Basic Information

Insect: Phyto melanocephala
Gene Symbol: wdn
Assembly: GCA_941918875.1
Location: CALNXE010002001.1:59179-63123[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.3e-05 0.001 20.0 0.8 1 23 322 344 322 344 0.99

2 7 0.092 7.5 7.8 1.8 2 23 356 376 355 376 0.93

3 7 4.3e-06 0.00035 21.5 1.0 3 23 384 404 382 404 0.98

4 7 3.4e-05 0.0027 18.7 5.1 1 23 410 432 410 432 0.98

5 7 0.00033 0.027 15.5 3.0 1 23 438 460 438 460 0.97

6 7 8.1e-06 0.00066 20.6 0.8 1 23 466 488 466 488 0.96

7 7 0.00015 0.012 16.6 2.3 1 23 494 517 494 517 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.3e-05	0.001	20.0	0.8	1	23	322	344	322	344	0.99
2	7	0.092	7.5	7.8	1.8	2	23	356	376	355	376	0.93
3	7	4.3e-06	0.00035	21.5	1.0	3	23	384	404	382	404	0.98
4	7	3.4e-05	0.0027	18.7	5.1	1	23	410	432	410	432	0.98
5	7	0.00033	0.027	15.5	3.0	1	23	438	460	438	460	0.97
6	7	8.1e-06	0.00066	20.6	0.8	1	23	466	488	466	488	0.96
7	7	0.00015	0.012	16.6	2.3	1	23	494	517	494	517	0.98

Sequence Information

Coding Sequence: ATGAAAGAAGAAGCAGAGACAAGTAGTAAATTGCCGCCTAAAATAATAATGGGTGGTGTTGGCGGTCCATCAACAATTGCAAATACAATGATAAAAACAACAAGTTCAGCTACTTTTCCTTATCTCAATTCTATAACCCTTAACTCCACTCTGAATCCTAGTACACCTAGTAAACAGCAAAATGATGAGATATTAAGCACGTTACTGCGAATGAACAACTTCGATTCTATATCTAGCATAAAAGATGAGTCTCTAGATATTGATCTATCCGCATGTGTAACCATCAGTGCTGACACTTCTGGTATAAGCAATAGTTTTTCATCATCTGACTTTTGGCGGGTGTTGGATGAAAGTGCTCAGATTTCTCAGTTGGATGTAAGTAATAGTAGTGTTAACCTCTTAGGTGGTATTTGCGGTACGAGCCGCGAGTCTATACAGACTTCACCTACCACATCGATAAATGGCAGTTGTATTTCGGCAAATGAAAAAAACGATTTAAAGTTCGTTAAGAAGGAACAGACCGATTTTAGTGGGACTTTTCTTAAGCCGTCAGTTGGTATTTCATTTTCACCTTTAAAACGTAATATTAAGCCTCTACAACCCGAGCAACAAATACGCAAAGAAAAATCTCCAACTAGATTAACCAAGTTGGATAAAGGACCTCCTTCTTTAGCACCAATAATGCGTATAAATCAAACGTTCATTAAACCTCAGGCGGAAGTGTCAAAGTTAAATAATGGCCTTTTATCCACAAATCAAACGGTAAAAGTTCAAAAACAAAAACAGTTATTGTTGGTCTCCAATCAACCACCGCCGTTGGCTACTTTAGACTCTGCGTCACAAAAAGAATCGACGGTAAAGACCTTACCTTTACCCGAACCTATGTATAAATGTCTTGATTGTGAAAATCAAATATTCCGTGGTATTCAGGAGCTGGTCAAGCACAATAACCATCATATAATTTACAAATGTCCGGATTGCGAAAGAGAATTTGATCTGGAAACGTCGTTAAAGAAACATCTAAAAACGCATCGCCCTATTGATGCTCGTAAAGATGCTTGGAAAAAGTGTCCCGATTGTGGAAAGTGCCTTAAACTTGGAAGCATGTGGATGCATCGTAAAATTCATACTGAAAATAAAAAATACGGCTGTGAGATATGTGGTCAGAAATTTGTTCAGAAGATAAACCTAACACATCACCAACGTATACATACCTCCGAAAAACCGTACGAATGTTCCGAATGTCAAAAACGTTTTCAAGAGCGCAGTCATCTACAACGGCACCAAAAATACCATGCACAAACACGTTCATATCGTTGTGAAAAATGTGGTAAAATGTACAAAACTGAACGCTGTCTAAAGGTCCACAATTTAGTTCACTTAGAACAGAGGCCATTTGCATGCACTGTCTGCGATAAGTCATTCATTTCGAATTCTAAACTTAAACAACATTCGAACATACACACGGGAGAGAGACCATTTAAATGCAATTATTGCCCTAGAGATTTTACAAACTTTCCCAATTGGCTAAAACATACAAGACGTCGTCATAAAGTCGATCATAAAACCGGTGAAATGTTGGAAAATATACCATCGTATTGTTCAAAAAAATCTACACGTACACCAAAGGAAAAGAAAACTCCCGAAGTGAAGGCTACAGCAACTGCAGCAAACAACATAAATAGTAACAGCAGCAAAAGTAACACTGGAGTGACTACTAATCAGAAGCCTACTGATCTCAAAAAAATTGATACAAATGAACTACAGCAGCAGCAAAAACAATTGCAAATATTGACAACTTTTTCTACTGCAATAACCACTACTAGCACAACATCGGTTAACACTATTCCCACTACGGTGTTCACTACCGTAACTATTGCAAAACCTTTGGTTACGGTAGCATCTACTACAAGTAGGAACAACCAGTTAAGCACACTTAGTCGTCCACCCCCATTAGCTAAAGTGCCGGCGAAACGTAAAAAGAAGCAGAGTTTAGTTGAAACGCAAATAAAAAAATCCGATTGTTTTGCTGCAACTACGACAACTTCTACGACACCGTCAACTGCTAATTTTATAATCACTACAACCCCAGTTGTCACATCTAGTAACACAGGTCCACCCCCACTGGCTTTGGTGTATAATACTAAACCCATAAATGTGATCAGTACAACATTGACGGCAAATAATGCTACGAATACTAAAAAAATATCACATCAACCCCAACAGCATCAACAATTAATAAAGCAACCATTAAAAATGGAAAAAATTAAGAGGGAAAGAAAACAACCTATGCCAAAGCAAGTCCAGCAAGTACCGCCACCGTTGGTTATAAAAAAGGAATTTATAGAACCAAAATCGGAATTAAATATTGTAAATCATGAGCAACAACAGCAGCGGGTACTGCAACAACAACAATCTCTGCAACAACACCAACAACAGACCAAAGTATCATTCACCGACTTACATTGCTTAAGTATTACCTCTGCCGAGGAATTGATCATGGAACAGGCTCTTGAAATGGAGGAGTGCGGTCTGTACAAAGCCACATTACCTACTAATGCTACAGATAGTGTTATGTCCAATTTTGCCGATACCGATAATGCCATATCATCGGATTCTATGGCTAACCTACATTTTAAAATCAAAGAAGAACATCACGATATGGAATTAAAATTGAAAACTGAAGAATTTGATTCTATCAAACACTCCATATGCTCTTCACTTGAATCCTCACCATTTTCATCACCTGCCTCTATGGAATTTGCAACGTCATCAACTTTAACAACCGACTTCACAAGAAATAATTTTTACTTACCTCCCTTTACGATTACCAATAATCAAATAAATACAACAAATGCACCTCTAACCACAATGAGAATTGAAGATTTTCGAGGTACTGTCGCAACGGCACACAGTTTTTTACCACAATTGATAACTACAAATGTCAGTGTTCCCGATTTGATACAAATTAACAATAACAATCAAAAATTTTTAAAAGCCACTTCTGCTGCAAGCAGTAATAGTAATAGTATTGGTGGCGAAATTGCGACAAGTCCTTCATTTTTAAACCAACTATACTTGCCATTAACGGTTAATGCAGGACCCGTTCTAATGAAATCAAATCAAGCATTACCTTCCGTTGATACTCTATTGTTTTCAAATTCCAAATTGGGCGGACTCTTCAACAGTCGCAATTTACCAAAACAAGCCACAACAGCTCAACACAATTTATCCTAA
Protein Sequence: MKEEAETSSKLPPKIIMGGVGGPSTIANTMIKTTSSATFPYLNSITLNSTLNPSTPSKQQNDEILSTLLRMNNFDSISSIKDESLDIDLSACVTISADTSGISNSFSSSDFWRVLDESAQISQLDVSNSSVNLLGGICGTSRESIQTSPTTSINGSCISANEKNDLKFVKKEQTDFSGTFLKPSVGISFSPLKRNIKPLQPEQQIRKEKSPTRLTKLDKGPPSLAPIMRINQTFIKPQAEVSKLNNGLLSTNQTVKVQKQKQLLLVSNQPPPLATLDSASQKESTVKTLPLPEPMYKCLDCENQIFRGIQELVKHNNHHIIYKCPDCEREFDLETSLKKHLKTHRPIDARKDAWKKCPDCGKCLKLGSMWMHRKIHTENKKYGCEICGQKFVQKINLTHHQRIHTSEKPYECSECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEMLENIPSYCSKKSTRTPKEKKTPEVKATATAANNINSNSSKSNTGVTTNQKPTDLKKIDTNELQQQQKQLQILTTFSTAITTTSTTSVNTIPTTVFTTVTIAKPLVTVASTTSRNNQLSTLSRPPPLAKVPAKRKKKQSLVETQIKKSDCFAATTTTSTTPSTANFIITTTPVVTSSNTGPPPLALVYNTKPINVISTTLTANNATNTKKISHQPQQHQQLIKQPLKMEKIKRERKQPMPKQVQQVPPPLVIKKEFIEPKSELNIVNHEQQQQRVLQQQQSLQQHQQQTKVSFTDLHCLSITSAEELIMEQALEMEECGLYKATLPTNATDSVMSNFADTDNAISSDSMANLHFKIKEEHHDMELKLKTEEFDSIKHSICSSLESSPFSSPASMEFATSSTLTTDFTRNNFYLPPFTITNNQINTTNAPLTTMRIEDFRGTVATAHSFLPQLITTNVSVPDLIQINNNNQKFLKATSAASSNSNSIGGEIATSPSFLNQLYLPLTVNAGPVLMKSNQALPSVDTLLFSNSKLGGLFNSRNLPKQATTAQHNLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01162507;
90% Identity: -
80% Identity: -