Basic Information

Insect: Phymatocera aterrima
Gene Symbol: -
Assembly: GCA_963170745.1
Location: OY720659.1:8409946-8414099[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.038 4 8.5 3.3 1 23 46 68 46 68 0.96

2 13 0.13 14 6.8 3.3 1 23 109 132 109 132 0.98

3 13 3.7e-06 0.00038 21.2 1.5 2 23 139 160 138 160 0.97

4 13 8.9e-06 0.00094 19.9 4.6 2 23 167 188 166 188 0.96

5 13 1.6e-05 0.0017 19.1 0.3 1 23 194 216 194 216 0.95

6 13 0.00055 0.058 14.3 4.7 3 23 225 246 223 247 0.95

7 13 0.00032 0.034 15.0 1.9 1 23 267 289 267 289 0.97

8 13 7.1e-05 0.0074 17.1 1.2 1 23 984 1006 984 1006 0.97

9 13 6.9e-05 0.0073 17.1 0.4 1 23 1013 1035 1013 1035 0.99

10 13 3.2e-05 0.0033 18.2 0.1 1 23 1043 1066 1043 1066 0.97

11 13 5.9e-05 0.0062 17.3 7.3 1 23 1072 1094 1072 1094 0.98

12 13 0.00088 0.092 13.7 6.4 1 23 1100 1122 1100 1122 0.98

13 13 1.7e-06 0.00018 22.2 1.1 1 23 1128 1150 1128 1150 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.038	4	8.5	3.3	1	23	46	68	46	68	0.96
2	13	0.13	14	6.8	3.3	1	23	109	132	109	132	0.98
3	13	3.7e-06	0.00038	21.2	1.5	2	23	139	160	138	160	0.97
4	13	8.9e-06	0.00094	19.9	4.6	2	23	167	188	166	188	0.96
5	13	1.6e-05	0.0017	19.1	0.3	1	23	194	216	194	216	0.95
6	13	0.00055	0.058	14.3	4.7	3	23	225	246	223	247	0.95
7	13	0.00032	0.034	15.0	1.9	1	23	267	289	267	289	0.97
8	13	7.1e-05	0.0074	17.1	1.2	1	23	984	1006	984	1006	0.97
9	13	6.9e-05	0.0073	17.1	0.4	1	23	1013	1035	1013	1035	0.99
10	13	3.2e-05	0.0033	18.2	0.1	1	23	1043	1066	1043	1066	0.97
11	13	5.9e-05	0.0062	17.3	7.3	1	23	1072	1094	1072	1094	0.98
12	13	0.00088	0.092	13.7	6.4	1	23	1100	1122	1100	1122	0.98
13	13	1.7e-06	0.00018	22.2	1.1	1	23	1128	1150	1128	1150	0.98

Sequence Information

Coding Sequence: ATGATTTCAACAAGTGAAAAAACTTTTCCAGAGTATAAAATCTCgttcaaaaaagaaaactactCGATACATCCCGAATCAAACAAATCAGATGATGAAACCGTGGAACAAATAGGCAGCGATTTGTGTCGCAAGCACGTTTGTTCCTTTTGCCAAAGTTCGTTTACTAACAAAAACCTGTTTTTCGATCATTTGGCTAACCACGGAATAGAGATACCGCAGAATTACTCTGTTTTTATTAGCCCAAAAACCGACAGAGATAGCGAATTATCTTCACataaaatcgaaaatgaaaattcgcaTACAGCTTTAGTAGTTAGACCTTTCAAATGTAATTTATGTTGTTTAGTATTTGACAGAATTTCACAATATGATAAACACAGACGCAGTGTACATAGTAAAGAAAGATCTCAGGTCTGTCATATATGTGGAAAGGGTTTTTTCCGACAAACTGATCTTAAAACCCATCTCAATATTCACTTGGGCACTAATAAATGCGTTTGTGAAATCTGCGGCAGAAAATTCAATCATGTATCTAATTTGACAAGACACAGTAGAACGCACACAGGAGTGAAACCGTACCCATGCACAATATGCGGGAAGAGATTTACACAGATAAATACGCTAGCGAGGCATAAAGTAATTCACAAAAGGGGAAATGAGATATTGGATTGTTGTTTCTGTGATAAACGGTATAAATCTGAAAGCGGTCTCAAAGAACACATGAGAAAGTTACACCACTTCACCGGAAAGTCCCATCGCGAGGATCATATTAATGGTAGAATCATAAAACGCCAACACTATTGTAAAATCTGTGGAAAAAGTTTTCAATTTGTCGAGCTGCTTAGAGTTCACGAGAAATCACATCAGAATGTTCAGACATTGGAGTGCAAAAGTTGTCATCAGaaatttcagaagaCAGAGGAAATCAAGGAACACAGATGCGGGCGGGTAAAAATATCCAACTCAAATGTAATGAAGACTACAAAAACatttaaaaacaaaataataagaGATGATGAAAACAGATCAAATTCATATGGAGAGAACAAAAGCGTTTTAACACAACTTGTAGGAATGAACGAAACTTCTCTGGAGCAAGTTGGCTcaaatgaaaatcatgaaGCTACAGAAAATCGGAGAATAAACAAACCGAAAAATTTGATGGATCATGAACTAGGAGAAAAATTATGTCCTGAAACAATTATTAGCTCTAATAGTAATACACTGGCTGAGGATAAACAAACTAAAGAAACTATTGTTTATATTACGACCAAACAGCTGGCTAATATGAATGCGGAACAAGTGGTTGACACCGCAAATCATTTCCTCCATCAACACTTAATGGAACTTGCAGCCGAAAGTTCCTCACAAACTGATAATATCAGCTCTCGGGATTGTGATGGAGAAACTGTGGTATccgagatgataaaaaattgctggaaagaaattgaacTGCCAGATGTAATCGAATCTGAAATATCAGAGAAGAGGGATTCTCTCACTTCGAAGAATAATACTCAAAGTATTATCTACATACACGCGTTAGAGAAAGACAGTCTCATATTTCTGAACGAAATGGGTGGAAATTCAATCGAGAATTCAACACCTGATCTTACGCTAGAGAAGTCCATGAATATGAAGAACCATtcaaacatgaacaaaaatattgagcGCAAAAACGTACAGACTGTAAAAGTTTGCGTAAATGAATACACGAAGAAACATTCTTCGGATAcgatacaaaatgaaaatcggaataaaaaattattatctaaTTTTATGCTGCATGATAACACGGATAAAAGAATTAAAGAACGAAATACAGACTTGATTGCAATGGCAATAAAAGGAGTCAAAAATGAGAGCAGCAGAAATTACTTCAGCGGAGAAAACtcaattgaaaatcatcataTCCGAACGGAAACTACAAATGCATTACTACCTCATAACACATTCGAAGACCTGCTTAGAAATAATACAGTTAATGTAGATCACGCAGTCGTTAGTAAATCGTCAGACAATCAAGAGCCAACAGAGAGTGGAGAGGAATTTTATGAACTGCtgattacaaattattcaGAAAAACCAGAAAATTCTTTTGAATTTGATAGAATCTCAACCATGACAAATgtggatgaaatttcgaagattGCAGAAAACAATGCTGCAACAGAATCATTATTAAAATTAGTTCAATTAGAAAATGGTCAACGTGTTTTGGAATTAAGGACAAATCGTCTGTctgatgaaaacgaagattgCATAAATGGGGAGAATATTCAGCAAACTGTTGCAAAAACTACCTTTGTTGAAACATCGTCCAATGAATTAGAAAATGTTGAGCAAGACGATAACAGAGTGAAAAGTTTGGCGCAAAGtaaatgtgaaaaaatctttTACTTGACACAAAATAACAAGGATAGTATCATAGATTTCTTCGAGATAGAAACTTCAGAGACCCAGGAACAACATAGCTTTAATTTGGTATCAGATGAAGTGATGGAAAATGTATCACAAACAAGCTTCGATCATTTACAAACATTGAATGGAAACAAAAGTTTGGTAAATGACGAATCCCCGATAGATAATGAGAGCTGTGAAGAACTTTTGGGACTGATACAAACCAATCCTATCAAACATAATGAGAAAAGtaaaatagaattgaaaaaatctagGAACGAAGAAGGGCCGATGGTTAGACTTGTACAGAACGAGGATGGAGCACAATTTTTTGAGCTAATTAGAGGGGATTTAGAATTCGAAGAAACTCAAGACTTTCAATTAGTTGAAACAAATGAATCGAAAGAAAGGCAGAACCCCCAAGTTTCACATGATGGCAAGACGACCATGAATTTCCAATTGGGATCTGCTCCTACGATTAATGATACGACTAAATTCGAAACTGATATAAACCGTAAAAGGAAGCaaaaaaatagtttgaaaactTACGACTGTGACGTTTGTAAAAAGTCATTTTCTAAAGGATATAACTACAGGCAACATATTGGTACTCATTTTGCCGATCAGCAGAAATTCAAGTGTGAGGAGTGCGGCACTCTTTTTGCTTGGAAATCTACCCTCAATAAACACATGGCGACACACAGAGCCGGTGGAcagcaaaaatttgtttgtgaAATCTGCCCTAAAGTATACACAACTTTGTCACAAGTAAATGAGCATGTGAAGAGGGATCATCTGAAAGAGCGTAATCATAAATGCCTTCACTGCGGAAagaagtttttcaaaaaatttgatctTAAGATACATATTCGTACGCATACTAAAGAGCGTCCTTACGAGTGTAGTGTTTGTTACAAAAGCTTCCATCATCAGAGTCACATCATCCGTCATGAAAGAATTCATTCAGGAGAGAGACCCTATGCTTGTAACATTTGTGAAAAGACATTCACGCAATTGGGATCACTTAAAAATCATAGACAGAGACATCAGGAATTAAAAATAGATATTTTAGATTATCAGATGGACGAAGATGACCCTTTACCTCAAACTACCTTGTAA
Protein Sequence: MISTSEKTFPEYKISFKKENYSIHPESNKSDDETVEQIGSDLCRKHVCSFCQSSFTNKNLFFDHLANHGIEIPQNYSVFISPKTDRDSELSSHKIENENSHTALVVRPFKCNLCCLVFDRISQYDKHRRSVHSKERSQVCHICGKGFFRQTDLKTHLNIHLGTNKCVCEICGRKFNHVSNLTRHSRTHTGVKPYPCTICGKRFTQINTLARHKVIHKRGNEILDCCFCDKRYKSESGLKEHMRKLHHFTGKSHREDHINGRIIKRQHYCKICGKSFQFVELLRVHEKSHQNVQTLECKSCHQKFQKTEEIKEHRCGRVKISNSNVMKTTKTFKNKIIRDDENRSNSYGENKSVLTQLVGMNETSLEQVGSNENHEATENRRINKPKNLMDHELGEKLCPETIISSNSNTLAEDKQTKETIVYITTKQLANMNAEQVVDTANHFLHQHLMELAAESSSQTDNISSRDCDGETVVSEMIKNCWKEIELPDVIESEISEKRDSLTSKNNTQSIIYIHALEKDSLIFLNEMGGNSIENSTPDLTLEKSMNMKNHSNMNKNIERKNVQTVKVCVNEYTKKHSSDTIQNENRNKKLLSNFMLHDNTDKRIKERNTDLIAMAIKGVKNESSRNYFSGENSIENHHIRTETTNALLPHNTFEDLLRNNTVNVDHAVVSKSSDNQEPTESGEEFYELLITNYSEKPENSFEFDRISTMTNVDEISKIAENNAATESLLKLVQLENGQRVLELRTNRLSDENEDCINGENIQQTVAKTTFVETSSNELENVEQDDNRVKSLAQSKCEKIFYLTQNNKDSIIDFFEIETSETQEQHSFNLVSDEVMENVSQTSFDHLQTLNGNKSLVNDESPIDNESCEELLGLIQTNPIKHNEKSKIELKKSRNEEGPMVRLVQNEDGAQFFELIRGDLEFEETQDFQLVETNESKERQNPQVSHDGKTTMNFQLGSAPTINDTTKFETDINRKRKQKNSLKTYDCDVCKKSFSKGYNYRQHIGTHFADQQKFKCEECGTLFAWKSTLNKHMATHRAGGQQKFVCEICPKVYTTLSQVNEHVKRDHLKERNHKCLHCGKKFFKKFDLKIHIRTHTKERPYECSVCYKSFHHQSHIIRHERIHSGERPYACNICEKTFTQLGSLKNHRQRHQELKIDILDYQMDEDDPLPQTTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -