Pruf003373.2
Basic Information
- Insect
- Physocephala rufipes
- Gene Symbol
- pnr
- Assembly
- GCA_963966595.1
- Location
- OZ016501.1:19015039-19016963[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-18 1.8e-14 53.4 3.2 1 34 118 150 118 152 0.97 2 2 6.9e-19 2.8e-15 56.0 6.2 1 35 175 208 175 209 0.98
Sequence Information
- Coding Sequence
- ATGTATCACACCAGCGGCGGCTATGCCGATTTGGCCGGTGCCGCAGGTGCTTCCGGAGTCACTTCATATCATCAGCAGGCCGCAGTGAATACTCCCGTGTACGTACCTTCGAATCGCGCCCTCACCAGCAGTCAATACAATCACGTGGCAGCACATTTCGGTACTGCTGCCGCACAAAACGCATGGACAACCGACAGCTTTGGCACGGCTCACGCTCAGTTGCCAGCGCAATTTTATACGCAGAACGCGATGATGATGGGATCATGGCGTGCCGCCTATGACCCGACCGGCTTTCAGCGTAACTCTCCCTACGAAAGCGCCATGGACTTTCAGTTTGGGGAGGGGCGAGAGTGTGTGAATTGTGGAGCGATTAGCACGCCGTTGTGGCGGCGTGACGGAACTGGGCATTATTTGTGCAATGCTTGCGGTCTCTACCATAAAATGAATGGCATGAATCGACCGTTGATCAAGCCGAGCAAGCGACTGGTGAGTGCAACGGCAACAAGGCGGTTAGGTCTTTGCTGTACCAATTGCGGCACACGCACCACGACGCTGTGGCGACGTAACAACGAAGGCGAGCCGGTGTGTAATGCGTGCGGTTTATACTTCAAGCTGCACGGCGTGAATCGACCGTTGGCAATGCGTAAAGATGGCATTCAGACGCGGAAACGAAAACCCAAGAAATCAAATGGAAGCGGTACGGAAGGCAGTAAAGATATCAAGGAAGACGATTTAAAGCCTTCTTTGGGCTTGGACCATCGGCACGGTCTTCAGACCAGTTTGGGCACGTCGGCTATTGCTGCAAAATTGCAAACGGATTTTGGCATCAAGAGTGGTCACAGCAGTGGCAGCGCCAGTAATCCTCTTCACAATCTAAGCCTTGGCGGCGCCGCTCTCAGCCATCATTTGCATCTGCCCGCGAGTGCCGCGCAACATAACCGTCATTCCACTTCCAGTCATTCCAATGCATCAGCAGCAGTTACGCCCAATTCCACAAGCACCTCTTCGTCCCTCAACGCCCATCTTTATTCGCCCCCTAGCTCGCATCATCATCTTCCTGCATCCTCAGCTCATCAGTCGCAATCTagccaacaacagcaacaacaacagcagcaacaacagcaacagcttcaacaacaacaccaacaacaacaacttcaacTAACACAAAGTTTCGGCAGTCACACCCCATCGAAATACGAGCACGTGTTAGCCGTGACGCCACCAAGCAGCGGCGGCGGTGGTGGCGGCAGTGGCAGTGTTGGTGGAAGTAGCAGCAATAATTCGGCGGCATTACTCTCGAATGGCATTTCTGCCAGTACGCCCAGTCcgaattatcatcatcaccatcatcaccattcGGCAGCAGCTGCCGCTATGCAtttacatcatcatcatcatcatatggCACATCATGCAcatgcagctgctgctgcggcGGCTGTAGCTCATCACTCAACGGCCTTGAGTCAGCATTCCAGTGTCGGAGGCAGCTCTGGCGGCTATGGCGTAAAGTCCGAGGTTAATACGACGAATTACGACTATGTGAATAACTGTTACTTTGGGGCCTCCTTCGGAGCATTGGGGGCCACAGGGGCAGGCGGTGGGATACACGGAACTGCAAGCGAATTGGCCGGGTATCACCATCAGCATAATGTCATCCAAGCGGCCAAACTAATGGCAACTTCTTAA
- Protein Sequence
- MYHTSGGYADLAGAAGASGVTSYHQQAAVNTPVYVPSNRALTSSQYNHVAAHFGTAAAQNAWTTDSFGTAHAQLPAQFYTQNAMMMGSWRAAYDPTGFQRNSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSNGSGTEGSKDIKEDDLKPSLGLDHRHGLQTSLGTSAIAAKLQTDFGIKSGHSSGSASNPLHNLSLGGAALSHHLHLPASAAQHNRHSTSSHSNASAAVTPNSTSTSSSLNAHLYSPPSSHHHLPASSAHQSQSSQQQQQQQQQQQQQLQQQHQQQQLQLTQSFGSHTPSKYEHVLAVTPPSSGGGGGGSGSVGGSSSNNSAALLSNGISASTPSPNYHHHHHHHSAAAAAMHLHHHHHHMAHHAHAAAAAAAVAHHSTALSQHSSVGGSSGGYGVKSEVNTTNYDYVNNCYFGASFGALGATGAGGGIHGTASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00366889;
- 90% Identity
- -
- 80% Identity
- -