Basic Information

Insect: Phyto melanocephala
Gene Symbol: -
Assembly: GCA_941918875.1
Location: CALNXE010004480.1:62553-64631[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0021 0.17 13.0 3.9 1 23 367 390 367 390 0.98

2 9 0.00047 0.038 15.1 0.2 1 23 397 420 397 420 0.96

3 9 0.00016 0.013 16.5 0.3 1 23 427 452 427 452 0.94

4 9 8.4e-08 6.8e-06 26.8 1.3 1 23 461 484 461 484 0.98

5 9 0.00042 0.034 15.2 3.1 2 23 502 524 501 524 0.95

6 9 0.00024 0.019 16.0 0.2 1 23 530 552 530 552 0.98

7 9 5.7e-05 0.0047 17.9 0.1 3 23 559 580 558 580 0.96

8 9 5.9e-05 0.0048 17.9 3.9 1 23 586 608 586 608 0.97

9 9 7.3e-06 0.0006 20.7 1.1 1 23 614 636 614 636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0021	0.17	13.0	3.9	1	23	367	390	367	390	0.98
2	9	0.00047	0.038	15.1	0.2	1	23	397	420	397	420	0.96
3	9	0.00016	0.013	16.5	0.3	1	23	427	452	427	452	0.94
4	9	8.4e-08	6.8e-06	26.8	1.3	1	23	461	484	461	484	0.98
5	9	0.00042	0.034	15.2	3.1	2	23	502	524	501	524	0.95
6	9	0.00024	0.019	16.0	0.2	1	23	530	552	530	552	0.98
7	9	5.7e-05	0.0047	17.9	0.1	3	23	559	580	558	580	0.96
8	9	5.9e-05	0.0048	17.9	3.9	1	23	586	608	586	608	0.97
9	9	7.3e-06	0.0006	20.7	1.1	1	23	614	636	614	636	0.98

Sequence Information

Coding Sequence: ATGATAACTTTAACAAAATATAATGCCAAGGAGAGGTGCCGCACCTGTTTATGTAAACTTTTAAAAGATGAAGAGAAAACCAATAATGATGTGTCTTTTGTAAAATCTTATTTAAACAAGTTTGTTGATATCAAATCAAACAACGAAGTACAAGAATTGCTCGAGAAATATGTGTTCATGGATAGTGGAATTGATTTGTGCAATGATGAGTCCTATCCGCAGTACGTATGCATGGTGTGCTTCAACCTCTTGAAAGAATTTGAAATATTTCGTAACAAGGCATTGGTAAGTGCCAAGAAACTTCACAGTGTCTTCAATGCCAATAGCAATCTTCAAAAAATAGAACTGAATGACGATACGTTGGAATGTAAAGAAAATGGTATAGTGGAGCGTGACTGCGTTAAAGATGATATCTTTAATTTATTTTTAAAAGATTCATTGATGGAAACCGAAGCAATTATTTTACATGGGCCTGATAACAATAATGACTTTAAAAGTACAGATCCTGACCCATTTCAAAATACACAAAATCAAGAAAAATTGAGAAAACCAAGATCACGAAGAACTAAAGAAAAAAGTAGATTCTCTGTTAGCAGTAAGTTGAACTGCCGTAAATCAAAAAAAAATAATACTGCAGATGAAAGTGAAATTGCACAGGAAACAAAAGTAAAGGTAGTTCAGCAAAATAAAAAATCGTGCCTTGATGAAAGCTGCGATTTGCAGGACAGTACATTTCAAGATATTAGTGGCGATGATAATTCGTCCGACAATGAAGTATTAAGTAATAAAATTCTACATTCCGACACAAAAACTAAAGAAAGAAATAAGTTTAGGATATGCAAAGTTAATTTAGATAATCCAGAATTCATTATTGAAAGGCATGATGAAGAAGACTTAAAGGAAAATTTAGGTACAAGTTTAACATTTAAAGAAACACAATATCTAGAAACTATAAAAACTGAAGCAGATTATGATAACGAAACTTCCACAGACACAGAGTTCAATAAAAAGACAGATTCAATAAAACTGAATTTAGAGAAAAAGAAGAAACGTCACTATATTTTGAACAGCGGACGTAAAAAAGGTTTAGCCAACAGATACAAGTGCGACCAATGTCAGCACAAATTTGGTCATAAACTAACCTTAGAGGCACACGTCCGTAAAGTACACGAAGGACAGAAGAAGGCCTTTAAGTGTCAACTATGTGATAAGGCCTATTCGTTTATAGGAGGTTTGTCAACGCATATCAGGGATGTACATGAACGAAAGCAGGATTCGTATGATTGTAATGTGCCAGGCTGTGATAAAAAGTACAGTAACTTAATAACACTCCAACGTCATGTGCGTTTGAAGCATTTAAATATAGAAACAACACATCAATATGTTTGTGAGCAATGTGGAGCCACATTTAAGCAGAGTTCTAATTTGCGGTACCATATGAAAACTCGTCATCCAACTGAAGAAGATTTAAAACGTAAAGAGCTATTACCTAAGGATCGCTTGGAGTGTGAAGAATGTAAAAAATCGTTTCATTCTCAATACACCCTTAAATATCACAAACTACGAGTACATGCTGATGAGAAGAAATTCGAATGCAAAATCTGTGGTCGTCGGGTAGCCAAACAGTTTATGTTGGACTCTCATATGCTTGTACATTCAGATCAAAAAGTAGCTTGTAAATTCTGCGGTCGAGAGTTCGTTCGAAAATATCAGGTAGAAGCTCACATAAGAGCGGTACATCAAAAACTAAAACCGTTTCAATGTCCACATTGCAGCGAAAGCTTCGCATCACGTAAAACATTACGACATCACGTATACATACACACCGGAGAAAAGCCATATGTATGTGAAATATGCGGGCAAGCTTACCGTCAGCCAACCTGTTTAAAAAATCATCGTAAAATTCACACTAAACTTGGGACAAATAATGCGTCGGCTTCAGCTTTATCTTCTAATCGCAATTTTTTGAATAATTTTGCAGAAAATAACGATGATGCTTTTGCGAATGGGGAGGAGAATTAA
Protein Sequence: MITLTKYNAKERCRTCLCKLLKDEEKTNNDVSFVKSYLNKFVDIKSNNEVQELLEKYVFMDSGIDLCNDESYPQYVCMVCFNLLKEFEIFRNKALVSAKKLHSVFNANSNLQKIELNDDTLECKENGIVERDCVKDDIFNLFLKDSLMETEAIILHGPDNNNDFKSTDPDPFQNTQNQEKLRKPRSRRTKEKSRFSVSSKLNCRKSKKNNTADESEIAQETKVKVVQQNKKSCLDESCDLQDSTFQDISGDDNSSDNEVLSNKILHSDTKTKERNKFRICKVNLDNPEFIIERHDEEDLKENLGTSLTFKETQYLETIKTEADYDNETSTDTEFNKKTDSIKLNLEKKKKRHYILNSGRKKGLANRYKCDQCQHKFGHKLTLEAHVRKVHEGQKKAFKCQLCDKAYSFIGGLSTHIRDVHERKQDSYDCNVPGCDKKYSNLITLQRHVRLKHLNIETTHQYVCEQCGATFKQSSNLRYHMKTRHPTEEDLKRKELLPKDRLECEECKKSFHSQYTLKYHKLRVHADEKKFECKICGRRVAKQFMLDSHMLVHSDQKVACKFCGREFVRKYQVEAHIRAVHQKLKPFQCPHCSESFASRKTLRHHVYIHTGEKPYVCEICGQAYRQPTCLKNHRKIHTKLGTNNASASALSSNRNFLNNFAENNDDAFANGEEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01201837;
90% Identity: iTF_01201837;
80% Identity: iTF_01201837;