Basic Information

Gene Symbol
BAS1
Assembly
GCA_030142555.1
Location
JARQTF010000300.1:2304992-2307784[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.089 64 3.8 0.0 3 18 177 192 176 193 0.93
2 6 5.2 3.7e+03 -1.9 0.0 22 42 246 268 240 269 0.72
3 6 1.1e-10 7.5e-08 32.4 0.3 1 44 278 323 278 324 0.95
4 6 1.3e-10 9.2e-08 32.1 0.4 3 43 334 378 332 381 0.95
5 6 2.2e-13 1.6e-10 41.0 0.0 1 45 387 432 387 433 0.97
6 6 6.7e-15 4.8e-12 45.8 0.1 3 42 442 481 440 485 0.95

Sequence Information

Coding Sequence
ATGAGTGATTCAGAGGATTATACTCTCCTGGACGACATAAAAGCTTTGGAAAATGCTTTGGCACAAAAGAATCAGGTGCCGTCGACCTCGTCAACTACAACGACAGAAAACGTTTTGTCTAACCTTTATGAGAAAAGGGATCCTCTTGCTATAACGCAAGAAACACACGATGATTCTTCCTCGGACAGTTCTTTCTGCTGTGATGAAAATGGTCTTGACATTGAAAGCTTGAACGCATTGGATGATGTTCAAGCAGCACTTCTTCTTAACAAACAGTTGATTACCTGTTTGCAAACTGCCAAGATGAAATTTACGACTCTACTTGTGGAAtgtcgaaaaagaaaacaacttGTTGAGCAGAAAATTTTGCAGGCTGCAAAATCTACTTCTGCTTCAAAAATCACATTCTGCAATGCTGGCATGCCATACTTCAAAGACAAAGCTCGTTTCATTGCACCGATGAATGAAGATgctaaaataaagaaagccTGTGGTGAGTTACAGATTGTCCATCTTCCTACTGTTTGCCGGTGGACTCCTAAGGATAGGCGTATACTCATCAATGCAATTAAACAAGAAGCTATAACAGATGTTTTATCGGATAAAAAGCTACCAACTAAAAGGAAAGTTTCTCATCGAAAGATGACCAGGGCacaaagaagagaagaaaaaagggcaAATGTGTTGCCTAAAATGTTTCAGGATACTGTGGGACCTTTGGGTGCTAGAGAATTTGACTGGTTGAAAATTGCTGCAACTGATTTTGAAGGTAGGCACTCAGCTGAAGAGTGTCGTGTAATGTGGAATATATTCTTACATCCTGATATCAATAAGACAAAATGGTCTAAAGCAGAAGACGCGCATTTGAAGCAACTTGCtgaacaatataattttgaaaactggGATGAGATTGccttaaaattaaatactcgAAGATCAGGCTACCAATGTTTCATTAGGTTCAATACTACCAACCATCAATTTGGCTTTAAAGGATGTCAAtggagaaaagaagaggatcAAAGACTTACGGATGCTGTCAATAAGTTAAAGCATGGAGATTACATCCCTTGGGGTGAAGTTGCTAGCTGTATGCATAACAGAACAAAGCAACAGGTATACTTTCGCTGGACCTACAGTTTGGCACCACATTTAAAGAAAGGTCGATTCACAGCAGCGGAGGACAAAATCTTAATGGATGCTGTAGCTAAGTATGGAAaaaactttggaaaaataGTAGCTCTCTGTATGCCTAACAGAACTACAGTTCAGCTGAGTGACCATTACCAAACTTTAGTCATGAGAGGAAGAGGGAACCAGAATACATGGAGTCTTGAAGATGATGTACAACTTATTAAACTTCACGTAAAGCATGGTTCAAATTGGGTAAAGATTGCTAAGCACTTCCCCACAAAGACCAGGATCCAAGTTAGACATCGATTTTCTGCTCTTCTTCGATATCAGAGAAAGGGAATTTCCTTGAAAGACATTCCACGAACGTACCAAGGAAGTTTATCTGCAATGGAAACATTTCCTTTGgacgagaaaaaaatcgatgaaGAGAATACTGAAATAGTTGAAGATGAAATAGATGTTGACTCACAACTTCTATCCTATTTCGAACAAGTTGCATCTCCATCAAAACCtggtagaaagagaaagtctTATAGCCCAGATGAACTCGCGTCGAAAATTCCGAAATTGTATGAGACCCTACAAAGTTTAAGTGCCAATCTCGTTATCTCTGATAGTTTCTATACACAGAcattatcttttaaaaatagacaaaTGCTGTTTGCTTTAAAGATGTATGGTGAATCGAAAGCAAAAGATGCTGCAAAACATCGTAAAAGTATAGAAGATATACAGAAAATGATGTTTGGCAACAAACACAACTCAGACACCTATAACCATTTCGTACCACCATTACCTTTCAATATGAtgttgaaaatcaaaaaagcaATTCACAAAAAAAGTTTAGAATATGAATTAAACACtgatgaacaattttttgcaGAAGTGAACATGCATCTAGAAACTCCTGAAAAGATAATTTCTATGATAGGCATTGATTTGCATCTagagtttgaaaaaatttctcagATCTTAATTGGGTCGAGTAAAAAAACAGAGAAGCAAAGTGTCATCAAAAAGATTTACATACTACCTCCGCAAAGTGAACAGCAAAAGGTAAATAATTCGCATGGTATAAAAAGGCCTATAGAAAATTGCAGTAAAGATGACCGGGAGAAACTGAAACTATCATCTCTTTCCAATAATCCTAGCACTTCTGGTATTTCAGTCgatttaaatacaaaagatGTAAGTCAATCAGACGCAGCGTCATCGCCACAAATGATTCAGGAAATATTGCCGTCATCCGATTACTCAATGTTCGAACCAAATTATTCAACAGTATTTGGCTTTCGCAACATACTTTCGTCAAAGCAAATGTCAAACGTAGACGAAGAAGCTGTAGACGAACAGAAAAACATGCTCAATTTTCATCCGGATGGCCGCAAAGCTTTTGAGTTATTGAGACAACgtcttttaaaattgtttaaggTTCCAATAGGCATGTCACAAATTCTACCGCCTGAAATACACGGCggagagaaaatatttctgtccTACGCAGAAAATATGCTGAAAAGTAAACTAGAAgcgaaaagtaaaaaagtcaTTGTTGTTCCTGAAGATACAGTTAAAACCGAAATGGAACCACGcgttaaaaaggaaaaggtcGATAGGCAAGGTGAAACTGTACACAGCTTAGATCttattaagaattaa
Protein Sequence
MSDSEDYTLLDDIKALENALAQKNQVPSTSSTTTTENVLSNLYEKRDPLAITQETHDDSSSDSSFCCDENGLDIESLNALDDVQAALLLNKQLITCLQTAKMKFTTLLVECRKRKQLVEQKILQAAKSTSASKITFCNAGMPYFKDKARFIAPMNEDAKIKKACGELQIVHLPTVCRWTPKDRRILINAIKQEAITDVLSDKKLPTKRKVSHRKMTRAQRREEKRANVLPKMFQDTVGPLGAREFDWLKIAATDFEGRHSAEECRVMWNIFLHPDINKTKWSKAEDAHLKQLAEQYNFENWDEIALKLNTRRSGYQCFIRFNTTNHQFGFKGCQWRKEEDQRLTDAVNKLKHGDYIPWGEVASCMHNRTKQQVYFRWTYSLAPHLKKGRFTAAEDKILMDAVAKYGKNFGKIVALCMPNRTTVQLSDHYQTLVMRGRGNQNTWSLEDDVQLIKLHVKHGSNWVKIAKHFPTKTRIQVRHRFSALLRYQRKGISLKDIPRTYQGSLSAMETFPLDEKKIDEENTEIVEDEIDVDSQLLSYFEQVASPSKPGRKRKSYSPDELASKIPKLYETLQSLSANLVISDSFYTQTLSFKNRQMLFALKMYGESKAKDAAKHRKSIEDIQKMMFGNKHNSDTYNHFVPPLPFNMMLKIKKAIHKKSLEYELNTDEQFFAEVNMHLETPEKIISMIGIDLHLEFEKISQILIGSSKKTEKQSVIKKIYILPPQSEQQKVNNSHGIKRPIENCSKDDREKLKLSSLSNNPSTSGISVDLNTKDVSQSDAASSPQMIQEILPSSDYSMFEPNYSTVFGFRNILSSKQMSNVDEEAVDEQKNMLNFHPDGRKAFELLRQRLLKLFKVPIGMSQILPPEIHGGEKIFLSYAENMLKSKLEAKSKKVIVVPEDTVKTEMEPRVKKEKVDRQGETVHSLDLIKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01198593;
90% Identity
iTF_00770298;
80% Identity
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