Basic Information

Insect: Phyto melanocephala
Gene Symbol: -
Assembly: GCA_941918875.1
Location: CALNXE010002436.1:5255-15698[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.099 8.1 7.7 3.4 1 23 229 252 229 252 0.96

2 25 0.0012 0.097 13.8 1.9 1 23 298 321 298 321 0.96

3 25 0.024 2 9.7 3.2 1 23 327 350 327 350 0.97

4 25 0.00026 0.021 15.9 0.9 2 23 381 402 380 402 0.97

5 25 0.0034 0.28 12.3 2.7 1 23 479 502 479 502 0.96

6 25 0.053 4.3 8.6 0.7 2 23 510 531 509 531 0.97

7 25 0.022 1.8 9.8 0.8 2 23 576 597 575 597 0.97

8 25 0.00099 0.081 14.0 1.6 2 23 610 631 609 631 0.97

9 25 0.0012 0.1 13.7 1.6 1 23 703 726 703 726 0.96

10 25 0.0019 0.16 13.1 0.9 1 22 733 754 733 754 0.95

11 25 1.5 1.2e+02 4.1 1.1 2 23 766 788 766 789 0.94

12 25 0.00054 0.044 14.9 3.6 1 23 797 819 797 819 0.98

13 25 0.0005 0.041 15.0 0.2 2 21 846 865 845 866 0.93

14 25 0.086 7 7.9 7.4 1 23 922 945 922 945 0.98

15 25 0.17 14 7.0 0.9 1 23 982 1005 982 1005 0.94

16 25 0.95 77 4.6 0.0 2 23 1054 1074 1053 1074 0.95

17 25 2.7e-05 0.0022 18.9 0.3 1 23 1080 1102 1080 1102 0.99

18 25 0.0001 0.0082 17.2 6.8 1 23 1108 1130 1108 1130 0.95

19 25 7.6e-05 0.0062 17.5 1.5 1 23 1136 1158 1136 1158 0.98

20 25 6.9e-06 0.00056 20.8 0.4 1 22 1164 1185 1164 1188 0.91

21 25 9.3e-06 0.00076 20.4 1.0 3 23 1216 1236 1215 1236 0.99

22 25 0.0033 0.27 12.4 5.0 1 23 1242 1264 1242 1264 0.98

23 25 4.3e-05 0.0035 18.3 2.4 1 23 1270 1292 1270 1292 0.98

24 25 1.2e-05 0.00096 20.1 3.6 1 23 1298 1320 1298 1320 0.99

25 25 0.0066 0.53 11.4 2.9 1 23 1326 1350 1326 1350 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.099	8.1	7.7	3.4	1	23	229	252	229	252	0.96
2	25	0.0012	0.097	13.8	1.9	1	23	298	321	298	321	0.96
3	25	0.024	2	9.7	3.2	1	23	327	350	327	350	0.97
4	25	0.00026	0.021	15.9	0.9	2	23	381	402	380	402	0.97
5	25	0.0034	0.28	12.3	2.7	1	23	479	502	479	502	0.96
6	25	0.053	4.3	8.6	0.7	2	23	510	531	509	531	0.97
7	25	0.022	1.8	9.8	0.8	2	23	576	597	575	597	0.97
8	25	0.00099	0.081	14.0	1.6	2	23	610	631	609	631	0.97
9	25	0.0012	0.1	13.7	1.6	1	23	703	726	703	726	0.96
10	25	0.0019	0.16	13.1	0.9	1	22	733	754	733	754	0.95
11	25	1.5	1.2e+02	4.1	1.1	2	23	766	788	766	789	0.94
12	25	0.00054	0.044	14.9	3.6	1	23	797	819	797	819	0.98
13	25	0.0005	0.041	15.0	0.2	2	21	846	865	845	866	0.93
14	25	0.086	7	7.9	7.4	1	23	922	945	922	945	0.98
15	25	0.17	14	7.0	0.9	1	23	982	1005	982	1005	0.94
16	25	0.95	77	4.6	0.0	2	23	1054	1074	1053	1074	0.95
17	25	2.7e-05	0.0022	18.9	0.3	1	23	1080	1102	1080	1102	0.99
18	25	0.0001	0.0082	17.2	6.8	1	23	1108	1130	1108	1130	0.95
19	25	7.6e-05	0.0062	17.5	1.5	1	23	1136	1158	1136	1158	0.98
20	25	6.9e-06	0.00056	20.8	0.4	1	22	1164	1185	1164	1188	0.91
21	25	9.3e-06	0.00076	20.4	1.0	3	23	1216	1236	1215	1236	0.99
22	25	0.0033	0.27	12.4	5.0	1	23	1242	1264	1242	1264	0.98
23	25	4.3e-05	0.0035	18.3	2.4	1	23	1270	1292	1270	1292	0.98
24	25	1.2e-05	0.00096	20.1	3.6	1	23	1298	1320	1298	1320	0.99
25	25	0.0066	0.53	11.4	2.9	1	23	1326	1350	1326	1350	0.92

Sequence Information

Coding Sequence: ATGAGCAATAATAATAAAAATATATGCCTTATAAATGGAGTTCAGTTTAAATGTCGTACCTGCTTTGATCCTGGACCATCATTTTATTCTCTCACAGATGAGTGCAGCAATTCAAAAACTTGGCGTGAGTTACTGAAGGAAGTTACACAGTTGCAGACGAGCGAAGATGAGTTGCTTCCGAAAACAATCTGCAGCAAATGTTTGGACAAACTTATAAGTTACAACGATTTTATACTACAGATTCATAATGTGAACAAAAAATATACACAATTACTGGGGAGTTGTAAAAATGTTGTACAAAATGAGATTATTTCAAATGAAGTTGATAACTTAACGAATTGCCTGGCAGAACAAACTACTGCTGTACCAGTGGAGAATTATGTGACGGATATTAAGATAGAGGACGAAATGCTTGTTCCATACGACATAATTTTAAGTAGCAACAATCAAATTGTTGAATCCAATGAAGAAAATAAAGATTCCAATGATCCTCTAACTGAAGCTTTATCTAAGGGCATAAAATCAATTTCAGAGCATTTGAACAAAATCGAAAGCTCTCGATTTTCCGATGAAACGGAATATATTCCTAAGGATAAATTGGAAGACAATGAAAGCTGTGTTAGCAAAGCGGACGAACGAAAAAAGGTACCATATAATGATGAAATTGAATTGATAAACAATCGTTTTGAATGTACTATATGCAATAAATCGTACAATTTGTTAAATAGTTGTCGCCGGCATGTAAAAATGAGTCACAAGGGAAATGAACTCAGCACCTCATCGTCCGATGAAAGTGATTACGAGCTACCCATAAGCCAACTGTCGCTGAGAGCTAAATCAGCTCAAAGGTCTCACGATTTTGAGCAGGAAATAAAAAAGGTCAATAGTCGCTTCATTTGTCCTATATGCAAACAGTCATTTACATTGCAAAGAAACTGTCGTCGACATATTAACATAATACATTTAAAATCGTCATTATTTTCATGCGGATTTTGTGAACAAACTTTCAGCTGTAGAGACTATTTACAAGCTCACCTTAAACGTATGCATCCAGGCAAATCACTAGGTTCGAACAATAAGCAAGTAGATCGGTTATTTGGAGAACGATTATACAGCAAACCTGCTGCGTGGCGCCTTGTTGAATGTAAGTTGTGTGAAACTGTATTCAAGACAACTAAAGAACTTCGGCAGCACTTGTTAAAGCATAGTGATGTGGACACTCTCGATAGCTTGAATATGAACAGTAACATTGTTCAGCATTTGTTTTCAAATATATTCGATTTACACTTGATTAGGAAAACTATCTGCAAAGATATTCGCGAGAGAAATTGGTCCAAATATTACACAGTGTTAAATGAGTTTTCTCACGAAATGTCAATTAGTGATACAGAAGCTGAAGACTTGGATGATGAAATGGCATATCGTAATAGTAAATACAAATGTGAAATGTGCAAAGAAGAATTTTCGTTTAAATACCAAGTATTCACGCATTTAAAAGAGTTTCATGGGGAGGAGGAAATTCCTTTGAAATGCACTCGATGCAATTTGGATTTTATTTCAATCGAAATGTTCGAACAGCACAGAAAAATCCACTGCGGCAATAACCATAAATATTTACTTTGTGTATATTGTCCTGGAAAGTTTATTTGGCTTGAAAATATGAAAAACCACAGTTGTGCTTCGAAAGTACCGACGACCTCAACAGAAAACAATATAGATAAATTGAAATGTAATTTATGCGATTATGAATTTGAAGAAATGATTAAGTATCAACAACATTTAAAAACACATAATATTGTTGCAACCATTTCTTCAAACGATTCAATACAATGTGGCCTTTGTGATCAAAACTTTGAAAAACTGTGCGATTTGCGCCAACATATGAGACTGCATGCTGATGGTAAAACTGGCATTGACTTTGAAAACTGTATTTATGTTAAACACTTTGAACATTCGAAGACATTGAATCAGGCACTGCTGCAGCAACAGATTAAAGATGCCTATAATAAATTTCAATTAAGTCGTTTTTACCAAGCCATCGATAAATACGGCAACGAAATGGACATTTCCGATTCGGATAGTTGTACCGAAGACTTAAGAAAAGTATACATGTGCGAACTTTGCAAGGAAAGGTTTAGGAAACGAAGACTTTTGCTAAACCATCAGAACGAAAATCATCAATATGTAACCTTGCCCTTTACGTGTCAGGAGTGCCAACAGCAATTTGTTAATTTTGATTTGTTACAGCAACACTTAAAAAAGGTTTGCTGGAATGAACATCGACGAATAGCTGAAAAATGTGAATATTGTAATGATCGCTTCATATGGCCAAATAATCTACTAAAGCACAAAGAAATCCAGCATCACATGTCTGCACATGTTCAACTTTATAATTGTCTTCTTTGTCCAAAAACATTCTTTCGCCTTGAACATCTCAACCAACATTCACGTCGCCATCGTTTGACATCACTTGATGTTAATATCATTGAGAGTATAGTACATTCTACTTGGTGGCCAAACGGTAAAAAGACAATAAAATGCGAAAAATGTGGACAAATGTTTAAAAGTATGGCCGAACTAAAAAATCATTATTTATCGGAAAATCCCCAAAATATGTGTGCAAATCAACAACATTCGCCGGCTAACTATTCGATTACTAATCAAAAAGGATTCGAGTTAAATTTAGAATTGGATTCTGAAACAGAAGTTGAAGACGATGTAGATGCAGCTCACGTTGAGGAGCAAGAAAAGTCTTTGTATCCCTATAAATGCTACATGTGCAGCAAGTTATGTAAACGAAAATATCATATAGCTCAGCATCAACGATCTATGCACAACTATAAACTGATAGACCTTCAATGTGAACGTTGTATATTTAAAACCGTTTCGCAGaaagtcttagattatcataaggccacgcagtgttttaataatgaaaaacgttatacatgtgatcagtgtaattttaaatttatgtggcagaagaatctggataatcatattgctctatttcacaaaccaaaagaatTACTTAAACCAATAGACGCTGGCGTTAACACGGCGATTTCTACAGAAGCTGTTCCGACTGATACATCAGAAAAAAAGGAGAACAATGCTTCAACGTCATCATCAAGCAATCAGCTCTCAGCGAATAAACTGAAATGTCCCATTTGTAGCGCTTCTGTTTTGAATACAAGtcttgcggtacacctaatgaggcacaggggcgaaaaaccatttaagtgtgatttttgcgaaatggcatttccacgcaacgctgatttaaaagaacaccgacgtgtgcacaccggtgaacgtccttacaaatgtacacattgcgaaaaatcgttcagccgtaaaagtaaattaactatacacagtcacctacataccggcgaacgaccgtacaagtgcacagagtgttcgaaagcatttgcaaaatcgcaatttttaaaattgcatatgctaaatcatacgggtgaaaaaccgtatacatgtgatatttgtggcaaaggctatgtacgttcaactgatctaaaaaaacatcgtcaaatttacggtcatatcgagttgttttcaatgccagcagacaacatcactgattcaactgtttccgcaaaaccaaaagagaagagtaaaaatttatgtccaatttgtggggtgtgtttgtctcgcaaatcaagtcttacctatcacatgagggtacacacgggtgagaggccttacaagtgtcatctttgcaatatggcatgcaaggttaaaagtgacttaatatcacacctgcacgtacacagtaatgatcgcccttttaaatgtactcagtgtgacaagaaatttatttcacaatacaaattgtcagttcacaaccgcgtacataccggtgaacgtccgtaccagtgtaagttttgtcagaaaaaatttgcctcccggtataattataaaatacatttgcgtatacataccggtgaaaagccctataagtgtaacatttgcggtgaagcattttcctgtggcgcatatctgaaaaagcatcgtagatctaaaaaacatcaggtagaacaaatTACCCAATAA
Protein Sequence: MSNNNKNICLINGVQFKCRTCFDPGPSFYSLTDECSNSKTWRELLKEVTQLQTSEDELLPKTICSKCLDKLISYNDFILQIHNVNKKYTQLLGSCKNVVQNEIISNEVDNLTNCLAEQTTAVPVENYVTDIKIEDEMLVPYDIILSSNNQIVESNEENKDSNDPLTEALSKGIKSISEHLNKIESSRFSDETEYIPKDKLEDNESCVSKADERKKVPYNDEIELINNRFECTICNKSYNLLNSCRRHVKMSHKGNELSTSSSDESDYELPISQLSLRAKSAQRSHDFEQEIKKVNSRFICPICKQSFTLQRNCRRHINIIHLKSSLFSCGFCEQTFSCRDYLQAHLKRMHPGKSLGSNNKQVDRLFGERLYSKPAAWRLVECKLCETVFKTTKELRQHLLKHSDVDTLDSLNMNSNIVQHLFSNIFDLHLIRKTICKDIRERNWSKYYTVLNEFSHEMSISDTEAEDLDDEMAYRNSKYKCEMCKEEFSFKYQVFTHLKEFHGEEEIPLKCTRCNLDFISIEMFEQHRKIHCGNNHKYLLCVYCPGKFIWLENMKNHSCASKVPTTSTENNIDKLKCNLCDYEFEEMIKYQQHLKTHNIVATISSNDSIQCGLCDQNFEKLCDLRQHMRLHADGKTGIDFENCIYVKHFEHSKTLNQALLQQQIKDAYNKFQLSRFYQAIDKYGNEMDISDSDSCTEDLRKVYMCELCKERFRKRRLLLNHQNENHQYVTLPFTCQECQQQFVNFDLLQQHLKKVCWNEHRRIAEKCEYCNDRFIWPNNLLKHKEIQHHMSAHVQLYNCLLCPKTFFRLEHLNQHSRRHRLTSLDVNIIESIVHSTWWPNGKKTIKCEKCGQMFKSMAELKNHYLSENPQNMCANQQHSPANYSITNQKGFELNLELDSETEVEDDVDAAHVEEQEKSLYPYKCYMCSKLCKRKYHIAQHQRSMHNYKLIDLQCERCIFKTVSQKVLDYHKATQCFNNEKRYTCDQCNFKFMWQKNLDNHIALFHKPKELLKPIDAGVNTAISTEAVPTDTSEKKENNASTSSSSNQLSANKLKCPICSASVLNTSLAVHLMRHRGEKPFKCDFCEMAFPRNADLKEHRRVHTGERPYKCTHCEKSFSRKSKLTIHSHLHTGERPYKCTECSKAFAKSQFLKLHMLNHTGEKPYTCDICGKGYVRSTDLKKHRQIYGHIELFSMPADNITDSTVSAKPKEKSKNLCPICGVCLSRKSSLTYHMRVHTGERPYKCHLCNMACKVKSDLISHLHVHSNDRPFKCTQCDKKFISQYKLSVHNRVHTGERPYQCKFCQKKFASRYNYKIHLRIHTGEKPYKCNICGEAFSCGAYLKKHRRSKKHQVEQITQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -