Pate011517.1
Basic Information
- Insect
- Phymatocera aterrima
- Gene Symbol
- snpc-4
- Assembly
- GCA_963170745.1
- Location
- OY720662.1:12059949-12062813[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.039 55 4.4 0.0 12 43 269 305 263 308 0.81 2 5 6e-09 8.5e-06 26.2 0.2 1 45 314 360 314 361 0.96 3 5 5.5e-10 7.8e-07 29.5 0.2 3 44 371 416 370 418 0.96 4 5 1.8e-11 2.5e-08 34.3 0.0 1 45 424 469 424 470 0.94 5 5 5.7e-13 8.1e-10 39.1 0.2 1 41 474 514 474 515 0.97
Sequence Information
- Coding Sequence
- ATGAGCGATTCAGAAGACGAAGATGTTATTCTTGATGATATAAAAGCACTGCAGGAAGTTTTAAGCCAAGCAAAAACAAACGAAGTTGAAAAACAGGTAAAATCAGAGTTTCACGGAATTTCTGTTGAACCCAACTTATGCGAACCATCAACATCGAAAACCGCCGATATTTATCCATCGACATCAAATGCGACAGAAGATTTAACATCTGTGGATCTGCTATTGGACAATGGAGAAGGTGGAAACGAACGTAACTCTCGGAAttctgaagaagaagaagaagaagaagaagacgaagatgaagaagaggaCGATAATTTAAACAATTTATCAGACTCTGAGGCTGCGTTAAttttgaatcaaaaaatcgttAGCCTCTTATCAACGGCCAAAAAGCGGTTACAACTTCTTCTCAGAGAATGTAAAAGGCGACAAACTGttatagaacaaaaaatacgtgAAAGAGGAACAGACCCATTAGGTCGAACGCTTCTGACAATTGTTGGAATGCCTTATTTTAAAGATAAGCAGCAATTCCCGGCACCTCAGAATCAGGATGCTAAAATAAAGGCGAGTCGTGGAGAATTGCAGTTGATAGACTTGCCTTGTCCGCTCCGATGGACTTTGAAAGATAGGAACACATTGTGGGAAGCAATTTACTGCAACGCTAAAGCCGATTTGAAATTAAGAACAAGGAACAGAGACTCAAAGGATCATGAAACCTTTGTGAATGAGCCAGAGGATCCTCTTAGACTAGACCATAAATCCGGAAGCAGAAAAATACCTGAGGAAATGCTTAGGAACATAAAAGAACTTGTTGGTCCATTAGGAACAAGGGAGTttgattggatgaaaatagCGGCAACTGATTTCAATGGAAGACATTCAGCTAACGAGTGTAGGGCGATGTGGAACGTATTTTTACACCCTGATATAAACAAAGGAAAATGGAATAAGCATGAAGATTTCAATCTGAAATTATTCGCTGAAGAATATAACTTCCAGAATTGGGACGCCATTGCTTTGAAATTAGAAACAAACCGCAGCGGATATCAATGCTTTATTAGATTCAATACAAATTTTAAAAACAATATGTTCAACAGAATAAGTTCATGGTCGAAAGAAGAGGACCAGAAACTTACAGATACTGTAAACGCATTAAGAACTGGGAATTTTATTCCGTGGGGCGAAGTAGCTAAATTAATGGGAAATAGAAGGAAACAGCAAATTTATATGCGATGGAACTACAGTCTTGCACCTAATCTAAAAAAAGGTCGTTTCACAGAGGAAGAGGACAAGCTTCTTCTCCAAGGCGTCGCCAAATTTGGATCTAACTTTACCAAAATTTCTATTGCTCTAATGCCGCATAGAAATACTGCACAATTGAATGACCATTACAGAACCTtgatgaacgagaaaaagaacgattgGACTTGCGAGGATGATATGAAATTAGTGAAACTCTTTGATAAGTTCGGAAACAGTTGGTCGTCTATTGctaaagaattttcaaacaagtCTCGCGTACAAGTTAGGCATCGTCATACTGCGATTATCAGATATCTTAGCAGAGGTCTCTCTATAAGAACTATACCTAGATGgggacaaaaaaaagaagagattcATAATACTCCCGAGGAAATATTAACTAAAGGAGAACAAATGCTTAATGAGATGAGCGAGATGATGAAGATACAGCAGAGGCAAAAAGAGgcagagaaaagagagagaatacCTAAAGTCGATTTGGAGCTTAGAGATTACTTCAAAGCGATTTATCGATCTCATTCTAAGCCTGGAAGAAACAGAAAGTTTTATACTCCTGATGAGCTAGACGAAAGGAGTCGGAAGCTTAACATCGTTTTGAATATGTTGAACGCCGATCTCGTAATTCCTGATGATTTAGAAGAGGAAGTATTCCTAACAGAAAAGGACAAGCAGCTATTATCTGCCTTGAAAGCATGCCCAAGAATTGAAAACCTAGAATCAGAGGCACAACATAAATACATTGAATACATTAGACGAAAGATGTTCGGGTCGTCTATGCCATCGATTGACGAAAAACGTTTTATACCACCCTTACCATTTAATGGAAAAGTACAAAGATGTAAAAGAAGGAAGCTTGTCGGTATTAACTATGTTCCTGACGGAGATAAATGTCTCGTTGAAATAACTCGAGAATTAGATACACCAGAGACAATTATATCTTTGATCGGCGGCTGGGATAGTGAaatagaatttaaaaaattagaaaggATATTGACTGGTGAAagcgaaaaattgagaaaaaatgtatctcTGATTAATGCtaagaatgaaaatagttTGATAAATAGTTTCGATTTCTATGCACCGAGTACTTCCTCTGGTAACATCACTCACAAGAGTGAAAATATGAGGCAGAAAATTGTAGCTAATACATCTTCCAAAATAATTGATGtaaagaattcaaaatataatCCAACGATGCTTATACCACCGAACTATGTTACGTTGTTAGGTTTTCGTGGTATATTATTATCCAAACATATTCTGCAAGCGGATGATTTTGAGGAAAATGAACACGATGAAGCAGAAACAGGAGACTGTACCATAACACCAAAGGGTCTGAAAGCTTTGGAGTTATTTGAGGAACGTTTAatcaaacttttcaaatttcctatAGAATTATCAGAAATACCACCGCCTTTGTTACATGGCTTGAGAAACGGGGAATTCGACAATATCGATGAAGTTGATGTGGAGGATGATAATGGcacaaaaaagaagagaaaggcAAACAATAAAACAAGCTCGGGATTGGCAGctaaaaaaaaacctaaagatgaaaaagttgATGTTACTAAAACTCCAGATCCTCCTTGA
- Protein Sequence
- MSDSEDEDVILDDIKALQEVLSQAKTNEVEKQVKSEFHGISVEPNLCEPSTSKTADIYPSTSNATEDLTSVDLLLDNGEGGNERNSRNSEEEEEEEEDEDEEEDDNLNNLSDSEAALILNQKIVSLLSTAKKRLQLLLRECKRRQTVIEQKIRERGTDPLGRTLLTIVGMPYFKDKQQFPAPQNQDAKIKASRGELQLIDLPCPLRWTLKDRNTLWEAIYCNAKADLKLRTRNRDSKDHETFVNEPEDPLRLDHKSGSRKIPEEMLRNIKELVGPLGTREFDWMKIAATDFNGRHSANECRAMWNVFLHPDINKGKWNKHEDFNLKLFAEEYNFQNWDAIALKLETNRSGYQCFIRFNTNFKNNMFNRISSWSKEEDQKLTDTVNALRTGNFIPWGEVAKLMGNRRKQQIYMRWNYSLAPNLKKGRFTEEEDKLLLQGVAKFGSNFTKISIALMPHRNTAQLNDHYRTLMNEKKNDWTCEDDMKLVKLFDKFGNSWSSIAKEFSNKSRVQVRHRHTAIIRYLSRGLSIRTIPRWGQKKEEIHNTPEEILTKGEQMLNEMSEMMKIQQRQKEAEKRERIPKVDLELRDYFKAIYRSHSKPGRNRKFYTPDELDERSRKLNIVLNMLNADLVIPDDLEEEVFLTEKDKQLLSALKACPRIENLESEAQHKYIEYIRRKMFGSSMPSIDEKRFIPPLPFNGKVQRCKRRKLVGINYVPDGDKCLVEITRELDTPETIISLIGGWDSEIEFKKLERILTGESEKLRKNVSLINAKNENSLINSFDFYAPSTSSGNITHKSENMRQKIVANTSSKIIDVKNSKYNPTMLIPPNYVTLLGFRGILLSKHILQADDFEENEHDEAETGDCTITPKGLKALELFEERLIKLFKFPIELSEIPPPLLHGLRNGEFDNIDEVDVEDDNGTKKKRKANNKTSSGLAAKKKPKDEKVDVTKTPDPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -