Pxan005670.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phylloecus xanthostoma
Gene Symbol
-
Assembly
GCA_030142555.1
Location
JARQTF010000286.1:19089-21985[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00019 0.013 15.9 0.3 2 23 326 347 325 347 0.97
2 11 0.00023 0.015 15.7 0.5 1 23 355 378 355 378 0.93
3 11 0.00028 0.019 15.4 3.5 1 23 423 445 423 445 0.98
4 11 7.1e-07 4.8e-05 23.6 1.5 2 23 493 514 492 514 0.97
5 11 7.8e-05 0.0053 17.1 1.2 1 23 519 542 519 542 0.95
6 11 1.1e-05 0.00073 19.9 0.2 1 23 580 602 580 602 0.98
7 11 7.5e-07 5.1e-05 23.5 0.8 1 23 612 634 612 634 0.96
8 11 2.8e-06 0.00019 21.7 1.2 1 23 640 662 640 662 0.99
9 11 1.4e-05 0.00095 19.5 0.2 1 23 668 690 668 690 0.98
10 11 0.0024 0.16 12.5 4.2 1 23 696 718 696 718 0.98
11 11 0.00052 0.035 14.6 0.3 1 21 724 744 724 745 0.94

Sequence Information

Coding Sequence
ATGGAAGTGGAAAACAGTGGTGAAACAACTGAAAGTCTTGGACGGACGGTTCAAAGTTCTGGCGAAGAGTGTCGTATATGCctgaaaaaatgttcaagGCTTTTGGAGTTATTCGAAAACGAAGAGGATATACCTCAAAAAATAATGGCGTTTGCTGCTGTTCAGGTGGAACAGGGTGATGGCCTTCCAACCACAATATGTTATCCTTGCCATCGTCTTTTAGATGTAtcttacaattttaaatgCCAAGTAGAAAAATCGGATGCAAAGCTGCGTGAATTTTTAAGCTGTAAAGAGACTGTAGATGTAGATACTATGAGTACATCCTTAACAAAATCGGTTAATGCTGTTATTACGGAAGCTATAGCTGATGAATTACCACACGAAGAAATAGAAACAGATACCCTTGATGATGGGAGTATTCACATTTCCAACATTATTAACATATCGGAATCAGATCCAAGACCCTCTGTCCAGACTATTGAACATCTTGCTGTACAAAACTTTACCAATGATCGTGATACTATTATCTTTGAAATGACTGATGGATGTAATCAGGAAGAGTCTCAAAATGAAACTGTTGAAGTAACTAATTATGAAGATGTAGCTTGTACTGATATTGATGATAAGGAGAttgattatgaaaaacatATTGTAGAAGATTCAGATATTTTAACTGAAAAGTTAACACAAAATGAAGAATCAGGAACAGAAACTGAGCCAATTAAACAGGAATTATCGTTACCTGAAGAAAGTGAATTGTCGGATGCTGAAGACAATTCTGGTTGTGATGTTAGTCTTGAAGATTCGACAGtaaaagcagaaagaaaaagtaatgcattagtagagaaagaaaatggaaaacgaTCATCATATATTACAAGTCAAAATGCAACGGATGACCatgaaacaaaaatggaaGCAGATGATAGCGATGAAGAAGAGAAGCCTTTAATAAATAGGACACAGCGACAAAAGTGTCCATATTGTATAAAGACGTTTGCGTCAAAATTAGCATTACAGAGGCACATAACTGTACACAAACATAAAACCAAGTTACGATACGTATGTTACATGTGCGATAAACAATTCTCCAATGTAGCAAAACTAAAAAGTCACATAGGTAACAGTCATGATTCCTCTAAAACTGAAGATAAATCATCAGCCGATGATACttccaataaaatatcagaTTCAGATAAGAGTTTAGAAAAACATGGTAATATGGCAGTGGAGACTCAAAAGtcagaaaagaagaattataaatttacatgtAAAGTTTGTACAAAGCAATTTACCTATCAAAAGTCCTTTATCACTCACGCAAAAAGTCATCCCGAGTATAAGCCTGCGGAAATGCTCAACGGAATCACGGAGCAAACGGGTACCCTGGAGGAATTACAGGACAGCCGTAACGAATTATCAAGCCCCAAGGCCAATGAATCTGACGACGACGACATGCCTTTAGAAGGGTTGCAGTGTACACAGTGCGGTAAATTATTCGCAACCAAAAGAAACCTTAAGAGACATATTTCAACCCACAGCGGtcttaaatttaattgttcaaCTTGCggtaaagaattttcaagggTAGACAAATTAAAGGAACATGAGCAGTCCAAACACAAGGAGGAAATATTTGGCAGATcggatgacgatgatgatgacgacaCGGATAACGAGAATAAAGCTACTGACGGTTCAGAGAATCGTAAGAAGGAGAAAAACAATAGACCTCATCAGTGTGCTTTGTGTCCAAAAGCATTTGCTCAGCCTCAATCATTAGCCAACCACATGGAGCGACATAAACGAGTGAAAGACACTCAGAAACGTTATCTGTGCGAAGTTTGCAGCAAGTGTTTCGCTCAGAGTGGATCATTGGTCGCGCATATGCGTACTCACACAGGTGTTAAGCCGTATGTCTGCAACGTGTGCAGTAGAGCTTTTACTAAAAGCACATACTTGCAATTGCATTTGCGTACCCACAGCGGGGAAAAGCCGTATATATGTCAGTATTGTAGTAGAGCATTTGCGCGCGCTAATACATTAGCCAGGCATATAACTATGCACACTGGCGAAGCAAAGTACCATTGCCAGATATGCATGAAATCGTTCAGGCGATTAACGTCCCTGAACGAGCATACTTATACTCACACAGGTCAAAGGCCTTACGCATGTAAAATTTGCACCAAAAGATACAACAATGCTGGATCTCTGTATGCGCATACTAAAAAATGTAAGGCCCAGCAAGTATCTGGTGTCGTACCGGCCTATACGGTTTCTGTGGACAATACTACCCATCCAAATGGCGCTCCTGTACCCCAGATGTTAATTTATTCCCAAAGAAAGTTAGTTGAGGAGACTCCAGCAGGCCAAGTACCGCCAGCTCCTCAATTCATGATCGCAAACGTACATAATCAAAAGCCATTGCCTACTAATATTATTCAACCATTTACCGTCGATGATCCAAGTGTTTATACAGTCAATGCCAAACAGTTTAAAAATCCGTATTACACGATTTATCCGAACATGTAA
Protein Sequence
MEVENSGETTESLGRTVQSSGEECRICLKKCSRLLELFENEEDIPQKIMAFAAVQVEQGDGLPTTICYPCHRLLDVSYNFKCQVEKSDAKLREFLSCKETVDVDTMSTSLTKSVNAVITEAIADELPHEEIETDTLDDGSIHISNIINISESDPRPSVQTIEHLAVQNFTNDRDTIIFEMTDGCNQEESQNETVEVTNYEDVACTDIDDKEIDYEKHIVEDSDILTEKLTQNEESGTETEPIKQELSLPEESELSDAEDNSGCDVSLEDSTVKAERKSNALVEKENGKRSSYITSQNATDDHETKMEADDSDEEEKPLINRTQRQKCPYCIKTFASKLALQRHITVHKHKTKLRYVCYMCDKQFSNVAKLKSHIGNSHDSSKTEDKSSADDTSNKISDSDKSLEKHGNMAVETQKSEKKNYKFTCKVCTKQFTYQKSFITHAKSHPEYKPAEMLNGITEQTGTLEELQDSRNELSSPKANESDDDDMPLEGLQCTQCGKLFATKRNLKRHISTHSGLKFNCSTCGKEFSRVDKLKEHEQSKHKEEIFGRSDDDDDDDTDNENKATDGSENRKKEKNNRPHQCALCPKAFAQPQSLANHMERHKRVKDTQKRYLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICMKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHTKKCKAQQVSGVVPAYTVSVDNTTHPNGAPVPQMLIYSQRKLVEETPAGQVPPAPQFMIANVHNQKPLPTNIIQPFTVDDPSVYTVNAKQFKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00292420;
90% Identity
iTF_01198845;
80% Identity
-