Pate008588.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phymatocera aterrima
Gene Symbol
ARID5B
Assembly
GCA_963170745.1
Location
OY720660.1:19508961-19520141[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5e-25 3.3e-21 75.9 0.0 2 89 248 333 247 333 0.95
2 2 7 2.4e+04 -5.7 3.4 7 7 803 803 770 829 0.54

Sequence Information

Coding Sequence
ATGAGATCACGGGAGACTGCGGTAAATCAGGTTATTTCAAGTCCTACCCAGGACGAGGTGTTAACAATATCGGAAAAGGTTGTTGTCCGTGTGAACGATTTGGTGACGTGGTTGTCCCCATCTTTGGAATGGTCGTGGGGTCGAGAGGTGTTTCCTCAGCCCGTGACTGGAACGAGTACATCATCGTCGCCAGACAATAGTCCCCGAAAAGAAGACACCCCAATTCCCCAAGTGTTGACGGATCCTGGTATAGACTTTTCTGATGTTGAAAAACAGCAGAAGGAATATGAGAGCAGTTTCAATACGGCCAATAAAAAAAGCGACGGTACCGATCCGCCGTCACAAACACGAGTCGTTGTTCTTTCGTATCCAAGGTACTGCCGATATCGAGCTCTTTTACGCCGATTAGAAGGTGCAGAACCCTCTTGGCTCTGTAGTCCAGTCGCTGCGGCCCTCGGTGGATTCACTGCTCTACCTGGTACGAGGGTTCTCTTCTGCAGGGATACATTCGACTACCCTGATCTCGAAACGCATGAACTACTGTGCAATCATTTAGCTCCGAAATTAAAGGGAAGACCtagaagaaaacggaaaaaacgtAGCACGTCACCTGGAGAATCTAGTAACGAAAGCGAGGCCTCAGTTGCATCAACTTCGAAGACAGTTTCCGCTAGTATAGTACCAGGACTGAGACCACCGTCGTCGGGTGTTCGCCGTAGCGAGAGAAAGACGAGTGCCGAGGAGAAGAGGTTCATCTCGGACGTTCAAACTTTCATGAACTCACGGGGAACGCCGCTTGGAAAAATGCCGTTATTAGGATACAAACaaaTTGATCTATTCCTATTTTACACGAAAGTTCAAAATATGGGCGGCTATGAATCTGTGAGTGCCAACAGATTGTGGAAATCCATTTATGACGAAATTGGTGGGAATACGGGATCGACTAGCGCCGCAACTATAACGAGGAGGCATTACGAGAGGTTGCTCCTACCATTTGAAAGACATCAACGTGGCGAGGAGATAAAAATACGTCCTGCTCATGGTAGGCGTTCAAAAACCAGCAGTATGTCGGAAgatattgaaataaaacaagaatCAGATGTTCCGAGTCCGTCACAAACACCACCAGCTTCAGCCACCTCAAATATTCCAACTTCAACGACTGTCACTCCACCTTTGCAGTCGATACTTTCGACGCCGTCGCTCCCTGGAGATAAGCCAAAATCAGAAGCAGGAAAGATCTCGTCTTTGCGTAGCGTGCGAGTAAAACCAGAGCGTCTTAAATCATTGAATACGATAATAGCAAGTACACCGACGACTTGTACCCAATCGATTCAACTACCAAGTCCACCGCCATCGTCTAATACACTGGTAACAACGCCAACCAGTACACCATCGACGACACCAAACGATGGTCAGAGTGTTCTAGAAAGACAATTGAACAGTCCGCTTCTAATGTCGCATCAATTACCACCGTCGTCGACACCTCCAAGTATaccaataaatacaaatactACTACGACAAATACAAATACGATTGTGAATGCGAATTCAAATACGAATGCGAATGCGAATGTGAATGTGACGGCCGTTGTAACACTGACACCACCCCCTGAAAAGGATATGAGAGAAATAAAACTTGTAGATCCTAAACAAACAAATCTCTTGCAGGCGCAGGgtaaagaaaatattccatTCTTTGGTAGTTGTGGCGGTGGTGgtgtggaaaaaatgataatcgttCCACCGAGATCACCTGAAGTAATAGACCTAGAAACAGATTCAAGCGAGGCGACAAGTCTTAGTAaagaaaagataataataCCTAGCTTCAAGAAACGTAAACTTGAGATACTGAGGGAAGGTGGCCTCGAAGTTACTGCTGTTGATTTAGAATCTAGACCTAGTGTTATCCAGGCAACGATAACGCCCAATTTACAAACGATTATTAAACAACAACAGCAATATCAATATCAACATCTACATCAATATCAACCTGAAGATAATAAGACTGTtcataatatatgtaataataccattattaataattctaATACTAAGTTAATATCCGTTACCGTAACTCCAGATATTAGCCATATGCTTCATTCGCCACAGGATCATAATCAAAATTCTCATTCTCAAGTTATGCACAACAACCaccaagaacaacaacagcaacaacaacaccAACTACTACTACAACAACAACTgctacaacaacaacaacaacaacatatgaataataataatcaatctaaacaccaacaacaacagcagtatcatcctcatcatcatcatcaccatgATCAACAACatcaacagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcagcaacagcaacaacaacaacaacaacaacatatgaataataatacgacGATGAATAACAATAACGTTGTAAACAGCAGAGTCATTAATCTTGGTAGTTCTAACAATACGACATTATTGCAATTGTATGCAAATGCGAACGTGGTTATTCCCTCtacaaatacaaatacgaatgcaaatacaaataataatagtaataacaacatcaatagtaataacaataataatcaaagaaattttattccacaACCACCAAATGGTAGAATACCACCGCCCAAAGTAATGCAATCTAgatcaatattttctcataaCGAAAGAATGGTTTATGGTAATCCAAAGGATGTAATAATGCCTCAGAAATTCGGTTCtcaaacaataacaacaacaacaacaaaaacgcaaaggattaataataatatggtcaataataatattacaattaacgCAACTGGAGTCTTAGATCTAACGCATAAATCTGATGATAAACCACTACCTCCGACAGCAACGGTAGCAGCAGCCACAGTAAatgcaacagcaacagcaacagcaacagcaactgCAACAAATGCAACGTTTACTTCTAGACCGAGCCTAGAGATTGTTAGAGTACCTATAGTACCGAGACCTAATCCAATGAATttagatatgaaaaataaagataaacaaATGCCAACGCCAACGCCAACGACGACGCCAACGGAAAATCAACCAAAGAAAAACCAGAATTTTAATTATCCTGCTAATATGATTGATACTAGAACGATGGTTTCTAATAATTTGGAAATAACTTTGGTGAATCCTAGTTCCAAACCAAAATCCTCACCGCAACAACAACAccaacaaattttattaccgCATGTTCATAATCAAtcaagaaataataattctggtAGTAATATACATCAGCAACAGCAAAGAAGACAACAACAGCAAGTGAATGGTAAATATCCGTTAAGAAATGAGCCACCGCCACCACCTCTGCCATTACCGCAACCGCAGCCGCAACAATCTCCGTCTTCTTATTCTACAAGAAAAACCAACCATATGGTAATACCAAATGTCCCAAATATCGCTAACGTACCGAGTTTAAATCACCTCAGCAATATTGCCAATTCGCCGTATGCTAGAAATACCATACCAGTTGATAGGAGAAAGTCTGAAGTAGTAGCAGCGGTCGGTAATAAAGAACACAAACGAAGTAACGAGAGCGAAAGATGTGGAATTGCCCCTCAGCAGCGACAGCAACAACAGGAAATCTGTGAaagacaacaacaacaacaaggaggaggagaggTACAGCAGCAGAGACATCTTGGTGGTACAAATGTAACGAATAATTACCATCctcaacaacagcagcagcaacaacaacaaccacaGCAACAAccacagcaacaacaacagcaacaacaaccgcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaccacagcagcaacaacaacaaccacagcagcaacaacaaggAATGCCACAAATTCCGGCGCTGCCACAGAATCCAGCATTCCTTTCGCAGTTGGCCAATAATCATGGAAAATTTTTACCAATGCTTGACCCAATGTATTATTCTGCATTTTATAGTGGAATGTTTCCACCGCCTATACCACCATCGGGATCGTTTCTTTCACCTGAAATAGACGCATATTATAAAGAACTATTAGCTTCTCAACCTGCAAGACTGGCGATGACCGGACAGCCCACTGTACCGACATCAAAATAA
Protein Sequence
MRSRETAVNQVISSPTQDEVLTISEKVVVRVNDLVTWLSPSLEWSWGREVFPQPVTGTSTSSSPDNSPRKEDTPIPQVLTDPGIDFSDVEKQQKEYESSFNTANKKSDGTDPPSQTRVVVLSYPRYCRYRALLRRLEGAEPSWLCSPVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSTSPGESSNESEASVASTSKTVSASIVPGLRPPSSGVRRSERKTSAEEKRFISDVQTFMNSRGTPLGKMPLLGYKQIDLFLFYTKVQNMGGYESVSANRLWKSIYDEIGGNTGSTSAATITRRHYERLLLPFERHQRGEEIKIRPAHGRRSKTSSMSEDIEIKQESDVPSPSQTPPASATSNIPTSTTVTPPLQSILSTPSLPGDKPKSEAGKISSLRSVRVKPERLKSLNTIIASTPTTCTQSIQLPSPPPSSNTLVTTPTSTPSTTPNDGQSVLERQLNSPLLMSHQLPPSSTPPSIPINTNTTTTNTNTIVNANSNTNANANVNVTAVVTLTPPPEKDMREIKLVDPKQTNLLQAQGKENIPFFGSCGGGGVEKMIIVPPRSPEVIDLETDSSEATSLSKEKIIIPSFKKRKLEILREGGLEVTAVDLESRPSVIQATITPNLQTIIKQQQQYQYQHLHQYQPEDNKTVHNICNNTIINNSNTKLISVTVTPDISHMLHSPQDHNQNSHSQVMHNNHQEQQQQQQHQLLLQQQLLQQQQQQHMNNNNQSKHQQQQQYHPHHHHHHDQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHMNNNTTMNNNNVVNSRVINLGSSNNTTLLQLYANANVVIPSTNTNTNANTNNNSNNNINSNNNNNQRNFIPQPPNGRIPPPKVMQSRSIFSHNERMVYGNPKDVIMPQKFGSQTITTTTTKTQRINNNMVNNNITINATGVLDLTHKSDDKPLPPTATVAAATVNATATATATATATNATFTSRPSLEIVRVPIVPRPNPMNLDMKNKDKQMPTPTPTTTPTENQPKKNQNFNYPANMIDTRTMVSNNLEITLVNPSSKPKSSPQQQHQQILLPHVHNQSRNNNSGSNIHQQQQRRQQQQVNGKYPLRNEPPPPPLPLPQPQPQQSPSSYSTRKTNHMVIPNVPNIANVPSLNHLSNIANSPYARNTIPVDRRKSEVVAAVGNKEHKRSNESERCGIAPQQRQQQQEICERQQQQQGGGEVQQQRHLGGTNVTNNYHPQQQQQQQQQPQQQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQQPQQQQQGMPQIPALPQNPAFLSQLANNHGKFLPMLDPMYYSAFYSGMFPPPIPPSGSFLSPEIDAYYKELLASQPARLAMTGQPTVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-