Basic Information

Insect: Physocephala rufipes
Gene Symbol: RREB1
Assembly: GCA_963966595.1
Location: OZ016504.1:35009193-35015793[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0084 0.82 10.6 0.7 1 21 301 321 301 323 0.95

2 15 0.00035 0.034 15.0 0.2 1 23 333 355 333 355 0.98

3 15 2.4e-05 0.0024 18.6 7.5 1 23 361 383 361 383 0.98

4 15 1 1e+02 4.1 0.1 1 23 626 650 626 650 0.91

5 15 0.07 6.9 7.7 2.0 2 19 656 673 656 673 0.97

6 15 3.9 3.8e+02 2.3 4.8 1 23 715 738 715 738 0.91

7 15 0.52 51 5.0 0.1 1 23 905 927 905 927 0.97

8 15 2e-05 0.002 18.9 1.2 1 23 937 959 937 959 0.99

9 15 0.00086 0.085 13.8 2.0 1 23 965 988 965 988 0.97

10 15 0.0031 0.3 12.0 2.0 1 23 1335 1358 1335 1358 0.95

11 15 8.9e-05 0.0088 16.9 0.3 2 23 1701 1722 1700 1722 0.97

12 15 0.15 15 6.7 6.3 1 23 1728 1751 1728 1751 0.97

13 15 2 1.9e+02 3.2 5.4 1 23 1890 1913 1890 1913 0.93

14 15 0.0087 0.86 10.6 0.5 3 23 1970 1990 1968 1990 0.96

15 15 0.0014 0.14 13.0 4.8 1 23 1996 2018 1996 2018 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0084	0.82	10.6	0.7	1	21	301	321	301	323	0.95
2	15	0.00035	0.034	15.0	0.2	1	23	333	355	333	355	0.98
3	15	2.4e-05	0.0024	18.6	7.5	1	23	361	383	361	383	0.98
4	15	1	1e+02	4.1	0.1	1	23	626	650	626	650	0.91
5	15	0.07	6.9	7.7	2.0	2	19	656	673	656	673	0.97
6	15	3.9	3.8e+02	2.3	4.8	1	23	715	738	715	738	0.91
7	15	0.52	51	5.0	0.1	1	23	905	927	905	927	0.97
8	15	2e-05	0.002	18.9	1.2	1	23	937	959	937	959	0.99
9	15	0.00086	0.085	13.8	2.0	1	23	965	988	965	988	0.97
10	15	0.0031	0.3	12.0	2.0	1	23	1335	1358	1335	1358	0.95
11	15	8.9e-05	0.0088	16.9	0.3	2	23	1701	1722	1700	1722	0.97
12	15	0.15	15	6.7	6.3	1	23	1728	1751	1728	1751	0.97
13	15	2	1.9e+02	3.2	5.4	1	23	1890	1913	1890	1913	0.93
14	15	0.0087	0.86	10.6	0.5	3	23	1970	1990	1968	1990	0.96
15	15	0.0014	0.14	13.0	4.8	1	23	1996	2018	1996	2018	0.99

Sequence Information

Coding Sequence: ATGATTAAAACTACTGCCACCGCAACcccgcagcagcaacaacaacaacaacaacaactcacaGATAGCAACAAGCACGACGTTCAGCCTTCTCCAGCGAAAATGGAGCGTCGTAATTCCAATACGTCCGAGTCTTCTCTTGAACATCTTGATCTAGGCCGGACACCTCAGAAACTTAACATTCCCACCTCTGCTACGTCAACCCCGCGCATATACAGTAcgagcataagcagcagcggCGATAGGGGTGGCAGCGCCAACGGTAATCAAAACACCTCAGTACTGACCAAGCTCACTACTGGCACTGGCGCCGCTACCGTTGCGAATGCCGATCGTGCGATCGGTGAGAAAACTTTTaacgaaatttgtaaaaagccGAAAACGAATCGTCACACACAAAATCAAGACTCCGACGAGGCGAACGattgcgatgatgatgacgatgatgacgaagaCTCAAGCGAAGAGAAACACAGAGGAGGAAACATTTCGGCATCACGTtcacatcgtcatcatcatcatcatcataagagACGCAGTAGTGGACGTAGTTTGGATAAGCGAAGCGttcaattagaattaaattcagACAATCCGAATTCGCTTCGTAAGAAGTTCCGATTTAATCGCAGTGTCACCAACGACAGCGTCCAACCAACGGAGCGAACCAATAATAATGAATCGGGTTTCATTGATGCGAGTTCGAGCAGTAGTCAATTCCTGAACGCCTCCGCCACGTCTTTAACCGCCATGCATACCAAGAAACAATCGCATCATCAGTCACCCGAGAATTGCGCCACCGGTTGCCAGAGCTCATCGTCTGCATCATCGTCTCCACACGGCGCAGGCGCGTCAGGGTCAAGTCCAGAGTCCGGTCTCGGTGAACGCGATGATATGAAATTCGTGTGCCCGATTTGTGAAGTAGTTTCGGCGACACCCCATGAATTCACCAATCACATACGATGCCACAATTATTCATCAGGTGATACAGAAAATTTCACTTGCCGAATTTGTTCGAAGGTTCTCTCATCGGCTTCCTCTCTTGATCGTCATGTACTCGTTCATACGGGTGAGCGGCCgtttaattgtaaatattgccACCTTACATTTACCACGAATGGCAATATGCATCGTCACATGCGTACCCACAAACAGCATCagcataatcatcatcatcgtcgaaACTCGAATGGAACAGCGTCTAAACATGCTACCAAttcaaataacaacaacaacaacaacaacaacaacaacaacagccacaaTAGGAACACCGTAGTTGGCGGTGCAGCACAAAGCGATGTTGCTTCTACTGCCGCCGCTCCCGCCGCTCATCTAACGAATGGCACGGCCAACAATGAACGAAGTACTAAAGCGACGGTCGAAATGCCGCCAACTTCAGAAACAACGCCCAACCCCGCGGCCGCACAGACAACGATCAATGGCTATGACGCCAAAAGACGAACGCGATTAAACGGCggcattaaagaaatttacgaTAGCGATGGCGGTTGCTCAACAGATTCCTCAAGTGGCATCAGTCATGACTCGATTAAAGCTGAtcacaatgacaacaacaaaattaacaacaacaacaacaacaataaaaacagcaacaacaatgacagccTAATTAACATGAAAGCGAATGGTTACAGCAAAGACTACAATAATAGTTGTAAGCGTAAAAATATCGATATCATAGACATGGATTTAAGTTATCTGAAACGTCGAgcgaaaatcaataatttattaaattccggCGAAGAGAATCCAACTGATAATCATCCATCCATGATTCCCACGTCCTCTGAATCGAATGAAGTTGATCGGCAAACACCGACTGAAGCGCTACGGCAGCAAACTCACCATCTCTTTACTTGTCCGGTTTGCAACGCCGCGGACTTCGACTCATTGTTGGATTTAAGCAAACACATGGATAACGAACACTGTGACATTCCCGCTAAGTGTCGTCATTGCGATGTAATATTCCGCACGCATCGCCAATTGAACGTGCATCCTTGCACTATGGCCAACACCCAGCCTCGAATGAAAATCTTTGCCAGAGATCGCGAATTCGTCGACGAATtctcaaatgaaaattcacCACACATTCCGGCAGCGACAGTTCAAACACCGAAATTCACTTGCTCTAAATGCGGTTGTGGTTTTGTTTCCGACAACGATCGCGATGCGCATATGCATGAATGCCATACATCGCAGATCGTACAACGACCTCTTGCTAACACCGAACACGACATTGAAACAGAAGTGCCAGAACGATCATTAGAGAATCAACCGTTAAGTGAATTCGCGCCTAGTACCGAAGATGCTAAAGCCGAGGAGAAGAATGACGAGGAGCATCGTTGTGAGGAATTCTTCAAACGTTTGTATCTGAAAAGCAAGACAGCGAACGCTCAGCAGAGGCAATCATCGGAATCGTCGCATCATTCGGTAGACGATGATCCCCTTGATGATCTTAAATTCGAAGCTGATTGTGAACGAGTCGCCCAGCAATCGCACGATTCCAAAGATCTGGCCGATATACAATCAATTCTTAACATGACATCCTCTTCATCTACATCGAATTTTCTTAAGAACTTTGAAAATTCCGTCAATACACCGTCCAGCAATTACGGCCTGGataaagatgaagaagaagctCAGGATGTGTTTACTTCAGAGTTTCGAAAAATGAAACTGCGCGGCGAATTCCCTTGCAAACTGTGCATCGCTGTATTCCCGAATTTGAGAGCACTGAAAGGTCATAATCGTGTTCACTTGAGTGCGTCCGGACCGTCAGGACCATTTCGTTGTAATATGTGCCCGTACTCAATTTGCGATAAGGCGGCTTTGGTGCGTCACATGCGCACACATAATGGCGATCGTCCTTACGAATGTGCCGTATGCAATTATGCGTTTACAACCAAAGCAAACTGTGAGCGTCACTTGCGTAACCGTCACGCTAAAACGACTCGTGATGATGTTAAACGTGCCATTATCTATCATCCTTCAGAGGATTCCACCTGTGATGACCCGACTAAGAAATTGCATTTGTTCTCGTCGCCGGAAGTCGATGAGGACGTCGAACTGCAATACCAACACCATCAGCCAAATGATCGCTCCACGCCAGTATCGCACTTAAAGGATATGCTTACCGGCGACGATGGTCGTTCGCATAAAGCGGTAAAAATCCAAGTAAAAAGTCTCGAACAACTTCTGGATAAAGCAAACGTTACTTCCGCTTTCAACGAATCTTTCGAAGAGCACGAACAGCAACCACCAGACTCAGATCAGTCACCCATCGATCTAAGCATGGATGTTCTAGATTTGAGTAAGAAACCTGCTAAATCCTCGTTGGAAACACCGCCAAATGCATTAGAAACACCTCAATCGAATGCAATTCTCGCTGCAGCGACAAACGACAACGACAATGATCCCAAATCGGAAATGCACATTCCCGACAAGAATCAGCAATATTTATTGGCTCAGCAACATCTAATTAACGATGCTTTCCCCAAAATTGTCGATCCCGCTCATTACTTCCAGCAACTATACCGCAATCTGGTGTTCCCACCCATAAATCCTATCAACCCATTCTTCCTTCACAACTCATTTCTCCCGAACAATCTGGGTGACCTTCAAAAATATGCTCCTTTGATGAATCGTATGTTCACCGAATCACATGCAATGATTACCGATCCAAAAACCATTACTTCTGACCCAAACCTGATGATGCCATCAAGTATACCGCCTCAACCAAGTCCACTACTCTCGGACAAATCGAGCGTTTCGTCAGTGGCTTCATCCTCTCCCGTGAATACAACAAATGCCATGCATAATAAACCCATTGCACCGTCAACACCTCCTCAGGCCATAAATATCCATCGACACCAAAACATCCAGTCGACAACTCTATCGGGTGGTCCGGTCAAGATGGTAATAAAGAACGGTGTACTAATGCCCAAACAGAAGCAAAGACGTTATCGCACCGAGAGACCCTTTGCGTGCGAGCACTGTTCCGCCAGATTTACCCTACGCTCAAATATGGAACGTCACGTTAAGCAACAACATCCTCAATTCTATGCTCAGCGTCAGCGTAGTGGTCATCATATTTTGCGCGGGCGCGGGGGCAGCAACACGACCGCAATCAATAGCATCACGCATTTACAGGCGGCCATTTCCGCccacagcggcagcagcagcggtCACGTGGCCTCCGCGTCTATTTCCGATCAGGTGAAATATGCCATTTTGGCTCAGCAGCTGAAAGCACGAAAGGATACCGATCTACTACATCAGGCTCTGGCACACGGCTCGAGCAGCATAACGTCCGCTCATTCGCCTTTGGCATCAGCAGCCAATTTGTCCCGCCCCGCCAATTCAGACgtccaattaaattttaacagttTAAATAATAACGGTATCAATAATGGCGCACCGGAAGAAGAGGATGATCCAAAACTGGTAATCGAcgaagacgatgatgatgacgatgacgaagATATCGAAGAGATTGTAGATGATAACGAAGAGGATCTTGAGGTAGCCTTTGAGTGCCGTGGGGAAgctattaatttgaaaagccGTTCGAATAATCGCCATCAGTCGGAAATAAATGACGACCTATTGCAACAAATCGTTAATAAAAAGAAGCCGAATGAATCTGCAAAAAAAGTTGCAGAAACCATCCTCGAACAAGCGATTAAAGCCGGCAGTACCGGATTGAATTCTCAATCTAATTCTGGAAAACCGAACGTGGCGAACTCCAAAAAATCCGTCACTACCATGAAGACAATGATCGCTCAGGCAGAATCAGTTGGTAAATTCCTTAAAGAGGTGGCAAGTTCTTCGTTTAAAGACGAATCGCAAGATTTAGTTCCCGTAGCGAAATTAGTCGACAATGCCACCACCAATTCGATGTCCTTCAACAACTATTTTCGGCCGAGTGACGTCGTTAATCAAATGGAGCAAAGTGATGAGGAAGGATTGGTCGCCTCTGGCAGTGCTTCCGAGAGCAACAATTCGGGCACCGAAGATATTTCGTCAGCAGCCGaaccaaaaaagaaatccGCTTATAGTTTGGCTCCGAATCGTGTTTCTTGCCCGTATTGCCAGCGTATGTTCCCGTGGTCAAGTTCATTGCGACGACATATTCTCACACATACCGGCCAGAAACCGTTCAAGTGCTCGCATTGTCCCTTACTCTTCACCACTAAAAGTAATTGTGATCGGCATTTGTTGCGCAAACATGGCAATGTCGAATCGGCAGTTTCGGTATACGTGCCGACCGAGGATGTCAACGAGCCTATACCAGTTCCGAAATCGGTTGAGGAAatcgaacaacaacaacgtcaacgCCAGGAAGAGGAACGAAAACGTAAGGCAGAAGAGCACGCTCGCTTGGAAAGAGAACAACGCAATCAACGCAATCAACGCGAACAACTAGAACAACttcaacaagaacaacaacaacaccagcaacagcaacaactattGAAACAACTTGCATCCGCCCAGTTCAAACAATCATCTCAATCTCAAATCACATCCGCATCGATGAAATTGGAATCAAATAGTGCCCCATTTGCCGCTGCTTCTGCCGGTGCGGGTGGTGCTGCTTCAGTTGGATCTGCCTCAGCGAATGCAGTCTATTCCGAACTGCCTTTCAAATGTCATCTCTGTGATTGCTCTTTCGCTGAACGGATCCAATGTTTAGATCACATCAAGATCCAGCACACTCAAGAATTCTCTTTACTCTTGACCAAGGGTGCCCTTGAAACGGATCCCGAACATAATCAGGGGAACTCTGCCGAGGATGAGGAATACCGGCGGCCGCCACCGGGCAGCGAAGAGAATACCGCTCGCAATGGCAAATATCCGGACTATAGTAATCGTAAAGTGATATGCGCATTTTGCGTGCGACGATTCTGGTCGACCGAAGATCTTCGTCGGCATATGCGCACCCATTCCGGTGAGCGACCATTCCAGTGCGATATTTGCTTGCGTAAATTCACTCTCAAACACAGTATGCTGCGTCATATGAAGAAGCATAGTGGTCGGCATGATAGCAGTATTGCATCGTGTGAACTTTCGAATGCCGGCAACAGTTGCTCCGATCTATCCGATGATGAACAAATGCCTCCTGTCACACAAACGCCAAATGCAATTATGATGGCCAATACGCTCGCTATGCGAACGCACAAAATTCAAGAGCTTCTAAGCAAAGCAAGCGAATGGGGGCGCTCTCTGGGTGAGCACAAAGAGAACATCGCTGACGATCACCAACACCATCAAAATCACACCGACCTCATTGGAAATTTGCTGGGGATCAGTGATCAGggtattctaaataaattactttcatCAGCCGATGAGGCGGCTAAATTATTGGGTGTGGACAAATAG
Protein Sequence: MIKTTATATPQQQQQQQQQLTDSNKHDVQPSPAKMERRNSNTSESSLEHLDLGRTPQKLNIPTSATSTPRIYSTSISSSGDRGGSANGNQNTSVLTKLTTGTGAATVANADRAIGEKTFNEICKKPKTNRHTQNQDSDEANDCDDDDDDDEDSSEEKHRGGNISASRSHRHHHHHHKRRSSGRSLDKRSVQLELNSDNPNSLRKKFRFNRSVTNDSVQPTERTNNNESGFIDASSSSSQFLNASATSLTAMHTKKQSHHQSPENCATGCQSSSSASSSPHGAGASGSSPESGLGERDDMKFVCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTASKHATNSNNNNNNNNNNNNSHNRNTVVGGAAQSDVASTAAAPAAHLTNGTANNERSTKATVEMPPTSETTPNPAAAQTTINGYDAKRRTRLNGGIKEIYDSDGGCSTDSSSGISHDSIKADHNDNNKINNNNNNNKNSNNNDSLINMKANGYSKDYNNSCKRKNIDIIDMDLSYLKRRAKINNLLNSGEENPTDNHPSMIPTSSESNEVDRQTPTEALRQQTHHLFTCPVCNAADFDSLLDLSKHMDNEHCDIPAKCRHCDVIFRTHRQLNVHPCTMANTQPRMKIFARDREFVDEFSNENSPHIPAATVQTPKFTCSKCGCGFVSDNDRDAHMHECHTSQIVQRPLANTEHDIETEVPERSLENQPLSEFAPSTEDAKAEEKNDEEHRCEEFFKRLYLKSKTANAQQRQSSESSHHSVDDDPLDDLKFEADCERVAQQSHDSKDLADIQSILNMTSSSSTSNFLKNFENSVNTPSSNYGLDKDEEEAQDVFTSEFRKMKLRGEFPCKLCIAVFPNLRALKGHNRVHLSASGPSGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSTCDDPTKKLHLFSSPEVDEDVELQYQHHQPNDRSTPVSHLKDMLTGDDGRSHKAVKIQVKSLEQLLDKANVTSAFNESFEEHEQQPPDSDQSPIDLSMDVLDLSKKPAKSSLETPPNALETPQSNAILAAATNDNDNDPKSEMHIPDKNQQYLLAQQHLINDAFPKIVDPAHYFQQLYRNLVFPPINPINPFFLHNSFLPNNLGDLQKYAPLMNRMFTESHAMITDPKTITSDPNLMMPSSIPPQPSPLLSDKSSVSSVASSSPVNTTNAMHNKPIAPSTPPQAINIHRHQNIQSTTLSGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHILRGRGGSNTTAINSITHLQAAISAHSGSSSGHVASASISDQVKYAILAQQLKARKDTDLLHQALAHGSSSITSAHSPLASAANLSRPANSDVQLNFNSLNNNGINNGAPEEEDDPKLVIDEDDDDDDDEDIEEIVDDNEEDLEVAFECRGEAINLKSRSNNRHQSEINDDLLQQIVNKKKPNESAKKVAETILEQAIKAGSTGLNSQSNSGKPNVANSKKSVTTMKTMIAQAESVGKFLKEVASSSFKDESQDLVPVAKLVDNATTNSMSFNNYFRPSDVVNQMEQSDEEGLVASGSASESNNSGTEDISSAAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQRQEEERKRKAEEHARLEREQRNQRNQREQLEQLQQEQQQHQQQQQLLKQLASAQFKQSSQSQITSASMKLESNSAPFAAASAGAGGAASVGSASANAVYSELPFKCHLCDCSFAERIQCLDHIKIQHTQEFSLLLTKGALETDPEHNQGNSAEDEEYRRPPPGSEENTARNGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRHDSSIASCELSNAGNSCSDLSDDEQMPPVTQTPNAIMMANTLAMRTHKIQELLSKASEWGRSLGEHKENIADDHQHHQNHTDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -