Basic Information

Insect: Phymatocera aterrima
Gene Symbol: -
Assembly: GCA_963170745.1
Location: OY720663.1:15038839-15044553[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.24 25 6.0 2.8 2 23 295 317 294 317 0.96

2 21 0.048 5 8.2 1.8 1 23 417 439 417 439 0.98

3 21 0.00014 0.015 16.1 3.2 1 23 488 511 488 511 0.98

4 21 0.0056 0.59 11.1 1.2 1 19 560 578 560 580 0.96

5 21 0.015 1.5 9.8 3.4 2 23 622 644 621 644 0.94

6 21 0.0019 0.19 12.6 0.0 1 23 689 711 689 711 0.97

7 21 0.00069 0.072 14.0 0.1 1 23 717 739 717 739 0.97

8 21 2.1e-05 0.0022 18.7 0.2 2 23 782 804 782 804 0.95

9 21 4.8e-06 0.0005 20.8 2.8 2 23 812 834 811 834 0.97

10 21 5.3e-05 0.0056 17.5 0.2 2 23 843 865 842 865 0.94

11 21 0.00039 0.041 14.8 0.4 1 23 875 897 875 897 0.93

12 21 0.27 29 5.8 0.2 2 20 956 974 955 974 0.95

13 21 0.02 2.1 9.4 0.3 2 23 994 1015 993 1015 0.95

14 21 0.00021 0.022 15.6 1.5 1 23 1042 1064 1031 1064 0.98

15 21 0.00022 0.023 15.6 2.9 1 23 1086 1108 1086 1108 0.97

16 21 2.1 2.2e+02 3.0 1.5 1 19 1126 1144 1126 1147 0.86

17 21 0.41 43 5.3 1.9 2 23 1209 1231 1208 1232 0.90

18 21 0.0001 0.011 16.6 0.3 1 23 1268 1291 1268 1291 0.94

19 21 7.5e-05 0.0079 17.0 2.0 2 23 1298 1319 1298 1319 0.98

20 21 0.0009 0.094 13.6 0.7 1 23 1324 1347 1324 1347 0.97

21 21 0.02 2.1 9.4 2.9 1 23 1380 1403 1380 1403 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.24	25	6.0	2.8	2	23	295	317	294	317	0.96
2	21	0.048	5	8.2	1.8	1	23	417	439	417	439	0.98
3	21	0.00014	0.015	16.1	3.2	1	23	488	511	488	511	0.98
4	21	0.0056	0.59	11.1	1.2	1	19	560	578	560	580	0.96
5	21	0.015	1.5	9.8	3.4	2	23	622	644	621	644	0.94
6	21	0.0019	0.19	12.6	0.0	1	23	689	711	689	711	0.97
7	21	0.00069	0.072	14.0	0.1	1	23	717	739	717	739	0.97
8	21	2.1e-05	0.0022	18.7	0.2	2	23	782	804	782	804	0.95
9	21	4.8e-06	0.0005	20.8	2.8	2	23	812	834	811	834	0.97
10	21	5.3e-05	0.0056	17.5	0.2	2	23	843	865	842	865	0.94
11	21	0.00039	0.041	14.8	0.4	1	23	875	897	875	897	0.93
12	21	0.27	29	5.8	0.2	2	20	956	974	955	974	0.95
13	21	0.02	2.1	9.4	0.3	2	23	994	1015	993	1015	0.95
14	21	0.00021	0.022	15.6	1.5	1	23	1042	1064	1031	1064	0.98
15	21	0.00022	0.023	15.6	2.9	1	23	1086	1108	1086	1108	0.97
16	21	2.1	2.2e+02	3.0	1.5	1	19	1126	1144	1126	1147	0.86
17	21	0.41	43	5.3	1.9	2	23	1209	1231	1208	1232	0.90
18	21	0.0001	0.011	16.6	0.3	1	23	1268	1291	1268	1291	0.94
19	21	7.5e-05	0.0079	17.0	2.0	2	23	1298	1319	1298	1319	0.98
20	21	0.0009	0.094	13.6	0.7	1	23	1324	1347	1324	1347	0.97
21	21	0.02	2.1	9.4	2.9	1	23	1380	1403	1380	1403	0.94

Sequence Information

Coding Sequence: ATGGATGATGCGGTATCAACACCGAACGTTGATAGTGTCTGCAGGCTCTGTTTGTCACCCGATGAACCGAAGCTATCAATATTTGATGGGGATGATTCTTCCGTGCCGCCGCTATCTTCCAAGATACAAGCTTGCCTAGCTATTCAGGTTTCATCCGCTGATAAATTGTCCACTCTAATATGTCAAAGATGTGTGAAAAACGTGAACCAATGGCATAGTTACAGAGATTCTTGTCTCAAGGCTCAAGACAAGCTTCAGCAATGGCACATGCAGCAGATGTCAGCTCATACGGGCGTGACCATTAAGCAAGAACCGATTGATTTGGAATTTGATAATGACCAGAGCGAATCCATAACAGAATTGAATGATTCGAATCATGACGAACAAGATGAAGTGGGTATCATAACAGTCTGGGCTAGATATTTTAACATTAATTCTATTGATATCCATaATGACAGAGTTATGGCGCTGCAAATTACCAACGAGCAAACGATTCGTACTGATAAGGAGAACACGGAGAAGTCATCAAAACATGAAACTTCGGTTCTAACACGGATTAGAACTAGGAGTTTTGCTATACCGGTCTCTCCGCCGACCATCCCACAAGACTTGGAAAGGAACCAAACATCATCCAAACCGTATTGCACAGTGGAAGTAAAAGTTGAACCGATACAAGAGGATGAATATGATTCTACTTTAGAAATTGAGTCAGTTACAGGTGGCGAGATTCTGCCTAATCCTGTAGCTGTTAATTTACCGGAAAAAGACAGAGTCATGGAGGCTGATTCGACGCAGAGATCTAGTTCTACGACTTTTAAAATAAAGAGGAAAGTGAGAAGAGGACCTCACACGCATTTGAGACACAAAAGTATATTCAGAAAAAAGTGTGTCTATTGTCAGATAAATCTTCACTCAAAATATTCGTATGCTCGACACATGGAGAGGTTCCATTCTCCTGTTTCAGACTCCGAACCAAAGGATGACAAGACAGACTTGAAATacgttataaagaaaaaagaaaaaagtacaaattcTCAAGACCAGATTAGACCTATTAGAAATATTAAAACTCAGGATGTGAATGCGGAAAATGTTTACGGAGATAATAACGCGGCGACAAATAGCTATCGCAAAAATGTGGATGAGGAAATGATTGAGGATGTAGAAGATGAGATAGACAACATGGACAAGAATTCAGACACCCCTCTGTCTCAAGTACAACAAAATATAATTGGTCAATTGAAGACCTACTCTTGTTATTCTTGCAAACAGGTTTTCCCGGATCGTCGAACAACCCTAAATCACCTCAGACAACATTTACCAGATCTAAGACCATTCACATGCGTCGCTTGTCTCACGCAGTTTCCAGATCGTTCAATTTACAAGGATCATTGCTACACATCTTTTGAATGCGCCATGAAAATAGCTATTGTTGAGCCAAAATCAGGCTtagagaaatatttcacttGTAATATGTGCTCGAAGTCTGTCACCAATAGAAAAGAGTTATTGCATCATCTAAACACGCAGCATTCTGAAGATCAGCAAACAAATACAATACCAACATCGTCTAAAAAACCTGCGAAGATAGTTATTAACGAAGCTTCTTCACCCGCAGCTACTTCGAGTTGGTCCGACTTACCTGGGCCATACGAAAATGGTAATCCTGCATACAATCACTCCTGTAGTTACTGTGGAATGATTTATAAACATGAACGTAACTTGAGAGAACACGATCGACTTTGTAGCCGACTACCGGCTAGTGCAAGAACATCTTATGCTTGTATACATTGTCGGAAGACCTTCCTTGTGTTCAGAAAGTTTTCGAGCCATTTAATACAAATGCACAATACGACGGATATCACATGCGCTAAATGTCGCAAGTGTTTCAAAACTGCGCCTGACTACTTGGCTCATCATGAAAAGTATCATAAGAATAATAGCTCTCAACCTATTGTCAAAGACAATGGAAGGTCTTCGACGAGCTTTGAAAGTCCTTTGAAAGATTGGAATGATTTCGAAGCCGAGGTGCACGCTAATGAGTCAAGAATTAGCCGGCAAAAGTACAGCTGCGCTTTATGCGGTCAGGAATTTCCTACCAGAGGTGAACTTGGCGAACATAGAAATTTGCATTTGAAAGTTAAGATTTATTCCTGTGTCATATGTCGCAGTATGTTTAGCAGTGCCGGAGCCTTGGAGGTTCACATGAAAGATCACGGGATTGAAGATCCCGCAGAGCAAAGCGCTCATACATCTTGTATGGAGTACGAAGGAACCGAGGATACGAAAGATATTAGTTTGACACAGACTTTAGAAGATACTGATTCTGACCCTGGTCAAAGAACGTGCAACATTTGTAACAAGATTTTTGCGAGTTTACCAAATCTCAAGAGACACCTTGCAAGTGTCCATAAGAATAGTAAAACTCGTCAGAAATGCACGGAGtgcaacaaatttttcagtaAGAAGAATTCCCTGGAATATCACATGAGAACCGAGCATAAAAGGACACTAAATTCGCCCATTAAATGCCCTGTTTGTAACCAGACTTTCGCCAATCGAGCCAATTACAATGTACATTACAAAGCTATGCACTCTGAGGCGGTAAAAGTGGAGGCACTGCACGAGTGTGATATCTGTGGTAAAGAATTCAAGGAAGAAATGTCCTTGAAAATTCACAGAGGATGGCATGCTCGAAGGGCACGTAGACTGACTGAAGATATATCTGTAATGAATCGCAATCGAGCTTTGTTGGCTCCAAAATCGCGAGATAATTTTGATGAGTTTCAAATTCCAACGGAAAAACCTGCAAGAGCTAGAAAATCATTTCCAAATTCAGCACCGGCGAAACCTGTGCCACAATTACAGTGCCAGGTTTGTGACGACAAGTTCACCGAAGTTACCGAACTGAGGAAACACCTTTGGGATATTCACTGCGCCCGTAATAAAAGCGAGAAGAATTTCACTACAAATGATCTGCAGTGCGAATTATGTACTCATACTCTACCGGACAGACCAAGCTTGGAAAGACACTTGGAATGGCATATGGAAAATCCAATTTTGAGTGATTCGAAGAATGGGGTAAAGAGGAAGAGGTATTACACACCTAGGGAGCTGAGGACTCATCCCTGTGAAATTTGTGGTAATTTTTATACCTCGAGAAGGAGTTTATTGAGGCATCAGAAACTCCATGGAGCCGCCGGTAGTGCGGCAATTAAATTTCAATCCATAGCTCAAAAGCCGCTGGCCACACAGTTCCCTTGCAATGTTTGCCACAAGATATTCGATACCTCAATGAAACTGCGCAAACATAGGGTCCGCCATTTTGTAAACCCTGCAGATCGGAAGCGACACTCTGTTCTTGAGAAATCGGACTACAAgtgtgaattttgtttcaaatattACAGTTCTGAAGTCGGACTGCGTTTTCATCGTGAAAAGATTTGTCCCTACCGTGCTCAAGACTTGGCAGGCGTTCCTCGGAATAAACGTCGCAGAATAGCCTCCGTCGGTGAAAGCGGAAGTTCAGGTGATATCGATCTGCCAAAACCGATACCCGCATTAACTTCAATCAATACACAAAACTTCAATCACCCTGTTGATTGGCGGGACAAAAAATTGGTGACTTGTAGCATATGCCAAAAGTCTTTCCTCGGGAAGATTTTGTTCTATAAACACAGAAAAGCGATGCATCACAAGGAGATATTCGGGCGTAAGTTAGGTGGAGATAAAAAACCTATCACTAACACTATACAAGCTGAGGGTGCGGCTGCTGCTACTGCGTCAATGAACTGTAATAATTTTAGTTGCCATCTATGTGGCAAGGAATTCCCAGCTGCAATGAATCTGAAAATGCATATGTCGGCTGTCCACAAACCCGTCAATCCAAATACTTGCAATATATGTCATATGACATTCACGACTAACGTAGGCATGAGGAATCACATGCAGGTACATTCTACCGATAGATTTAGGTGCAATCTTTGCCAACGAATATTCCGCACCAGACCAGCTGTCTTTATTCATATAAACAGACAACATCCTGACGAATATGATATCATGCAAGATAATAAATCTGAATTGTTCACCGAACTTCTCACTAAACCTAATGCCCCAGAAGCGAATCGACCGATGTCTTTCCACTGTGGGTATTGTGAGATGACTTTTGACTCTCATAAGGGTCTAAGAGTTCATGCTATTAAGCGTCATTCCGTGCAACACtag
Protein Sequence: MDDAVSTPNVDSVCRLCLSPDEPKLSIFDGDDSSVPPLSSKIQACLAIQVSSADKLSTLICQRCVKNVNQWHSYRDSCLKAQDKLQQWHMQQMSAHTGVTIKQEPIDLEFDNDQSESITELNDSNHDEQDEVGIITVWARYFNINSIDIHNDRVMALQITNEQTIRTDKENTEKSSKHETSVLTRIRTRSFAIPVSPPTIPQDLERNQTSSKPYCTVEVKVEPIQEDEYDSTLEIESVTGGEILPNPVAVNLPEKDRVMEADSTQRSSSTTFKIKRKVRRGPHTHLRHKSIFRKKCVYCQINLHSKYSYARHMERFHSPVSDSEPKDDKTDLKYVIKKKEKSTNSQDQIRPIRNIKTQDVNAENVYGDNNAATNSYRKNVDEEMIEDVEDEIDNMDKNSDTPLSQVQQNIIGQLKTYSCYSCKQVFPDRRTTLNHLRQHLPDLRPFTCVACLTQFPDRSIYKDHCYTSFECAMKIAIVEPKSGLEKYFTCNMCSKSVTNRKELLHHLNTQHSEDQQTNTIPTSSKKPAKIVINEASSPAATSSWSDLPGPYENGNPAYNHSCSYCGMIYKHERNLREHDRLCSRLPASARTSYACIHCRKTFLVFRKFSSHLIQMHNTTDITCAKCRKCFKTAPDYLAHHEKYHKNNSSQPIVKDNGRSSTSFESPLKDWNDFEAEVHANESRISRQKYSCALCGQEFPTRGELGEHRNLHLKVKIYSCVICRSMFSSAGALEVHMKDHGIEDPAEQSAHTSCMEYEGTEDTKDISLTQTLEDTDSDPGQRTCNICNKIFASLPNLKRHLASVHKNSKTRQKCTECNKFFSKKNSLEYHMRTEHKRTLNSPIKCPVCNQTFANRANYNVHYKAMHSEAVKVEALHECDICGKEFKEEMSLKIHRGWHARRARRLTEDISVMNRNRALLAPKSRDNFDEFQIPTEKPARARKSFPNSAPAKPVPQLQCQVCDDKFTEVTELRKHLWDIHCARNKSEKNFTTNDLQCELCTHTLPDRPSLERHLEWHMENPILSDSKNGVKRKRYYTPRELRTHPCEICGNFYTSRRSLLRHQKLHGAAGSAAIKFQSIAQKPLATQFPCNVCHKIFDTSMKLRKHRVRHFVNPADRKRHSVLEKSDYKCEFCFKYYSSEVGLRFHREKICPYRAQDLAGVPRNKRRRIASVGESGSSGDIDLPKPIPALTSINTQNFNHPVDWRDKKLVTCSICQKSFLGKILFYKHRKAMHHKEIFGRKLGGDKKPITNTIQAEGAAAATASMNCNNFSCHLCGKEFPAAMNLKMHMSAVHKPVNPNTCNICHMTFTTNVGMRNHMQVHSTDRFRCNLCQRIFRTRPAVFIHINRQHPDEYDIMQDNKSELFTELLTKPNAPEANRPMSFHCGYCEMTFDSHKGLRVHAIKRHSVQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -