Pruf021503.2
Basic Information
- Insect
- Physocephala rufipes
- Gene Symbol
- kn
- Assembly
- GCA_963966595.1
- Location
- OZ016505.1:35899171-35926591[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-233 7.8e-229 761.2 0.0 11 385 107 497 97 500 0.97 2 2 1.5e-10 1.8e-06 27.0 12.0 423 508 501 592 498 603 0.76
Sequence Information
- Coding Sequence
- ATGGTAAATATTCGTACGCGCCTTTTTCTCAACAAAGTGAAGGAGTTAATCGCCGCCACTTCGTTACAAACGAGGGTACGTTCCATACCCTCAGTACACATACCCTCGCAGCCTCTGAGGGATAAGCCAAAAACCAGCTTCAAGCTGCGTTCGGACGAGCCCGTACCGGGCTTTGGCTCGGCTTCGGCATGGCCAACATTAGACTTAGAATGGGGTCGAAAACTGTACACATCAACGGGCCCAAGGACCGCAAGTGGGCTCATGTTTGGTCTGCCACCCACTACCGCTGACATGAATCAACCACGCGGTCCTATCACGTCCCTGAAAGAGGAACCTTTAGTTGCAAGAGCATGGATGCAACCTGTAATCGATCAGTCGAATTTGGGTATCGGTCGTGCGCATTTTGAGAAACAGCCGCCCAGCAATTTGCGCAAATCGAACTTCTTTCACTTCGTCGTCGCACTTTATGATCGTGCGGGCCAACCGATTGAGATCGAGCGGACAGCGTTTATCGGCTTCATCGAAAAAGATTCGGAATCAGACtcaacaaaaaccaataacGGGATACAATATagattacaattattatacgCAAATgGAGCCCGCCAGGAGCAGGATATTTTTGTGCGCCTCATTGATTCGGTTACGAAACAGGCCATCGTTTACGAAGGGCAGGATAAAAATCCGGAGATGTGTAGAGTTCTGTTGACTCATGAAGTTATGTGCAGcCGTTGTTGTGATAAAAAAAGTTGTGGGAATCGAAATGAGACTCCTTCCGATCCCGTCATTATAGATAGattctttctaaaattctttttgaaatgcAATCAAAACTGTTTGAAGAATGCTGGAAATCCGCGTGATATGCGAAGATTTCAAGTTGTGATATCAACACAAGTGACAGTCGATGGACCACTATTGGCTATATCCGATAATATGTTTGTCCATAATAATTCGAAGCACGGACGCAGGGCAAAGCGTCTGGATACCACGGAAGGTACAGGAAATTCCCCACTGTCTATTTCGGGTCATTCCCTTGTGCCTGACAGCACCTACGATGGATTATACCCACCACTACCTGTGGCTACACCATATATTAAAGCCATATCACCCAGCGAGGGTTGGACATCCGGCGGTGCAACCGTTATTATAGTTGGTGACAATTTCTTTGATGGTCTTCAAGTAGTTTTCGGCACAATGCTCGTATGGAGCGAATTATTAACATCCCATGCAATACGTGTACAAACTCCACCTCGCCACATACCGGGAGTAGTTGAAGTGACACTCTCttataaaagcaaacaattctGCAAAGGATCACCAGGACGTTTCGTTTATGTTTcttTAAATGAACCGACGATAGATTATGGTTTTCAGCGTTTGCAAAAACTTATACCGCGTCATCCCGGAGATCCAGAAAAGCtgcaaaaggaaattattttaaaaagagcGGCTGACTTAGTCGAAGCATTATACTCAATGCCAAGATCACCCGGTGGTAGTAGCGGCTTTAATTCGTATGCCGGTCAATTGGCAGTAAGCGTACAAGATGGTAGCGGTCAATGGGCCGAAGATGATTATCAAAGAGCCCAATCGAGCAGTGTAAGCCCACGCGGAGGCTACTGCAGCAGTGCGTCAACTCCACATTCATCTGGTGGCTCGTACGGAACCACCACTGCCATGACAAATAGCTATGGAGCCACATCAAATCTGAATGGTCTGCCATCTTCACCCGGGAGCGTTTTCAATACCACAGCGATGTCATCACCCTGGCATCAAGCTCTAGTCCAACATCATCACACACATCCACACCAGCATCACCATCCGCATCAGCCGTGGCACAATCCGGCCGTAACTGCAGCCACTGCAGCTGTTTAA
- Protein Sequence
- MVNIRTRLFLNKVKELIAATSLQTRVRSIPSVHIPSQPLRDKPKTSFKLRSDEPVPGFGSASAWPTLDLEWGRKLYTSTGPRTASGLMFGLPPTTADMNQPRGPITSLKEEPLVARAWMQPVIDQSNLGIGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSPLSISGHSLVPDSTYDGLYPPLPVATPYIKAISPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWSELLTSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSSGFNSYAGQLAVSVQDGSGQWAEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTTAMTNSYGATSNLNGLPSSPGSVFNTTAMSSPWHQALVQHHHTHPHQHHHPHQPWHNPAVTAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00251134;
- 80% Identity
- -