Pruf012562.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Physocephala rufipes
Gene Symbol
nfxl1
Assembly
GCA_963966595.1
Location
OZ016503.1:20774819-20782361[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 3 2.4e+04 -5.2 2.6 15 19 125 129 125 129 0.87
2 18 0.19 1.5e+03 -0.3 0.4 4 10 159 165 158 165 0.95
3 18 4.3e-08 0.00034 20.9 17.0 1 19 173 190 173 190 0.99
4 18 3 2.4e+04 -4.4 2.1 5 10 215 220 215 220 0.91
5 18 0.00046 3.7 8.1 13.9 1 19 226 245 226 245 0.97
6 18 2.3 1.9e+04 -3.8 1.2 6 10 270 274 269 274 0.88
7 18 0.00011 0.84 10.1 10.0 1 19 280 298 280 298 0.93
8 18 1.8 1.5e+04 -3.4 0.4 1 8 323 329 323 330 0.59
9 18 2.1e-07 0.0017 18.7 10.8 1 18 333 350 333 351 0.97
10 18 9.2e-06 0.073 13.5 14.9 1 18 385 402 385 403 0.97
11 18 3.4e-08 0.00027 21.3 12.8 3 19 414 430 412 430 0.91
12 18 0.2 1.6e+03 -0.3 13.2 4 19 470 485 468 485 0.82
13 18 0.013 1e+02 3.4 6.5 1 12 497 507 497 507 0.95
14 18 7.8e-06 0.062 13.7 3.9 1 11 570 580 570 581 0.96
15 18 3 2.4e+04 -4.7 1.5 15 19 600 604 600 604 0.84
16 18 0.15 1.2e+03 0.1 16.6 3 18 614 629 613 630 0.93
17 18 3 2.4e+04 -5.5 2.1 9 13 636 640 635 640 0.72
18 18 4.9e-06 0.039 14.4 13.0 1 18 681 700 681 701 0.86

Sequence Information

Coding Sequence
ATGGAAAAGTATGAATCTAGTTCTGAGGAAGAAGACCTcaatgaacaaaatattttaaCCAACGTTTATTCTTACTATAAGACTGCGCTAAAAGTTGACCAACCACCGGCTAAAGTGTCCACCTTTCTTGAGAATATAATTCATTCCGGGTCCGCCGTATGTCTCATATGCAtcgcaaatataaaatatgccgATTCTATATGGTCATGCAagcattgttattgttttttccatTTGTCTTGTATTAAACGATGGGCAAACGACAGCGTGTCACATATTAAATCTGAGCACAATAGAAATCCAAGTCATGGATATTATAACAATTTGGGTGTCTATATTTCTCCAGCAAAACCAAAAGAGCCCAGATGGTATTGTCCGCAATGTAGGCAGGATTATAAACCTGATAGCCCCTTGCAATACGAGTGTTTCTGTGGAAAGGAAATCAATCCCACCCATCAAGCTTGGCTATTGCCACACTCGTGTGGAGAAATATGTGGAAAACTTTTAATGCCGGAATGTGGACATAAATGTTTGTTATTATGCCATCCAGGTCCATGTCCACCTTGCCCTCAGAATGTAAAGATATCATGTGCTTGCGGTTTGTCCACTCCAAGACTGATGCGCTGTTCCCACAAACAGTGGACATGTGAGAGGCAGTGCAACAGTTTATTGGCATGTGGAAAGCACATTTGTGGAAGTAAATGCCATGCAAAGGATCAGTGTCCTCCATGTAAACGTTTCGGTCTGTATTCCTGCATatgcaaaaaagagaaagccACGCGCGTATGTTTCGAAAGAGTTTGGCAAtgcaaaaatGTTTGCAATCGTAAATATCCGTGTGAGATACATGACTGCAAAAGAGTGTGCCATGCCGATTCTTGCGGAGAATGCCCTCTAGGACAACAGCGTAGCTGTCCTTGTGGGAAAAAAAAAGAAATCGGTCCTTGTAATGAAGTCATCGATTCCTGTGGAGACACTTGTCAAAAATTACTTGCATGCGGCCTTCATTATTGCGGGCAGAGATGTCACAAGGGTGACTGCAGTAATTGTCTGATTATTACCGAAAAGAGGTGTCGATGCGGAAAATACAAGAAGGAACTACCCTGTCAGAAGACCTTTCTTTGCGAAACAAAATGCAAACAACTTCGATCTTGCGGAAAGCACGCTTGCAATCGaaagtgCTGCGATGGACAATGTTCGCAATGcgataaaatttgttcaaaggtTCTTAACTGTAAGAAGCATAAATGCAAATCAGTTTGTCACGATGGACCTTGTTATCCCTGTAAACAAACCTCACAAATAAACTGTTTCTGCGGGgctgtttcaaaaaatgttcctTGCGGCAGAGAGCGCAAAACCCGAATAAGATGTGTGCAGCCCTGCAGaATCACACCAAAATGTCATCATAAAAACGATCATCTTTGCCATAAGAATCAATGTCCACCTTGTACTCAAAAGTGCGGTCTTATTAACAAGTCTGCGGGTTGTGGCCATATTTGTGAAGCACGATGTCATACAGCATTAGAAAAACTTAACAACGGTCCGAAGAACACGAATATTTCAATTGAGCTGGACTCACTTGTGCATCCTAAATGCCAAGTTAAAATAATGGTGCTTTGTATTGGAGGGCATAAAAAAGAGAAGCTACCATGCTGGAATTCATCACCCAGATCTTGTACTGGTCAATGTAACCGATTGCTAAAGTGTGGAAATCACTATTGCCCTGCGACATGCCATGCAGTTGAAGATGTCCTCAGCACTTTGGTTCAAATTACTATACAaGAACAAGAAGGATGTCTTCCTTGTACCGAATCGTGTAAACTGGAGCGTGGCTGTGAGCACCCATGTCCTCTTTCTTGTCATTTACCCCCATGCCCGCCATGTAATGTCATAATTAAGACTAAATGCCATTGTGGTCTCTCTCAGGTCATCTTCAAATGCGCTGATTACAATAGTTTTGATGGGTCTAAAGAATCATTTGCTACTGTATACGAACGTCTGCGAAGTTGTGGTGGTCGGTGCATACTGaagTTTCCTTGTGGGCATCGTTGTCCAAAAACTTGTCATTCGGGTGAATGTGCTGACCCAAATACTTGTCAAAAGAAAGTGCGTATATTTTGCGAATGTAAACGCATAAGAATTGAAATATCGTGCGGCAAATATCGTTCCGGAAGGAAGTCAATATTGTGTGATGAGAGGTGTAAACAGGCGGCTTTGGAGAAAATAAGAATCCAAAAAGAACGCGCCGAAAATAATTCGGAGAGGGAAAATAgcgtaaataaattaattgatcgTCGACGGGGACACCACATCGAAAAGGATGGGATGCATAAAAACTACATTAAAACTATCGAAAGCAAAGTAAAATGGAGACAGATGTCTATATACGGTGCTATTTTGATAACTGTATTAGTGGCCATCTATGTGGCTCTTCATGATGGTTTATAA
Protein Sequence
MEKYESSSEEEDLNEQNILTNVYSYYKTALKVDQPPAKVSTFLENIIHSGSAVCLICIANIKYADSIWSCKHCYCFFHLSCIKRWANDSVSHIKSEHNRNPSHGYYNNLGVYISPAKPKEPRWYCPQCRQDYKPDSPLQYECFCGKEINPTHQAWLLPHSCGEICGKLLMPECGHKCLLLCHPGPCPPCPQNVKISCACGLSTPRLMRCSHKQWTCERQCNSLLACGKHICGSKCHAKDQCPPCKRFGLYSCICKKEKATRVCFERVWQCKNVCNRKYPCEIHDCKRVCHADSCGECPLGQQRSCPCGKKKEIGPCNEVIDSCGDTCQKLLACGLHYCGQRCHKGDCSNCLIITEKRCRCGKYKKELPCQKTFLCETKCKQLRSCGKHACNRKCCDGQCSQCDKICSKVLNCKKHKCKSVCHDGPCYPCKQTSQINCFCGAVSKNVPCGRERKTRIRCVQPCRITPKCHHKNDHLCHKNQCPPCTQKCGLINKSAGCGHICEARCHTALEKLNNGPKNTNISIELDSLVHPKCQVKIMVLCIGGHKKEKLPCWNSSPRSCTGQCNRLLKCGNHYCPATCHAVEDVLSTLVQITIQEQEGCLPCTESCKLERGCEHPCPLSCHLPPCPPCNVIIKTKCHCGLSQVIFKCADYNSFDGSKESFATVYERLRSCGGRCILKFPCGHRCPKTCHSGECADPNTCQKKVRIFCECKRIRIEISCGKYRSGRKSILCDERCKQAALEKIRIQKERAENNSERENSVNKLIDRRRGHHIEKDGMHKNYIKTIESKVKWRQMSIYGAILITVLVAIYVALHDGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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