Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_941918875.1
Location
CALNXE010002015.1:50009-54347[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-14 2.8e-11 44.0 0.2 3 44 651 692 649 694 0.95

Sequence Information

Coding Sequence
ATGTGTACTTTAGCTCCGAAAAAGGACGGAAGTCCAAATATTGAATTTTTTAATTCGAATGAATCATTACAAGGTTTCGAATCAATCCGCCTATGGCTGCAGAAAAATTGTAAAAAATATTTAGCTAATAGTAATGAGCCAATAACAAAAGAATCTTTAGCTCAATTGTTAATACAATTTCTACAATATGTTGAAGCAAAACTTGGAAAAAACTCTGCAGAACCACCAGCGACTCGTATACCGATGCGTTGTTTTTTGGATTTTAAGGCAGGAGGTGGCTTGTGTATTATATTTTCGACAATGTTTCGTTTTCGCGCTGAGCAGAGAGGGAAGAAATTTGATTTTTCAATTGGTAAGAACCCCACCCGTAAGGATCCTAATATACAGTTATTGATTGACATCGAGCAAGCTTTAGTGGAGGCAGACCTTTATCGTATTCCCTATATTTTTATTCGCTCTGAAGTTGACAAGCAATTGGCAACACGCTTACGTGAAATTTTAGCTACTCGACGAGTAGAAATTGTAGTAGATGAAGAAGATGCCACTCATATAATATATCCTGAGGTTGATCCTCATCCTGATGAGTATGCTCGCCCCATTTTCAAACGTGGGAATTGTGTTATGATGCATTGGTATTATTTTCCCGAATCATATGACACGTGGACACCAAACTCTTTGGAATTTGCTGACAATGTTCCCGAAAATCCGGAATCTCCAGTTGAACGCTGGCGTGTTTCCGCCTCGTGGATATTAGACTTGGAGCAATATAACGAGTGGATGGCGGAAGAAGATTACGAGGTAGATGAAATGGGAAAGAAGAAAATGCATAAACAACGATTGTCGATTGATGACATAATGTCTGGTGGTATAGACGATAAGAAGAAAGTTGTCAGTGGCACTCCAGTTGTTGCCAAACAAAAGCGTAGGCGTTCTCCTTCGCCCAGTTCCTCTAAACCTGGAAAACGTAAGCGCTCTCCGGCAGTACTTCACAAAAAGTCTCGTAACGATGAAGAGGATGAAGATTTAACACGTGACATGGAAGACCCCCCGGCAGAAACAAATCTTCAGGAGGTTATTAAAACCAGTTCGCAACAGTCTACAGCTAGTCCAGCTCCTGGTAGCAAATCTAGAGCCGATAGTGATATGATGCCAATCAAAGGTGGCACTATAACTGATTTAGATGATGAGATGACTGGTGGCAGCTGTACTCAAGCGTTGTCTGCATGTGATGGTGAAAATTCTCAAACTGGCAAAACCAGTGAGAACAGTAATACTCAAGAATTCTCATCATCAGCAAAGGAAGATATGGAGGATAATGTTACTGAGCAGACACACCACATTATCGTTCCCTCATATTCCGCATGGTTCGACTACAATTCTATACACGTAATTGAAAAACGTGCAATGCCAGAATTCTTCAACTCGAAAAATAAATCTAAAACCCCTGAGATTTATATGGCATACAGAAATTTCATGATTGATACATACCGTCTCAATCCTACTGAATATTTAACTAGCACAGCCTGCAGACGTAACTTAGCTGGTGATGTTTGCGCTATTATGCGTGTGCATGCTTTCCTTGAACAATGGGGCTTAATTAATTATCAAATTGATGCAGAGTTAAGACCTACACCGATGGGGCCACCACCTACATCTCATTTTCATATTTTATCAGATACTCCTTCAGGCATACAGTCTTTAAATCCTCAAAAAACTCAGCAACCATCAGCTGCCAAATCTCTACTTGACCTGGATAAGAAGCCTAGTAAGGAAGGTCCTAGCAAGGAAGGTAAAGAAGATTCTTTGGATAAAGCACCAGTTGGTATTAAAACTGAGCCAGTAGAGAATGGCAGTGCTGCCAGTGTTTCAGGACAATTTGGTTTAAAACTTGATCAATACGCTAAAAAACCAGCTGCAATGAAAAATCGTACTGCAGCTAGTTTGTCCAGGGATTGGACTGATCAGGAAACTTTACTTTTACTTGAAGGCTTAGAACTGCATAAGGACGATTGGAATAAAGTTTGCGAACATGTGGGCACTCGAACCCAAGATGAGTGTATTTTACACTTTTTACGACTACCAATTGAAGATCCCTATTTAGAAGATGATGGTGGATTTTTGGGTCCTTCAGGTTGCCAGCCTATTCCTTTCAGCAAGTCGGGCAATCCCATAATGTCTACGGTTGCATTTTTAGCTTCCGTAGTAGATCCACGTGTGGCTGCAGCAGCAGCCAAAGCAGCAATGGAAGAATTTGCGGCTATAAAAGATGAAGTGCCAGCAACAATTATGGATAACCATATGAAAAATGTTGAAAAAGCCTCAGCATCTGGAAAATTTAACCCTTCGTTTGGTTTGGCAAGTAGTGGCATTGCAGGTACAGGTGCAGACAAAGAAGAGGAAGAAACTAATTCGACAACAGTAGGTGCAGTTACATCGGGAACTGCAGATGAAGAGATGAAAGATCTTTCCAAAAAGGATGATAAAGATCTTACCAAATCCCATTCCAAACACAAAGACGAATCTAAAGACAATGATAAAAAAGATGACAAAATTGAAAACGATACCGGTAGTAAAAAAGATGAAAATGGTAGTGGAATTGATGTCAAGGAAATTAAAACAGAGGAATCTAGCAGTGAAGGTGGTTCAAAAGAAGTAGATACATCGAAGCAAGTATTTAATGAAACAAATGTGCAAACAGCAGCTGCTGCTGCTTTGTCCTCTGCAGCAGTTAAAGCAAAACACTTGGCAGCATTAGAAGAACGAAAAATTAAATCATTAGTTGCTCTCCTGGTGGAGACTCAAATGAAAAAGCTAGAAATTAAATTGCGCCACTTTGAGGAACTAGAAACGACAATGGAACGTGAGCGAGAAGGATTAGAATATCAAAGGCAACAACTTATTACCGAACGCCAACAGTTTCATCTAGAGCAACTAAAAGCTGCCGAGTTCAGAGCTAGGCAACAGGCTCATCATCGTCTTCAACAGGAACAGCAATGGCAAGGTGGTGCATCAGCAGCACCACCAGTCGTCAACGCGACAGCATCGGCAACAAGTGGCTCTGTCTCAGGTTCTACAGTGTCACCAAGTACTACCTTACCTGGTGCAACGACGGGAAGTTCACAAATAGGTCCAAATGGAACTATGCCAGGAGCACCTGTTGCCGCTCCAACACATGTTGGAGCATCTGGACTTAATCCGACAAGTGCTGCTGCTGGCCAAACACCATCTCCAATGGACACAACTCCACCCGCTGGTGGTCCAACTGTTCCAACAACTGCTTCAGAATCATTTTCTACTACGTCTGCTACAGGGCCATCCATACCGTCAACAAATCCCACTATTCCGATATCTACAAATGTAGCCGGGTCCTCTATATCCACACCTAACATTCCTCCTGCCCCAGGAGTTGCAGCTGGCACTACCGGAACATCTTAA
Protein Sequence
MCTLAPKKDGSPNIEFFNSNESLQGFESIRLWLQKNCKKYLANSNEPITKESLAQLLIQFLQYVEAKLGKNSAEPPATRIPMRCFLDFKAGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIDIEQALVEADLYRIPYIFIRSEVDKQLATRLREILATRRVEIVVDEEDATHIIYPEVDPHPDEYARPIFKRGNCVMMHWYYFPESYDTWTPNSLEFADNVPENPESPVERWRVSASWILDLEQYNEWMAEEDYEVDEMGKKKMHKQRLSIDDIMSGGIDDKKKVVSGTPVVAKQKRRRSPSPSSSKPGKRKRSPAVLHKKSRNDEEDEDLTRDMEDPPAETNLQEVIKTSSQQSTASPAPGSKSRADSDMMPIKGGTITDLDDEMTGGSCTQALSACDGENSQTGKTSENSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGIQSLNPQKTQQPSAAKSLLDLDKKPSKEGPSKEGKEDSLDKAPVGIKTEPVENGSAASVSGQFGLKLDQYAKKPAAMKNRTAASLSRDWTDQETLLLLEGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPSGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASASGKFNPSFGLASSGIAGTGADKEEEETNSTTVGAVTSGTADEEMKDLSKKDDKDLTKSHSKHKDESKDNDKKDDKIENDTGSKKDENGSGIDVKEIKTEESSSEGGSKEVDTSKQVFNETNVQTAAAAALSSAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGASAAPPVVNATASATSGSVSGSTVSPSTTLPGATTGSSQIGPNGTMPGAPVAAPTHVGASGLNPTSAAAGQTPSPMDTTPPAGGPTVPTTASESFSTTSATGPSIPSTNPTIPISTNVAGSSISTPNIPPAPGVAAGTTGTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01314595;
90% Identity
-
80% Identity
-