICLYCKKTSDEDVNEFHEIYDEVGLELQLPALVEKIFRIQVSNAANELLCDDCVNRLIELYDLEEHAKEIANKIEGPDTTIVFTENDNGKNMFKKEEDDVNLQDSENESLNNEEYIIRKGDSSLSPQYIEDVTCVNNSYDESPQENFISNEEIEIVEELNYITTNSTNKPTDDCESLNNEVIQFVENEDNNLNLESLVNANIIATEVSFEEFEILKASEQLTLVEGDTDENNCTYNDVNTIVEDDEFVEKEVVEQDFGCNFSQNDGNQNLALEEILVEEVENYEEESLNIDDVENTQDTEDNKLDNINLQEPDLKSNVPISEEEVDQRQTIENDSETVDDTFSLEEEYLIEELYCSEEYDSIDINEYLDRVLSTKFQDLDLDWEVECKLCLGKYLTFQELLSHVCITEFEEKQQFTCVFKDCECFVYSLPILARHFILHHYDKLESTPIYGKCPDCQKSFSFFIDFNKHSCCRTIKRKAGSPNYCQYCDMDFQSLKRFVFHMQFHLTNHRPKVCFLCGDLFKTSNDLFEHTQYKHNPDAAMACIQCDRFFKDKDVFDSHMDLHEDSKYQFACDFCPKKYTNKIGLSSHMNIYHNNKSKTIKCNYCKKEFVNNNSYRNHIKSHANDVQIETFICTACGLISNSSEFIKEHLESDKNKDCLTASIEEKTISLGFTCENCSIDFHTIKDLKKHRLSDNHNDDIFHCGVCRREFKTLRHMRNHSINHKDFEKWEEAFPINRYFVCNIGDCEEFYPIWTTLYYHKKRPHKTKESVKPSDFKCQFCQQLCSSKMSLAVHVARSHNNSNVVCPHCKRAHKTQKLLQEHIDKFHTPVKCDICQKNFKNQRNLESHNRLVHLNIKRYFCKYCEKGYFHKSEKDAHETKVHPEFSYQCELCNFITNYHESLEIHMDNHNNQLKFKCTICDRAFGRKQLLKLHLKRHENKKEHICRNSIVNGCDASFYTYNMLKTHIQTKHDGSKFKKATGKYKRKSKKDLEVELVQIEKDSFEILDCNAESSPAKRLKKSNDGMKYYNDDDIIEFVLQSDGQITDNQYVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -