Basic Information

Insect: Phyto melanocephala
Gene Symbol: -
Assembly: GCA_941918875.1
Location: CALNXE010004319.1:12075-45431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00082 0.067 14.3 1.2 1 23 130 153 130 153 0.95

2 18 0.17 13 7.0 2.4 1 23 429 452 429 452 0.95

3 18 2.2e-05 0.0018 19.2 2.2 1 23 458 481 458 481 0.98

4 18 0.00014 0.011 16.7 2.7 2 23 503 524 502 524 0.97

5 18 0.03 2.4 9.4 0.9 1 23 601 624 601 624 0.96

6 18 0.001 0.084 14.0 0.6 2 23 632 653 631 653 0.97

7 18 6.1 5e+02 2.1 0.6 2 19 662 679 661 681 0.76

8 18 0.00011 0.0093 17.0 4.5 1 23 697 719 697 719 0.99

9 18 0.005 0.41 11.8 1.1 1 23 831 854 831 854 0.96

10 18 0.0003 0.024 15.7 0.4 1 21 861 881 861 882 0.95

11 18 0.036 2.9 9.1 0.8 2 23 894 916 893 916 0.94

12 18 5.1e-06 0.00041 21.2 1.5 1 23 931 953 931 953 0.98

13 18 1.2 99 4.3 2.4 1 23 1098 1122 1098 1122 0.97

14 18 0.085 6.9 7.9 0.2 1 23 1159 1182 1159 1182 0.95

15 18 3 2.4e+02 3.1 5.7 1 23 1192 1215 1192 1215 0.94

16 18 0.00041 0.033 15.2 2.1 1 23 1222 1244 1222 1244 0.95

17 18 0.22 18 6.6 0.2 2 20 1271 1289 1270 1291 0.90

18 18 0.0002 0.017 16.2 3.5 1 23 1344 1367 1344 1367 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00082	0.067	14.3	1.2	1	23	130	153	130	153	0.95
2	18	0.17	13	7.0	2.4	1	23	429	452	429	452	0.95
3	18	2.2e-05	0.0018	19.2	2.2	1	23	458	481	458	481	0.98
4	18	0.00014	0.011	16.7	2.7	2	23	503	524	502	524	0.97
5	18	0.03	2.4	9.4	0.9	1	23	601	624	601	624	0.96
6	18	0.001	0.084	14.0	0.6	2	23	632	653	631	653	0.97
7	18	6.1	5e+02	2.1	0.6	2	19	662	679	661	681	0.76
8	18	0.00011	0.0093	17.0	4.5	1	23	697	719	697	719	0.99
9	18	0.005	0.41	11.8	1.1	1	23	831	854	831	854	0.96
10	18	0.0003	0.024	15.7	0.4	1	21	861	881	861	882	0.95
11	18	0.036	2.9	9.1	0.8	2	23	894	916	893	916	0.94
12	18	5.1e-06	0.00041	21.2	1.5	1	23	931	953	931	953	0.98
13	18	1.2	99	4.3	2.4	1	23	1098	1122	1098	1122	0.97
14	18	0.085	6.9	7.9	0.2	1	23	1159	1182	1159	1182	0.95
15	18	3	2.4e+02	3.1	5.7	1	23	1192	1215	1192	1215	0.94
16	18	0.00041	0.033	15.2	2.1	1	23	1222	1244	1222	1244	0.95
17	18	0.22	18	6.6	0.2	2	20	1271	1289	1270	1291	0.90
18	18	0.0002	0.017	16.2	3.5	1	23	1344	1367	1344	1367	0.97

Sequence Information

Coding Sequence: ATGAATGAACATCGAGTAAAAACTCAACAATGTGATTATCGTTATCGTCGTTTTATATGGCCAAATAGTCTATGGAAACATAAAGAAATGCAGAAAAAAGTTTTTCTTTCACATTTTATAATTTTATTTTGGCATCGCATGGAAATGCACTCTTTTACCAGCATTGCGGTAGACTCTTGTTTAATTGACCTTAACTTACATAATGGATCAATGGCCGTTGGTAGAGAAATTGCTAATCGACCTTTACCATCCAACAACAAAAGCGATGCCAATGTTTTAGAATACATAGACTCGGAAATTTTTCAAAACAAAATAAATCCATTACAGGAACACAATATGAACATTCTAAAAGCTTGCGAAGAACCCAAATCAAATTCAGCAAAGAAATTCTTATGTTTCATTTGCAAGGTCTCATTTACCAACAATTTAAATCTTTCAAATCACATAAGTACACGACACACAAATCCTTTAAAGTGTAGTCATTGTAAAGTAAAACCATCAGAATGCAACGTCACAGCAGCAACAACAGCATTATCAACAGAAAATTATACAAATATGACAGATAAGTCTAGACGCAAATCAACTTCACCCGTGCCACCTTCCGAAAAATCTGATTCAAGTGATTTTGAATTGGTTCATTCATTGCCATTTGAATCATCCAAAGCTAATAATAGCAATGTGTCAAAGTGCTGGGATTTAAATTTGTCTAGCGATTATTCAACTTCTTCCCCCTTAGATGCTAAGTATGCAGTTAAAGAACAAAAAATAAAAGTTGTGCCTACTGGTTCTGCTGGTGGGAATTTGACAACTTCTGCAAAGGAAGAAAATAAAATCAAAGACAAAACAAGCAAAGGTAACGAACGTAATCTGACCAATAATATTACGCCTACTGCAACAATACAAATTGAAAAATCGGATAAAATTCATACCGTAAATAAGAAATATTCCCAAATATTGGCAAGTTGTGAAGATCCATTACAACATAGAAATTTGAGTGGAAATGAAAATGTTACCGAATGGTCTGCTAATGAGCTGCCATTGGAACAGGAATTATCGGTAGTTAAACTAGAAAAAGAACATATTGTTGAATATGACATTATTTTGAACGACATCGGCAAGAAATTTTACAAAGACACCGAAGCAAAATATGAAAATATATGCACAGATTATAAAGGGGATCTAAAAAAAACATCAATTTGTGGCAATAAAAGAAAACCCGTAGAAAGAAAGAGGGGTCGTAAAGCTCCTGATTATTATGAACATATTGAAAAGGTTAAAGATCGTTTTGTATGCCTCATATGTCAAAAAAAATTTTATTATAGAAAAGATTGTGGTAGACATATAGCTACAATACATTTGCTTAAAACAATGTATCAATGCGAATTCTGTGGACAAGATTTTAGATCAAAAGATTATTACAAAGCTCATATAAAACGAAAACATTCAGGTAATTTACTGTTTGGAGAACGTTTATACAGCAAGCCGGTTGCTGCTTGGCGACATGTTGAATGTAAATTATGTAACACTAAATTTAAAACAAGAAAAGAACTTCGTCAACATTTGAAAAATCATAGTAATGTTCACACTCTACATGGCTTAAATATTAACAGTTACATTATACAACATTTGTTTCCAAATGCAAGCGATTTAAACTTTATTAAGAAAAGTATATGCAGTGATATTAGTAAAAAAGACTGGTTTAAATACTATACAGCATTAAATGAACATTCGTTTGAAATGTCTATTAGCGATACAGAAGTAGAAGATTTAGAAGAAGAAACAACAAAAAGTACCAGTAAATATAAGTGTGTTTTATGTGCTAAAGAGTTTTCTTTTAAATATCAAGCTTTCAGTCATTTAAAAGAGGCTCACGTCAGTGACACAATTACTTTAAAATGTGACATATGCAAGTTGGAATTTATTTCTGTTAAAATGTATGAAAAGCACTTACGAACTCACTGTAATAATGAACATAAAATTTTAGTTTGTCCTCACTGTCCGGCAAAATTCGTGTGGCCTGAAAATATAAAATATCACAATTGTGCAATCAAAATTATTGCAACATCACAGGATGAAAATAAAGCAAAATTCAAATGCCATAAATGTGATCGAAAATTTGTGCTGAAAGCTAATTACAAAAATCATTTGGAGACACATAATAAAAACAGGACCATACATGCAAAAAATATAATACGTTGTTCTCTTTGTACATATTCTTGTTTAAAGCTGCGACATTTACGAGAACATATGCCCTTGCATTCTGATGGCAAGACTGGTATTGATTTTGATGGATGTAGTTATATAAAACAGTTTAAATGCTCGGAGACAACTGAAAATGGGTTACTGCAGAAGGAGATACTTAATGCCTATAGTAAATCTCAAATTAGTCACTTTTATCGAGCAATCGACAAGGACGGCAATGAATTGGATATTTTCGATTCTGATAGCGATACGGAGGAAGATGTTGGTGAAGAAATTTTAAAAGAAGGATACAGATGTGAACTTTGCAATATAGTTTTAAAAAAACGAAAACTTCTTTTGAAACATCAACAAGAACGCCACAATGATGCGGTATTGCCCTATAAATGTAAGGAGTGTACCCAGGAATTCGTTAGTAATGACTTGTTACAACAACATTTGACCAGAGATTGCTGGAATGAACAACGACGAACAGCTCAAAAATGTGATCACTGTCATGCACGCTTTATATGGCCATATAATTTGATAATACACATAGAATTACAGCATAAAAATCAAGAAGCAACCAATGCCTTCTCTAAAGACAAAATATTTTCCTGTCTGTACTGTGATCGACGATTTCAGCGAAAACGAAATCTGCTGGCTCATATAAGAATACATAGTCTAGACGACATTCCGACATTCTCAAATCATATTAAAAGTATCGACTATATACTACCACATTTACTCAAACCGCATGGCTGCAAACGTATAAAGTGCATGGTGTGCTTTTCCGAACACAGTCGTATACGTGACTTAAGGACCCACTTACAAACACACCGTTATGCAGTTAATTTTGATAAAAGAAAAGAAATCGAAACTATTGATGCAATATCATCCCAACTCTATCCCGATGAATCGGTGACTATATCGGAAGAAGAGTTAGTGAAACGAATTGGAAATGATGTTTTGGCAGAAAACAATTTAGAACGATTTTACTCTATAACAAGTGAACACGGCCATGAAGTTAACTTAGATAGTTCTGAAACAGAAAGTGATTCTGACGATAACGAAAACGATAAAGAAGAGCGTATTGATATTTCAAAACGTATTTATAAATGTGATTTGTGCCCGCAATTGAATTTTAATCGTAAATACAAAATTTTCGATCATCAAAATAAAAAACATAAGTGGCAGGAAGCCCGTCATATTTGTATTTTTTGCAATGGGCGATTTCTTTCATCAGATATTCTGCAATTACACTACAAGAATCAATGTAAAAATACTGAAAAGCTTTATTATTGTCGTTATTGTCCTTTGCGTTTCATGTGGGAAAGCAATATGAAGGCTCATATAACAATAGTTCACAGCCAAGAGATAAATTCATATCGTCGTTATAAATGTATACACTGTCAAGAAAGGTTTCCCAGCCAAAAAGATCTTAAATGTCATTTGACCAAACAACATTCTGAGATTGATTCGTTTCATTTTTGTCTTTTGTGTCCAAAAACGTTTATAAGCAGTAAACTTCTCAACGAACATTTAAGGCAGCATCGTTTAACTATATTCGAAGCCAAGGCCGCTGAAAGTATAATACATTCGACATGTTGTCCAAATGGTGAAAAAACAATTAAATGCAAATTATGTGGCCAATTCTTTGGAACTGTGGCCAAATTGAGCGAACATTTTTTATCTAAAAAACCCTTTAATATGTGCGCAGGTCAACATGCACTAGCAAATTACTCGATAACCAATCAAAAAGGTTTCGAACTGCATTTAGAATTGGATTCAGAAACAGAATTAGAAGATGATGTGGGATATAGTAGAGAAAACAAAATGATTTCATATTCTTATAATTGTTGCATATGCAATATGTCATTTAAGCGAAAATATCAAGTAGCTCAACACCAACGTTCTATACATAATTACAAAGAACTAGAGCTTAAATGTGAACGCTGCATTTTTAGAACTGTCTCACAGaaaattttagattatcataaaagcacacagtgtttcaatgatgataaacaatacgaatATGAAAGAATGGAACTGCCTGAATCTGGCGCAGGTATGCATACTTAA
Protein Sequence: MNEHRVKTQQCDYRYRRFIWPNSLWKHKEMQKKVFLSHFIILFWHRMEMHSFTSIAVDSCLIDLNLHNGSMAVGREIANRPLPSNNKSDANVLEYIDSEIFQNKINPLQEHNMNILKACEEPKSNSAKKFLCFICKVSFTNNLNLSNHISTRHTNPLKCSHCKVKPSECNVTAATTALSTENYTNMTDKSRRKSTSPVPPSEKSDSSDFELVHSLPFESSKANNSNVSKCWDLNLSSDYSTSSPLDAKYAVKEQKIKVVPTGSAGGNLTTSAKEENKIKDKTSKGNERNLTNNITPTATIQIEKSDKIHTVNKKYSQILASCEDPLQHRNLSGNENVTEWSANELPLEQELSVVKLEKEHIVEYDIILNDIGKKFYKDTEAKYENICTDYKGDLKKTSICGNKRKPVERKRGRKAPDYYEHIEKVKDRFVCLICQKKFYYRKDCGRHIATIHLLKTMYQCEFCGQDFRSKDYYKAHIKRKHSGNLLFGERLYSKPVAAWRHVECKLCNTKFKTRKELRQHLKNHSNVHTLHGLNINSYIIQHLFPNASDLNFIKKSICSDISKKDWFKYYTALNEHSFEMSISDTEVEDLEEETTKSTSKYKCVLCAKEFSFKYQAFSHLKEAHVSDTITLKCDICKLEFISVKMYEKHLRTHCNNEHKILVCPHCPAKFVWPENIKYHNCAIKIIATSQDENKAKFKCHKCDRKFVLKANYKNHLETHNKNRTIHAKNIIRCSLCTYSCLKLRHLREHMPLHSDGKTGIDFDGCSYIKQFKCSETTENGLLQKEILNAYSKSQISHFYRAIDKDGNELDIFDSDSDTEEDVGEEILKEGYRCELCNIVLKKRKLLLKHQQERHNDAVLPYKCKECTQEFVSNDLLQQHLTRDCWNEQRRTAQKCDHCHARFIWPYNLIIHIELQHKNQEATNAFSKDKIFSCLYCDRRFQRKRNLLAHIRIHSLDDIPTFSNHIKSIDYILPHLLKPHGCKRIKCMVCFSEHSRIRDLRTHLQTHRYAVNFDKRKEIETIDAISSQLYPDESVTISEEELVKRIGNDVLAENNLERFYSITSEHGHEVNLDSSETESDSDDNENDKEERIDISKRIYKCDLCPQLNFNRKYKIFDHQNKKHKWQEARHICIFCNGRFLSSDILQLHYKNQCKNTEKLYYCRYCPLRFMWESNMKAHITIVHSQEINSYRRYKCIHCQERFPSQKDLKCHLTKQHSEIDSFHFCLLCPKTFISSKLLNEHLRQHRLTIFEAKAAESIIHSTCCPNGEKTIKCKLCGQFFGTVAKLSEHFLSKKPFNMCAGQHALANYSITNQKGFELHLELDSETELEDDVGYSRENKMISYSYNCCICNMSFKRKYQVAQHQRSIHNYKELELKCERCIFRTVSQKILDYHKSTQCFNDDKQYEYERMELPESGAGMHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -