Basic Information

Insect: Physocephala rufipes
Gene Symbol: SNAPC4
Assembly: GCA_963966595.1
Location: OZ016505.1:1586478-1588973[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.6 5e+03 -1.9 2.2 3 10 9 16 7 17 0.86

2 6 2.2e-12 3.1e-09 37.2 0.1 1 44 266 310 266 312 0.93

3 6 1.6e-11 2.3e-08 34.4 0.0 3 43 322 366 321 368 0.91

4 6 2.3e-10 3.3e-07 30.7 0.0 2 46 376 421 375 421 0.92

5 6 1.2e-11 1.7e-08 34.8 0.1 4 44 430 471 428 473 0.96

6 6 1.4 2e+03 -0.6 0.2 33 43 519 529 505 529 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.6	5e+03	-1.9	2.2	3	10	9	16	7	17	0.86
2	6	2.2e-12	3.1e-09	37.2	0.1	1	44	266	310	266	312	0.93
3	6	1.6e-11	2.3e-08	34.4	0.0	3	43	322	366	321	368	0.91
4	6	2.3e-10	3.3e-07	30.7	0.0	2	46	376	421	375	421	0.92
5	6	1.2e-11	1.7e-08	34.8	0.1	4	44	430	471	428	473	0.96
6	6	1.4	2e+03	-0.6	0.2	33	43	519	529	505	529	0.79

Sequence Information

Coding Sequence: ATGGACGCTTTTTTAAAAGATGAAGACTGGACTGCTGATGAAGATGACGAGTATGATGACGACTCCGATCAAGTAGAGAGCGAAGTAGATCAGCCATCAGTTAGCgaccaatatttttttcacaattcaAATAATGATGCTTTGAAGAATACGTTTTTGCTTGAGATTGAGCAAATTCTGTGGAAACATAGCGAAGTTAATTGCGCGAATGCACTTGCTCTTAACAAAGCTATGCAAGAGAAGCTAACAGTGGTCCGTTCCAATCTTCAACGACTTTTGGAAggtattaaagcaaaatatgaagaaaatgaaaacaagttGAGAAAGGGTTTGACGCGGCAGCGAAACGGCATCGGAATGCGTGGTGCATACCTCAAAGGCAgtactttttatttcaaaggaAACATGTTTTTCAAGGATGCGAATTGCCGAAATTGTCCAAATAATCCAGACTATACTTATAGGAGTGAAGTAGAGGGTGAAGTTTTTCCCATGGACTTCGAATTAAGGGGTAGGCATGTCTGGTCCATAGCAGACAAAGTAGCCATAGTCCAAGGAATAAAAGAACAGGTTATTGATTACTTAGATCATCGCAATCGTAATTCTAGCAAGATCAAAAACTTAATCGACAAACAAATCTCTGTACACACAGAGAAATTGGGAAATCTGTTGGAGAAGGTCGATGATGCCTTCAAAATTGATTGGACTCTTATTTCTGTACATAACTTGAAACATCGTCATTCTCCTTTCAGTGCCAATGCGATGTGGAATGTGTATCTGAAGCCATCACTAAATCGCGACAATTGGAAAGCAGAGGAAAATAATCGACTCTTGGAAGCTGTTACGAAATTCAAATATGAAGATTGGCAATCGATTGCTGCCTATGTAGGCAATCGTTCCGATTACCAATGCTTCGTCCAATTTTACAATACCAAGGAAGGTTTTCTaagtaaaaaaatcacaaGATGGACCAAGGCTGAAGACAAACGCCTTCTCGATTTAGTCAACACTTACACAATGAATGGTATCACTAATTGGAATGCAGTTGCATCTCGATTCCCTAATCGTTCAAAATTAAGGTGCATCTCACGATATCTATATAGTGTAGATCCGAAAATAAGCCACgATCCATTCACACCAGAAGAAGATCTCACATTGTTGGCTGCGGTTGAGGAATATGGCGAAAATTTTGGCTGTATTCCACGTACTCTTTTCCCCAATCGATCCTCCGCCCAGTTACGTGGTCGTTACAAAAATACTTTGGTTAATCGACACAAAATCAATCTTTGGTCTACCGAGGATGATAAGAAACTTATGAATTTCGTGACCGAGCATGGACCATCTAGTTGGATTAAATGCGCTGAAATGCTCGGAAATCATACCAGAACCAGTTGCAGAACCCGTTATTtaacaattcaaaaatttttacaaaaaaatcccAACGCCAGCATCGAGAATATTCCATCCAAGTTACGTGGCGcagataatttaataactaCCGATAATTGGACTCAAAAGATAGCAGAATTACAAAGGAATCCCGATATCTGccttaaatcaaaaaatcgtTGTAGAAACCGACTTCGAGCGCCAGCCGAGTCTAAGTTATTAAACACTGAACACTCTGGTAAAGACAAAGCAATAGGGgctgataataataaaataactaaaaccCAGAGAATCGGTACTACATACGCTCAAAAACTGCGTGCTATTGAGTTAAAGATGtacaaattctttaaatatgcctacaattttaaattaggcTTGGATCCATGTACGAAGCCGCTGACGGAACCGCAATCATTGATTTTGGTGCAACAAGCTTGCAGATTCCAAGTATCTCAacataattcattaattcgaGATCAAAGTGTGCCAAACAATATCGCTAGAAGGGTTGAAGTAATGTTGACAAGGGATACGGGATGTCCTCAAGGCAGAGAGCTCTTATGCGGTTACCGATTGCCCCCAAGTTGGGCGACTTTAATGGGATTTCGGGCACTGTGCGTACAATCAGCAGAAGCTCTACCAATGGAATTAAATACAGTTCCGAAAATAGAGAATGTTGAGGATATACAAACATTTCGCCAGCGTCTACGGGtcctattttataaaacaggACTACTGAGTCGCCTAAATCctcaaaatatagaaaatttaaatacaaaatacaagcCACAAATAACAACGTTGCtagatttttgtaataaaaacgaCCAACTTAATCCAACCGAGGATTTTATAGATGTTGTATCAAAAacgaaaactgaaaaagatataaaaaaaggaaaacggcGAAAAAGAACATATGATGCAGCGATTAATGCAAAAACATCCGCGGATATTTCAGAGGATTGA
Protein Sequence: MDAFLKDEDWTADEDDEYDDDSDQVESEVDQPSVSDQYFFHNSNNDALKNTFLLEIEQILWKHSEVNCANALALNKAMQEKLTVVRSNLQRLLEGIKAKYEENENKLRKGLTRQRNGIGMRGAYLKGSTFYFKGNMFFKDANCRNCPNNPDYTYRSEVEGEVFPMDFELRGRHVWSIADKVAIVQGIKEQVIDYLDHRNRNSSKIKNLIDKQISVHTEKLGNLLEKVDDAFKIDWTLISVHNLKHRHSPFSANAMWNVYLKPSLNRDNWKAEENNRLLEAVTKFKYEDWQSIAAYVGNRSDYQCFVQFYNTKEGFLSKKITRWTKAEDKRLLDLVNTYTMNGITNWNAVASRFPNRSKLRCISRYLYSVDPKISHDPFTPEEDLTLLAAVEEYGENFGCIPRTLFPNRSSAQLRGRYKNTLVNRHKINLWSTEDDKKLMNFVTEHGPSSWIKCAEMLGNHTRTSCRTRYLTIQKFLQKNPNASIENIPSKLRGADNLITTDNWTQKIAELQRNPDICLKSKNRCRNRLRAPAESKLLNTEHSGKDKAIGADNNKITKTQRIGTTYAQKLRAIELKMYKFFKYAYNFKLGLDPCTKPLTEPQSLILVQQACRFQVSQHNSLIRDQSVPNNIARRVEVMLTRDTGCPQGRELLCGYRLPPSWATLMGFRALCVQSAEALPMELNTVPKIENVEDIQTFRQRLRVLFYKTGLLSRLNPQNIENLNTKYKPQITTLLDFCNKNDQLNPTEDFIDVVSKTKTEKDIKKGKRRKRTYDAAINAKTSADISED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -