Pate012700.1
Basic Information
- Insect
- Phymatocera aterrima
- Gene Symbol
- pnr
- Assembly
- GCA_963170745.1
- Location
- OY720663.1:7651841-7656412[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.43 1.7e+03 -0.9 0.1 8 15 83 90 76 93 0.85 2 3 3.3e-18 1.3e-14 53.9 3.2 1 34 183 215 183 217 0.97 3 3 5e-19 2e-15 56.5 6.2 1 35 242 275 242 276 0.98
Sequence Information
- Coding Sequence
- ATGTTTCACGGAAGTAGCAGCACGGGGTACGGCGCAGGCTCGGATTATCAGCAACAATcccagcagcaacagcaacagcagcagcagcagcagcaacagcaacagcaacagcaacaacaacaacaacaacatacTCAGCAATTACAGTCTCCTGTATACGTTCCGTCTTCAAGACCCACTTTGGCGTCGGCGGCCACCGCCGCGCAATATCATCCCTTTTCGACTTCCGCGTCCCCCGCTTGGGAGAAGACACCTTCATGGCAACACGGGGTTGAATCTTATGCGGCCCATCACGCTCTGACAAGTCATTCAGGTACATCTGCAGCCGGTATGGGACCTCACGGTCCCCATGTCCCTCATGGTCCTCATACGAGCCACCCTCATTCTGCCCATCCTCATTCAACcttagcagcagcagctgcgACGCCATTTTACGCGCAAAATGTTGCCATGATGTCATCATGGAGAGCATACGAAGGTAGCGGATTTCAGAGAGCTTCACCCTACGACACAGcaatggattttcaattcggCGAAGGAAGGGAGTGCGTGAATTGCGGTGCGATATCCACCCCGCTATGGCGAAGGGATGGCACAGGACATTACCTGTGCAACGCCTGCGGACTTTACCATAAAATGAACGGAATGAATCGTCCACTTATAAAGCCGTCCAAGCGCCTCATCTCTGAATTTCAGACCGCGACAAGACGGCTTGGCCTCTGCTGCACAAACTGCGGCACGAGGACTACAACCCTGTGGAGAAGGAACAACGAAGGTGAACCGGTGTGCAATGCCTGTGGGCTGTACTTTAAACTTCACGGAGTAAACCGTCCCCTAGCTATGCGAAAAGATGGAATACAAACGCGGAAAAGGAAGCCGAAAAAAACGCCGGAACCAAACCAAACTAGGCCTTCTGGTGACCACGATCAGACTTCTACATCAACAACTTCTTCACCCTCTGGAGCGGAGCTGAAACCGAgtcaacaacaacagcagagATCTCAACAGCAACAAATGGATAATCCAAAAGCATCCCACTCCACGGTATCATCCGACAGGCCAGTTTACCTTGGACACACCTCACTTCTATCGAGTACCGGAACAACAACAGTAAAAGCAGAACCTAGGACATGCGATACAGGAGTTAGCCAACAATATGCGTCTTACTATCACCACCCTCATCAGCTTGGAACTCCTGTTAGCGAACACCAACAGCAAAGTTACTACGGAACACAAGAAGCCCCATACCATCATCAGCACCATGTTACCGCAGCAGCAAAATTACTTGCTTCCTCGTAA
- Protein Sequence
- MFHGSSSTGYGAGSDYQQQSQQQQQQQQQQQQQQQQQQQQQQQHTQQLQSPVYVPSSRPTLASAATAAQYHPFSTSASPAWEKTPSWQHGVESYAAHHALTSHSGTSAAGMGPHGPHVPHGPHTSHPHSAHPHSTLAAAAATPFYAQNVAMMSSWRAYEGSGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNQTRPSGDHDQTSTSTTSSPSGAELKPSQQQQQRSQQQQMDNPKASHSTVSSDRPVYLGHTSLLSSTGTTTVKAEPRTCDTGVSQQYASYYHHPHQLGTPVSEHQQQSYYGTQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411970; iTF_00175431; iTF_00940040; iTF_00939180; iTF_00060766; iTF_01303858; iTF_01049304; iTF_01048557; iTF_01412763; iTF_01413819; iTF_00174686; iTF_00176068; iTF_01414623;
- 90% Identity
- iTF_01412763;
- 80% Identity
- -