Pate021622.1
Basic Information
- Insect
- Phymatocera aterrima
- Gene Symbol
- Zfy1
- Assembly
- GCA_963170745.1
- Location
- OY720673.1:2674313-2680895[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.6 1.7e+02 3.4 1.7 1 23 142 167 142 167 0.96 2 18 0.0031 0.33 11.9 5.4 1 23 174 197 174 197 0.97 3 18 0.0078 0.82 10.7 1.2 2 23 213 234 212 235 0.95 4 18 5.6 5.9e+02 1.7 3.7 1 23 241 263 241 263 0.97 5 18 0.036 3.7 8.6 0.5 2 23 269 290 268 290 0.97 6 18 5.4 5.7e+02 1.7 1.7 6 23 557 574 555 575 0.84 7 18 0.0078 0.82 10.7 2.0 2 21 586 605 585 606 0.94 8 18 0.62 65 4.7 0.1 3 23 900 920 898 920 0.94 9 18 0.025 2.7 9.1 0.3 1 23 928 950 928 950 0.98 10 18 0.62 65 4.7 1.0 2 23 1047 1068 1046 1068 0.93 11 18 5.1 5.3e+02 1.8 1.1 3 23 1080 1100 1078 1100 0.82 12 18 0.0033 0.35 11.9 0.2 1 23 1177 1199 1177 1199 0.98 13 18 0.037 3.9 8.5 0.3 1 23 1271 1293 1271 1293 0.97 14 18 4.8e-05 0.005 17.6 0.5 1 23 1299 1321 1299 1321 0.97 15 18 0.0055 0.58 11.2 2.6 1 23 1373 1395 1373 1395 0.97 16 18 0.0015 0.16 12.9 1.7 1 23 1401 1423 1401 1423 0.99 17 18 1.1 1.2e+02 3.9 0.1 2 23 1520 1541 1519 1541 0.97 18 18 2.9 3e+02 2.6 0.2 3 23 1550 1570 1549 1570 0.88
Sequence Information
- Coding Sequence
- ATGGCCGACTCGCTTCCCCGTCTAAGAGCATTGCGTCCTCGACCTCAACTTCAACCGGCATCACAGGCACCCCCGACGCCGATCATCAACCCCTCGAATGAATTGAATCATGGAGAAATAATCGAGGATGAAGATGAGCCGATGGAACAAGACCAGGAAGAATCACTGGAAGACATTTCTAGAAGCGAAGGAGGCAAAGACGTAATCATTGAGGGTGCCGATATTACCGACGATGATGAAGCCACAGTTATGGCcgatgaagatgaagacgaAGATGACGCAGCGGTCGACGAAGATGATgaggaacaagaagaggaggaggaggaagaagacgatgatgacgacgaGGGAAGATTGATCATCAAAGAGGAACCTGTTGAAATTATACCCCCAATCAATAGAGAGGAGGAAACtaataaaatttatgaatgtACTACGTGTAAACCTCCCAAAGAACTGAACAGTCTCAAAAACTATCTccatcatttgaaaaaagaacacaaacagAGGgTCAGGTGTTATGAGTGTCCGCATTGCGATTTCGTGTGTCAACACGCGAAAAAATTACAGCGTCATTTCCGAGTAGCTCACGAAGATCTACAGGATAAAGTAGCCACAGAATCTGCTGAAAGAAGTCGATGTCCAATGTGCGCACACGTTGCCGCCAATCAACGTGATCTGGAAACACATCAACGTGTTCATCACCTCAAAAGACGATTTTTCCGCTGCGCAAAATGCTCATATGTCACTCACGTCCGAGCCAGATACACAAAGCATGTTAAATATCATTCTATGCCTATGATCAAGTGCGATGCCTGCGATTTTCGCACTCCTTATAAGTGGAACTTAGATCGACATACTAGGAACCATGGGGGAGGTGGCGCTTTTCAATGTCGTGCTTGTAACTTTACTGCCGACATCAGACAGAGCCTTACCGTTCATGAAATGAATCATCATGATCCACCTGTTGGACAGCCACATCGAAAACCCAATAATCCTTGTGAACGAAAACCACGGAATAGCCCAAAACGTTATAATCAGGTTGGAGCCAGTGACTTTAGAGACAATACTACAAAATCTTCTGCAAATTCAACACCTGTGAAGTCTAGGAGTCCAAGCAAATCGTCAACTCCTCGGAAATCTGTTACCCCAGATAAACGGGATCTCTTTGACGAAAGAAACAGCGTTATAGCTGGAGCTGAATGCATAGCTTTAAAATGTGAAGAAACAGGATGCCAATTCATTACAGCATGGGATTCGGAAATGCAACGTCACCTGGCTGAATCTCACGCACCTTTGATCATCAGTAAACCTCGGAAACCTTTACCCATGCTTATTCCTCTCGGAACTACTAGTTCTCCTAAACCAAATAACATTGGAGCAGGCGGCAGAGGAAACACAACGCTTTTGAGGGTGCCTAGAGTCAGAGTGCGCCCAGAATTGGCGCAAATTGCACGGGACACAGAGATGGCAAGATTATACGGGGAACAAGAGAGTTTAGCTACCAAGAGGGATTTAAGTGGTAGCGGCGGAGACTCTTTTGAAAAGAAGAATGCATCGTTTTTTGACAAACTAAAAGAACGGTTGATGACTACGAGCACATCGAATAACGGAGGAAGGTCGGACACAGTTAATGGAAATTCTAGTACAATAGATTTGAAATGCTGGTGTACTTTTGAAGCTAAAACTACAGAGGAGTTGTCTAATCATCGGCGAACTCATCACGCAGCTCTTAGCGTTTCTCTCGGATCTTCTAGATGTCCAAAATGCCGTAGGCGCTGTAAAAGTTCAGCCGATTTACACGCACATTTACAAATTTGCCAAACTGCTGTTGAGGAAACTGCTGCTATTAATGataattcacaaatttatcTCGATGATCGTCCTACGGCTTATCGCGGGGAATATACATTCCCTTTTCAAGTGGACTGGGATTCAAGTTTTACGGGACTCAATTCTTCAGGATCGTCGGTGGAAAGCGGTTCCACTCAGCAAAGCGGTCGTAGAGTGTTCAAATGTCCTCATTGCGCTTTCTGGGCTTCTACAGCATCTCGTTTTCACGTTCACATCGTTGGACATCTAAACCGTAAACCGTTTGAATGTTCTTTATGTTCTTATCGCTCGAATTGGCGCTGGGATATCACCAAACACATCAAACTCAAAGCAGCCAGGGATCCGGCTCACACCTCTGCCAGAGTTCTCATGACCGATGAAACTGGGCGACGAAACTAttctaaatataataaatacctTGCTCAGGTACAGCAGCAACAGTTGCAGTTGTCTGATGAGCAAGGGTGCGATGAACCACCGACAAAAATGATTTTGACTGATGATTCTGAGTATAGACATCCTCCAGAATTGACGCCGGCTCCAAACGCCGCATCTATAGGTCTTAGTGCGTCCCTGGAAGTTTCTACACTATCCTCAAGACCCCCACCACCCTTAAAAGCAGCGAATCGAGGCCAAGGCCAATCTTTGTTAAAGAGTAGCCCGACTTCCTCGTCATCCACTTCTACAGCGTCAGTTACGATATCTGTACCTCCCACTAATAATTCTGAAGAAGCTAAACGTACGTTGTGGAAATGTAAAAGATGTAATTTTAGAGATTCCAGCAAAGAAGCGGTAGTGCTACACGTTAAATCTCACTATGAATCTTCTTCGCTAGTACCTGATAACGCACAGAAAGTGTTTGGCTGCGGAGATTGTCCGTTCGCCGCATCCACCGCTGCTTCCCTTGCTGCACATCGTGTACATCACAGACCAAATCTAGGAGCTATCTTCAAATGTTATCTCTGCCCGTTTTACGTCAGTACCAAGGGAGAGTTATTAGACCACGCCAGACTTCACGGCGAAGAATTAGCTGCGGAACACCAGCGCAATATAGAATCGGAAAGTAGCTCGGCAAAGCGGAAATATCAACGTATATTGCCagCGATCAAAACCAAGTCTGAAGATTCTCAGATTGAGGAAATAGTTCGTGTAGCTCCAGCCTCAGCCTCTGATTTAACATCTACGAGATCAAAGTCTACAATAAGCGGTGGAATTCCACCACCCCTATTACTAGATACTAGAGCTCTTCCTGATGCACCTCTAGTCTGGGTTTCCCGACCCGACGGAAGCCTATCAAAGATGTTAAAGTGCCGCCACTGTCCCCACGTCGCTTCTCGTCGAGCTGAAGTGAGGGATCACGAAGGAATGCACCTCTCTCCCCCAACCCAAGGGATTCTAATCAACTGTACAGACTGTAATTTTACTTGCGCTCGTCGGGATATTATGGATTCACATACTGCTATGCATTCTGGAGTTCTAGGCACTGTGCATTGCCTCGTGGATGAAGGACGTCCTGATAATCAACAGATCAACGATTTAGCCACGCTTCTTGGCCTCCCTCAGCCACCCATTTTAGGCGGCGAACCAGATCTACGAGATTCTAGACTTGTACATTGCTGTGGTAAATGCCCAGCAAGGTTTTTATGCGAAAAAGAACTGCGCATTCATTTACGTTACCACTCTACAGAGCTTGCATATTCTTGTCAATGGTGTTCTTACGCCGCTAGACAACCCGCGCATCTTCTAGCTCATCAAAAAGCTCACTCCCCTGAATATCAGGAGCGAACACGTTATCTACTTTCGTTATATGGTCACTCACAACGACATCCACCCCCCACTACAGCCTGTGTGGAAGCTAATAATCATTCGTCATTGGCCGCTGGGATTAACGGGGTTGCATGGATCGTTGTAGAGATTAATTCAGGACCTGGAACTAATTCTGGCAGCCTCGGTAATCCGGATAATGGAAATCAAGTCTTTACATGTGCAAAATGTCCCGCGAGATATTTTAAACTCGACGCTTTAGAGTACCACATGACTTTACATGGGACAAATAATAGATTCAAATGTTCAGAGTGTGATTATTCGTCTAAAACGGCACAGAATTTAGCTAAGCACCAAGTTGTTCATCGACGACATGCTGAAACTAATGAAAGTAGTAATACAACTAGTGTTCCCGGTAGATCACCACCTCCTGATCCTCAATTTGGTATTTTGATGCGCGGTAAtccgaattttgtttatcctggatatttgagaaatggacgactgaaagaaaaacgatatAAATGTCACAAGTGCCCATCAGCttttgaaaaacgagaacaatacAGGGTGCATCTTACCCTGCATGGAGCCAAGCAAAGATATCGATGCGACACTTGCGATTACTCTGTTAAGTATTACGCGAATTATGTTCAACATCTTAAAAAACATCAAGCTAACGCAGAAGCTCAAGCTTCTAAACGACAATATGAAGACGACACAATTTCAATTGATAGCGATATTGCACCTGAACAAAATACCATACCGATCTCTAGATCGGGTAAATCTTTGTCCAAATCATCGACTATTGCTCCTTCAGGGACCAATAATAACAGTGGCACTAACTCCACGTATTGTCCAACTGCAATTGTTGTTTCAAATCAGGATAAACAGTCGATGATATTAATGCAGAGAAAGGGAGCCTTACAAGCGTCTgttgaaattgaagaagaatctATCAGATGTCAGAGCTGCCCTTTTGGCACTCCGGATAAGGAGGCAATGGATGCTCACAAAAGGAGACACGGTATCGAAAGAATGACGCCGCCCTGTCCACATTGTGATTATGTACCgcgaaaagatgaaaatgctAATGAACACGTTAGGCTCCATTTTACGAGACTTTATAAACCTGAATCTTATTTGATCGCAGAGTTATTAGCTCTGCGTGTACATCCTTTGAATAAAACTAAAAACGGTCGCCCGGAGAAAAGAGATGACGGGGGCGATGAGATTCTTTTTAAAGAATGCATCGACGGAAGGTTTCTTCCTCCCTTAGATGCTTTACCTTATGCCCAAACCTCACCTTCTACTTCTAATATGGCATTTCAAGAAAAAGTTATCGTCGATCCTAATACAGGTGAAGCTAAGCATCCCCTTGTTACTTAG
- Protein Sequence
- MADSLPRLRALRPRPQLQPASQAPPTPIINPSNELNHGEIIEDEDEPMEQDQEESLEDISRSEGGKDVIIEGADITDDDEATVMADEDEDEDDAAVDEDDEEQEEEEEEEDDDDDEGRLIIKEEPVEIIPPINREEETNKIYECTTCKPPKELNSLKNYLHHLKKEHKQRVRCYECPHCDFVCQHAKKLQRHFRVAHEDLQDKVATESAERSRCPMCAHVAANQRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHEMNHHDPPVGQPHRKPNNPCERKPRNSPKRYNQVGASDFRDNTTKSSANSTPVKSRSPSKSSTPRKSVTPDKRDLFDERNSVIAGAECIALKCEETGCQFITAWDSEMQRHLAESHAPLIISKPRKPLPMLIPLGTTSSPKPNNIGAGGRGNTTLLRVPRVRVRPELAQIARDTEMARLYGEQESLATKRDLSGSGGDSFEKKNASFFDKLKERLMTTSTSNNGGRSDTVNGNSSTIDLKCWCTFEAKTTEELSNHRRTHHAALSVSLGSSRCPKCRRRCKSSADLHAHLQICQTAVEETAAINDNSQIYLDDRPTAYRGEYTFPFQVDWDSSFTGLNSSGSSVESGSTQQSGRRVFKCPHCAFWASTASRFHVHIVGHLNRKPFECSLCSYRSNWRWDITKHIKLKAARDPAHTSARVLMTDETGRRNYSKYNKYLAQVQQQQLQLSDEQGCDEPPTKMILTDDSEYRHPPELTPAPNAASIGLSASLEVSTLSSRPPPPLKAANRGQGQSLLKSSPTSSSSTSTASVTISVPPTNNSEEAKRTLWKCKRCNFRDSSKEAVVLHVKSHYESSSLVPDNAQKVFGCGDCPFAASTAASLAAHRVHHRPNLGAIFKCYLCPFYVSTKGELLDHARLHGEELAAEHQRNIESESSSAKRKYQRILPAIKTKSEDSQIEEIVRVAPASASDLTSTRSKSTISGGIPPPLLLDTRALPDAPLVWVSRPDGSLSKMLKCRHCPHVASRRAEVRDHEGMHLSPPTQGILINCTDCNFTCARRDIMDSHTAMHSGVLGTVHCLVDEGRPDNQQINDLATLLGLPQPPILGGEPDLRDSRLVHCCGKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPAHLLAHQKAHSPEYQERTRYLLSLYGHSQRHPPPTTACVEANNHSSLAAGINGVAWIVVEINSGPGTNSGSLGNPDNGNQVFTCAKCPARYFKLDALEYHMTLHGTNNRFKCSECDYSSKTAQNLAKHQVVHRRHAETNESSNTTSVPGRSPPPDPQFGILMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYVQHLKKHQANAEAQASKRQYEDDTISIDSDIAPEQNTIPISRSGKSLSKSSTIAPSGTNNNSGTNSTYCPTAIVVSNQDKQSMILMQRKGALQASVEIEEESIRCQSCPFGTPDKEAMDAHKRRHGIERMTPPCPHCDYVPRKDENANEHVRLHFTRLYKPESYLIAELLALRVHPLNKTKNGRPEKRDDGGDEILFKECIDGRFLPPLDALPYAQTSPSTSNMAFQEKVIVDPNTGEAKHPLVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00060728;
- 90% Identity
- -
- 80% Identity
- -