Basic Information

Insect: Phymatocera aterrima
Gene Symbol: -
Assembly: GCA_963170745.1
Location: OY720663.1:8822211-8827936[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0011 0.11 13.4 2.6 1 21 97 117 97 118 0.95

2 28 0.64 67 4.6 3.4 1 19 176 194 176 199 0.93

3 28 8.8e-05 0.0092 16.8 1.4 1 23 232 254 232 254 0.98

4 28 4e-05 0.0042 17.9 1.6 1 23 260 283 260 283 0.97

5 28 1.5e-05 0.0016 19.2 0.3 1 23 289 311 289 311 0.98

6 28 6.5e-07 6.8e-05 23.5 2.0 1 23 317 339 317 339 0.98

7 28 5e-05 0.0053 17.6 0.7 1 23 345 367 345 367 0.98

8 28 0.00036 0.038 14.9 4.0 1 23 373 395 373 395 0.96

9 28 0.00023 0.024 15.5 0.9 3 23 403 424 402 424 0.96

10 28 0.0054 0.57 11.2 0.0 3 23 457 478 456 478 0.97

11 28 4.3 4.5e+02 2.0 0.8 1 11 483 493 483 506 0.83

12 28 0.00055 0.058 14.3 1.1 3 23 523 543 522 543 0.98

13 28 0.017 1.8 9.6 0.5 1 23 681 703 681 703 0.97

14 28 0.18 19 6.4 0.0 1 23 709 732 709 732 0.93

15 28 0.0055 0.57 11.2 0.1 2 23 735 757 734 757 0.88

16 28 6.1e-07 6.3e-05 23.6 1.0 2 23 764 785 763 785 0.97

17 28 7.1e-05 0.0075 17.1 1.5 1 23 791 814 791 814 0.97

18 28 5.6e-06 0.00058 20.6 0.9 1 23 820 842 820 842 0.98

19 28 7.1e-05 0.0075 17.1 0.7 1 23 848 870 848 870 0.96

20 28 6.3e-08 6.6e-06 26.7 0.8 1 23 876 898 876 898 0.98

21 28 0.00016 0.016 16.0 0.5 3 23 906 926 904 926 0.95

22 28 4.1e-05 0.0043 17.8 1.5 1 23 1099 1121 1099 1121 0.98

23 28 0.00087 0.091 13.7 3.7 1 23 1127 1150 1127 1150 0.96

24 28 0.00017 0.017 15.9 0.4 1 23 1156 1178 1156 1178 0.97

25 28 0.00014 0.015 16.1 3.5 1 23 1184 1206 1184 1206 0.97

26 28 0.037 3.9 8.5 1.2 1 23 1212 1234 1212 1234 0.86

27 28 8.7e-06 0.00091 20.0 1.2 1 23 1240 1262 1240 1262 0.97

28 28 4.4e-05 0.0046 17.8 2.0 1 23 1268 1291 1268 1291 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0011	0.11	13.4	2.6	1	21	97	117	97	118	0.95
2	28	0.64	67	4.6	3.4	1	19	176	194	176	199	0.93
3	28	8.8e-05	0.0092	16.8	1.4	1	23	232	254	232	254	0.98
4	28	4e-05	0.0042	17.9	1.6	1	23	260	283	260	283	0.97
5	28	1.5e-05	0.0016	19.2	0.3	1	23	289	311	289	311	0.98
6	28	6.5e-07	6.8e-05	23.5	2.0	1	23	317	339	317	339	0.98
7	28	5e-05	0.0053	17.6	0.7	1	23	345	367	345	367	0.98
8	28	0.00036	0.038	14.9	4.0	1	23	373	395	373	395	0.96
9	28	0.00023	0.024	15.5	0.9	3	23	403	424	402	424	0.96
10	28	0.0054	0.57	11.2	0.0	3	23	457	478	456	478	0.97
11	28	4.3	4.5e+02	2.0	0.8	1	11	483	493	483	506	0.83
12	28	0.00055	0.058	14.3	1.1	3	23	523	543	522	543	0.98
13	28	0.017	1.8	9.6	0.5	1	23	681	703	681	703	0.97
14	28	0.18	19	6.4	0.0	1	23	709	732	709	732	0.93
15	28	0.0055	0.57	11.2	0.1	2	23	735	757	734	757	0.88
16	28	6.1e-07	6.3e-05	23.6	1.0	2	23	764	785	763	785	0.97
17	28	7.1e-05	0.0075	17.1	1.5	1	23	791	814	791	814	0.97
18	28	5.6e-06	0.00058	20.6	0.9	1	23	820	842	820	842	0.98
19	28	7.1e-05	0.0075	17.1	0.7	1	23	848	870	848	870	0.96
20	28	6.3e-08	6.6e-06	26.7	0.8	1	23	876	898	876	898	0.98
21	28	0.00016	0.016	16.0	0.5	3	23	906	926	904	926	0.95
22	28	4.1e-05	0.0043	17.8	1.5	1	23	1099	1121	1099	1121	0.98
23	28	0.00087	0.091	13.7	3.7	1	23	1127	1150	1127	1150	0.96
24	28	0.00017	0.017	15.9	0.4	1	23	1156	1178	1156	1178	0.97
25	28	0.00014	0.015	16.1	3.5	1	23	1184	1206	1184	1206	0.97
26	28	0.037	3.9	8.5	1.2	1	23	1212	1234	1212	1234	0.86
27	28	8.7e-06	0.00091	20.0	1.2	1	23	1240	1262	1240	1262	0.97
28	28	4.4e-05	0.0046	17.8	2.0	1	23	1268	1291	1268	1291	0.97

Sequence Information

Coding Sequence: ATGCAACATCAAAAGGAAAGTTTCTCAAACATCTTGCACTTATTATGCTTCCAGTCAAATTATAACGGTGCGGAATATCTAAAACCCCGAAGGGTTGTTCTGCCCTTAGAATTATCAGAACAGAGTGACAAGTTAATGAATAAAACTAGAACCTCTGATAATAATAGGGATGAGGTTTCGAAACAGGAATTTGACGCCACTGGCTCACACAGAAGAAACCCAATTCGGTCTTTCCGAAAGCTTTCAACCGAATTGACTGAACTCCAATCAGACAATACTAAAACGTCGTACTCCTGCCTGAAATgtgaacgaattttcaaaagagAATTCCATTTCAATCGTCACATTATGAAATGTGGGGAAAAAGGTGCCGTCGCTTCAGATatagttgaagaaaaattagcaATAGGAGCGGTGAAGTTTGCTGAAAAAATAGACAAAGATACCAACGAAGAGGTGAAATCAACTGAATCTGAAAACGATTGGAATTTAGATAAGAAGGAGGGAAGAAATAAGCTCAAGTCTTATCCTTGCATGCACTGCAATTATTCAGCAAGTAAAAAGAAATTACTCAACTCCCATTGTTTAGAACTTCATCGAGAAGTTTTACGGAAGAAGCAAATAAAACAGTCAAGAAATACAGACAATGAAACAATAAAACGAGCTCGTGTCGAAGTTGATGGCAAAGTTTACTATCACTGTAACGATTGTGGAAAGAATCTCTATTCCCCGTACACTTTTTCATGGCACATTCGCATTCATACAGGAGAGAAACCTTACACTTGTCATTTGTGCGGCCGCCAATTCCGAGTGAACCAAGGCTTAGTGAGACATCTGCGGGAAACTCATGCAGGAATTAAAGAATTCCCATGTGATATATGCGGGAGACTGTTTTCCACGAAACGGAATGTCGAGGACCATCGACGTATTCATACCGGAGAAAGACCGTTTGTATGTAAAACGTGCGGCAAATCATTTAAACAAAAGGCATCACTGTTTGTTCACAACCGCACTCACACAGACTCGTTCCCATTCAAATGCAATTATTGTAATCAAGCTTTTCGTACCAGACCTCCGCTCATGGTTCACATCACTAAACATACTGGTGAAAAACCCCATGCCTGTGATATATGTAATCGTCATTTCCGCATTAAGTATGAACTAAAACGCCATCGGCTTGTCCATTTTGAGGAAAAACCTTGGCTCTGCACTGACTGTGGACTTTCCTTTAGACAGAAACGTTATTTAGTTAATCACAATAAAATTAATCACAGTGCAAATCGTAATGAGTGTACCGTGAGCTTGTTACAAATACCTAAAGCAGAAATTGGAGATTCTTCTTCTGAAGAAAGACTAGAATACGTTGATTGTGAAGAATGCAAAGCAACGTTCATAGAGTTTGCAGATCTTGCTGCGCACATGAATTCCGAGCACAACGATGCCGTTCATTATTGTTCTCAGTGTCAAACTGTCTTTCGTGGAGATATAAGAGACTTCAAGCTGCACGAAAGAAACCATGTCACCGATAATAACACGACGAAAAAAACTTCGAAAAATAACGTCCTTTGTTCTTTATGCAACAAAATATTTAACTCTCTTGCAAAACTCAAACAACATTTGCTCAAGCACGTCGACGACAAACGACTTCTGAATAAAGCCAAACCTCCAAAATCGTGTTTGCTGGGGGAAGAGGAAATTTCGGCATCACTTCTCGAAACTATCGACCAAAATGTTGATGATGAAGAACAATTTACGTATGGGGATACCATAGACGTTACAGTAATGTATTCTAAAGAGCAAGATGGTAAACAATGCGCAGAAGAATCATTTGTTCTAATGATACCGCAGAACAAACCAGACGATCCCAATGCACACGCGTACGGATGTCGTACTTGCAACATCCACAATTTGATGTTCAATGAATTCACCGCGCATGTCAGTAGCCATTCATCGGACAATGGCGAGTGCAGCGAAGAATATGAAAGCCAAGAGGCGCTGCATGCTGCAGTTGCCAGATCTCTTCAATCCACCATAAACAATTTTAAGTGCGAAATTTGTGAGAGCAAATGTGATTCACAGGCAGCATTGTTACAGCATCTTGAACTCCATACGGAAGCAGGAGCTCACATATGTGATTTCTGCGGGGCCAGTTTCGCTGCGATAGCAAGTCTTGACGCTCACGTTTCTCGTGAACACCGTATTCCTTGTCCAGATTGTGACCTCAAATTCGATACAGAAGAGTTACAGATGCATCATATCAAAGAAGCTCACAAGGAGAAGATAGTTATCTCTTGTGAAATATGTGAAAAGGTGTTCGCCAATAAATCTAGCCTACGACATCATATGATTAGGCACAGTAACGATCAGCCGTATATTTGTAAAACTTGTAATCGGGCATTCAAACGCACATCTAGTTTATACATGCACGAAAGATCGGTTCATCAAAAAATTAAAGCATTTTCCTGCGTTATTTGCAATAAGAATTTCGCATTGAAGACACAACTGCAGACCCACATGCGGGTACATACAGGAGAAAGACCGTATGCCTGTGACATATGCACCCAAACGTTCAAGACTACCAGCCAGCTACAATTACATAAAGACGTTCACTTCGACAATAGGCCCTTTCCTTGTGAATATTGtggcaaaaaatttcgaagaagACCCAACTTAATACTGCATCTACGAACTCATACAGGGGAAAAACCCCATTTGTGTGATTTGTGCGGTCGTGGATTCGCGCAACGTGGTGATATGAGGAAACATATAGTGACACATTATAAGCTCAAAACACCTTCTACTTCTCGTGGATACTGTCACTCCAGCGTATCATTGAAGAGTTATATTCATTGCCCTCGATCTTCGTCCCTCGTTGATTTTCGGAGGGCTTACCAAGCCTTACTACAGTCCTATCAAAGGCAAGTGAAACTTCCTCATCAATCGACTTCAAGGAACACTAAAAGTAACGAGTGGTTAGATATTGTTTCATTGGATGACGGCATGAACAACAGTAGTCACGTAGATATAAATACCAAAACGAAATCAACAGAAGAACATTCAATCTCAACCAGTGTTCTCCAAAGTAATGTGACTAACGTTTCGAACGATGAAAATCAATCGCTAGAACTTGTCAATAGTTCGGTGATAGCTGAAGCGTTCAGTCCGCGAATTTGCGACAAGCATGCGAGTATGGTTGCTGCGAGTTCGTCACCAGAGAAAAGTGTTGAAGAACGAAGCTATAAAGCAGATGATCAGTCTATTGGAGAACTTTCGTCAGTTCCAGTGAAAACTTCATATGATTGTAAACTATGTAGTAAAAAATTCCGGTTGCAGGATAGTTATCGCGCTCACATGAATATCCATACCGATGCGAAACGTTTCACATGTCATATTTGCGGAAAGCAGTTTGGACAGACCGGAAGCTTATACTATCATTTGAAACACGTTCACGGTGGAGTTAAACAACATTCTTGTGATCTTTGTGGGAGAAGTTTTGCGATGAAAGCAGCTATGGAAGATCATAGGCGAATTCATACTGGAGAACGGCCATATTGTTGCGCGTCTTGTGGTAAAACTTTCAAGACCAAAGCTTCATTGTATATTCATAGTAAAACACACACTGACGAGCTCCCTCACAAATGTTCTTATTGTCCAAAAGCATTTCGGTGGAGGCAACAAATGTTAGGACATTTGACTATTCACACCGgacaaaaaaatcacatttgtGAAATATGCGGAAAACGCTTCGGGGTTAAAAACGATCTCACAAGACATAAACGAATTCATTCCGAAGAAAAACCATTCATGTGTCAACAGTGTGGTCTCAGCTTTGGTCAGAAAcggtatttgaaaaatcacgaACGCACTAGACACGGATAA
Protein Sequence: MQHQKESFSNILHLLCFQSNYNGAEYLKPRRVVLPLELSEQSDKLMNKTRTSDNNRDEVSKQEFDATGSHRRNPIRSFRKLSTELTELQSDNTKTSYSCLKCERIFKREFHFNRHIMKCGEKGAVASDIVEEKLAIGAVKFAEKIDKDTNEEVKSTESENDWNLDKKEGRNKLKSYPCMHCNYSASKKKLLNSHCLELHREVLRKKQIKQSRNTDNETIKRARVEVDGKVYYHCNDCGKNLYSPYTFSWHIRIHTGEKPYTCHLCGRQFRVNQGLVRHLRETHAGIKEFPCDICGRLFSTKRNVEDHRRIHTGERPFVCKTCGKSFKQKASLFVHNRTHTDSFPFKCNYCNQAFRTRPPLMVHITKHTGEKPHACDICNRHFRIKYELKRHRLVHFEEKPWLCTDCGLSFRQKRYLVNHNKINHSANRNECTVSLLQIPKAEIGDSSSEERLEYVDCEECKATFIEFADLAAHMNSEHNDAVHYCSQCQTVFRGDIRDFKLHERNHVTDNNTTKKTSKNNVLCSLCNKIFNSLAKLKQHLLKHVDDKRLLNKAKPPKSCLLGEEEISASLLETIDQNVDDEEQFTYGDTIDVTVMYSKEQDGKQCAEESFVLMIPQNKPDDPNAHAYGCRTCNIHNLMFNEFTAHVSSHSSDNGECSEEYESQEALHAAVARSLQSTINNFKCEICESKCDSQAALLQHLELHTEAGAHICDFCGASFAAIASLDAHVSREHRIPCPDCDLKFDTEELQMHHIKEAHKEKIVISCEICEKVFANKSSLRHHMIRHSNDQPYICKTCNRAFKRTSSLYMHERSVHQKIKAFSCVICNKNFALKTQLQTHMRVHTGERPYACDICTQTFKTTSQLQLHKDVHFDNRPFPCEYCGKKFRRRPNLILHLRTHTGEKPHLCDLCGRGFAQRGDMRKHIVTHYKLKTPSTSRGYCHSSVSLKSYIHCPRSSSLVDFRRAYQALLQSYQRQVKLPHQSTSRNTKSNEWLDIVSLDDGMNNSSHVDINTKTKSTEEHSISTSVLQSNVTNVSNDENQSLELVNSSVIAEAFSPRICDKHASMVAASSSPEKSVEERSYKADDQSIGELSSVPVKTSYDCKLCSKKFRLQDSYRAHMNIHTDAKRFTCHICGKQFGQTGSLYYHLKHVHGGVKQHSCDLCGRSFAMKAAMEDHRRIHTGERPYCCASCGKTFKTKASLYIHSKTHTDELPHKCSYCPKAFRWRQQMLGHLTIHTGQKNHICEICGKRFGVKNDLTRHKRIHSEEKPFMCQQCGLSFGQKRYLKNHERTRHG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -