Pruf020801.1
Basic Information
- Insect
- Physocephala rufipes
- Gene Symbol
- lola
- Assembly
- GCA_963966595.1
- Location
- OZ016505.1:25723648-25725974[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-11 4.8e-08 33.0 0.0 3 45 423 465 421 465 0.90
Sequence Information
- Coding Sequence
- ATGGTTGAACCCGCTTTACCGCCGCCACCGCTACCGTTGCCGCCTTGCACCGAGACTCAGACATTCTGCTTGCGCTGGAATAATCATAAATCGAATTTAATCGAAATACTTGATGCTCTGATTAAGGTTGAAAGTTATGTCGATTGCACCATCATCGTCGACGATCAAGTTCAATTTAAGGCGCATCGTGTCGTTCTCGCCGCCAATTCGCCATATTTCCAAAGCATTCTGCAAGACGTGCCCATGGATCATTGCATCATCATATTTCCCGGTGTTAAGGCATTCGAAATGCGCGCCCTACTCGAGTACATGTATACCGGCGAAGTGAACGTCACCCAAAATCAGATACCACAAATCATGCGTATCGCTGAAGAGCTCGAGGTCAAAGGTCTCTTCGATATGACCGACCTCAAGGAGAAGTTCAATAAATGCAATCAGGGCCAAAGTGATAGCGTAGGAGCGGTGGAATCGTATCCGGCAGAGGGTTCTATGCCATTGCCATCACCCTCACACGATATATCGGGTCATCGTAATggagcatcatcatcattacttCATTCCACATCAGCGAtctcaaattcaaataatatcacCTCCTCCTCATCGGCAGCTACCGCGCATCCTTCGAGTAGTAGTTCCTCACCACCCTATAGCAGTTATAAGGGGCCATATTCAACACCTCCTACATCGACCACACAATCCAGATCGTCATTGGCAgccgcacaacaacaacaacagaacacgcaccagcaacaacaacaacagccggATCAACCTGGTATTCCTGGTGGGAGTGAACGCCCCCATTGGCCAATATCACCCAGCATGCCAGCTGCAATGTTAAGTGCCGTTTACGAATCTGCTCCCGATATGAATCCTTTAAAACGTAAAAAGCTCTCATCGATCTCGAGTATGCTAATGAGCCGCGGCGACACTCCCATTTTACGCAACGTCCTTGCCCAGACTAATGCGGCGGATTCGTCACAACCCATTTCAATGCTCTTGCAAAATCCACCAACGAAACCGGATAAAGGAGCCGCCGATAAAGGAGTAATAGCCGCGCCGTCTCAAAGCAGTAATAATAGCTTCAATGGAGCCGACTATTCCAGTGATCGAAAATACCCCGACGAAGCACATTCTCCATACACAGATCGTTCATTTGAGGATGAGACTTATGATCCGAAGGGCAGTTTTTCATCAAGCTTTCACAGCGCAAATTCAAGCAATCAGAAGCCGGAATGGAAACGTTATAAGCAATACACACGTAACGACATCATGTCGGCAATACAGTGCGTTCGTGATGGTATGAGTGCTCTTCAAGCATCACGAAAATTTGGCGTACCGTCACGAACGCTATACGATAAGGTTAAGAAATTGGGTATTACGACTGGACGCCCGATGAATCGAACAATGAAGCGTAGTCCGAGTAATATTGAATCATCTGCTGCCTTCCCTTACGGTCACGGTTACGTTCAAACTGAACAGTTATTGGCATCTATGACGGAACAACGCGACCAACATGACCACCTCTCAAAAGATCCTCATTCTCGTGATGAACATTCCATAAAAACTGTTGCCACTATTCCTCAACAAGCAGCGGCTTTAATTGATCATGCGTTAATTCAGCAAGCGCTCGAGAATCGTGGTGGTGACTTGGCCGGGCGTGAGGCTTTACATGCTATGGCCCTAGCTGCTGCCGCACATGCTGCCGCGAATCGTATGCCTACCAGTCCTGCTCACAAAAGCATCAATCGCTCACCGACTCCCAGTCCACGTTACGAAGTCAGCGTCGGTGGGGGCATGAATTATGCGCGGAATAGGAATGATCACCTATCCATAGAAAGCGAGCACGAACGAGAACGAACGATAATGCGGAGTGATTCGTTACATCAGAGTAAAGATTCAAGTTATGAGTTAGAGCATGAAAATTCGCGCGATCGTGAACGCGAACATGAACATGAACATGAACGCGAGCATGATCGCGAACACGATCGTTACattgacgacgacgacgatcAAGTTGAAGATTTATCGATAACACGCCGTCAGGATTATCGTTCGCCATCAGATGTAGCCCGCACGAATTCACCTTGTTCGTCGAAAAATTATACCGCTGAGGAAAGTTGCGGAGTAATCGTGCCACCGATCATTTGCAAACCTGAAAAATTCCTAATGAGCGAAGTTAGCGTAAAGCAAGAGCTCACCGACTGA
- Protein Sequence
- MVEPALPPPPLPLPPCTETQTFCLRWNNHKSNLIEILDALIKVESYVDCTIIVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCIIIFPGVKAFEMRALLEYMYTGEVNVTQNQIPQIMRIAEELEVKGLFDMTDLKEKFNKCNQGQSDSVGAVESYPAEGSMPLPSPSHDISGHRNGASSSLLHSTSAISNSNNITSSSSAATAHPSSSSSSPPYSSYKGPYSTPPTSTTQSRSSLAAAQQQQQNTHQQQQQQPDQPGIPGGSERPHWPISPSMPAAMLSAVYESAPDMNPLKRKKLSSISSMLMSRGDTPILRNVLAQTNAADSSQPISMLLQNPPTKPDKGAADKGVIAAPSQSSNNSFNGADYSSDRKYPDEAHSPYTDRSFEDETYDPKGSFSSSFHSANSSNQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNIESSAAFPYGHGYVQTEQLLASMTEQRDQHDHLSKDPHSRDEHSIKTVATIPQQAAALIDHALIQQALENRGGDLAGREALHAMALAAAAHAAANRMPTSPAHKSINRSPTPSPRYEVSVGGGMNYARNRNDHLSIESEHERERTIMRSDSLHQSKDSSYELEHENSRDREREHEHEHEREHDREHDRYIDDDDDQVEDLSITRRQDYRSPSDVARTNSPCSSKNYTAEESCGVIVPPIICKPEKFLMSEVSVKQELTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200987;
- 90% Identity
- iTF_01200987;
- 80% Identity
- iTF_01200987;