Plin005139.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phylloecus linearis
Gene Symbol
gata4
Assembly
GCA_030142575.1
Location
JARQTE010000273.1:2327985-2347067[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.9e-18 2.3e-14 52.7 3.2 1 34 637 669 637 671 0.97
2 2 2.4e-19 6.3e-16 57.7 4.0 1 35 691 724 691 725 0.97

Sequence Information

Coding Sequence
ATGATGCTTCACGCGTTGGGACACTTAACGATTAGTCATCtactGGAGTACGTGGAAAATTCGACGGAGCCAACGTCCCGGATAGTCGGTGAGAACGGGGAAGATGCTGTGGATTTAGATGTCACTAGAAGAACGATAAAAGTCGAGAGCGACCAGAATCAGAGAGCTGAGGAGAGACAGCAACATCAACAACAGCAGTTGAACTACGCCGGCGCGGATGAAGGCGGGAATGGCGTGGGCGTGCTGGAGGCGGGTCAACCGGAAATGGAAAATGGCGCCCTGGTGGAGTCGACCGGAGCTGAGGCCGTGGTAATTCCCGTTAGTACTGAACACGAGGAGGACGCCAGTGCCACCTATACTCTACATCAGCTTGGATATCATCCTGGTCACATCATTCATGAGAGgACTTACGTAGCTGAAGAAACTTGTCAATACACTGAAAGTGATCTTCGGGAAGATCAGCGAcatcaacagcagcagcactCTCAccatcatcagcatcatcacGATCATCAGCAACACCATCAGCAGCAGGCTCAGGCTCAGTCTCAGTCTCAGTACGGTCAGCTTGGGGCGGGAGAGGTCCCGGTTCCCGAAGGAGGGGATAGCCGCCACCCGACGGAGACCTCTGTCCCGCCAGAAGGAAACCGTGGCACCAGTCACATGCCTCACTCCACGATGCATCGGTACGGAACAGAGACGCTCTCCCCGACGGATCATCAGCAACACCACCTGTCGGATCCGCATACTCTGAGTGCTCATCGTCACATGGAAGaacaccatcatcatcatcatcatcatcaccaggAGACCGACGAGGACGTGGAACGTGTTAGCAGTATAGCGGCAGCGATGAGGGGTGCACGAGGTGACTTCACCCTGGGTGGTGTGCTCTTTTCGAACCTGACGAGTGTCGCCGGTGCCGGTACTCCTTCTGGGAATGGTAGTGGGGGCaatcctcatcatcatcatctagAGGATGTACTCCCGGAGGATCCATATCTTCAGCACCAGATACGTGCCGGTGGATCTGCTTCGGCTGGTGGTACTGGTGGCGTTTCGCCACCGGTTCGTACTGGCAGTTCACCAGGAAGTAGTAGGAGTCCTCATGATGATCAGGGTCTGTCATCGCCTAATAGACATACTGGACAAAATGATGGTGGATACAGTCCGAATGATCAAGGAAGACTTCAGAGCTTTACTCATCTCACGGCGATGCAACCTCCTCCGTCGGTTCAGACCAATCATAATCTTCAGGATGCTGATAGGGTCTCTGATCAGTTGTATATGGACACTATTTACACTCATCATCCTGGTGGGACACCGCATCATCATCAGGATCACGAGCAGGCTACTTCTACACCCTATTCGCCTACCGGACCACTTTCCAGTTCCTCTCTGTATCGCACCATGACTGGCGTGGGGCCTATAGCCGGTAGTGCTAGCGCTGGTAGCGGATATGGTCTTCCTTACATGACCAGCAGTCCTACTGAAATCTCAGCATCCTCCCAACAGCTATGGTCATCCCAAGgACTGAATTCATCTCTTTCTACAATCTCCGAGGAATACGGTAGCAACAAATCTGGCGCAAGCGTGATCAACCAGACTCTACCAGCGTTCTCTCAACCCTTTGGCGGTAGACCTACTTTTCGAGGTTATAGTCCACCCTATTCCTCGCAACAGGCCACGACGGGCACCGTTAGCGTTACTGGAAACGATACCAGTTCCTGGGCTTACGCGCCATCCTCGAACGACGCTCTGTCGTCACCGTACGGTAACGTCGGGACGATCTCCAGGAGACAATCGTCAACGACCCCTACCGCGGCCAGGCAACATCAACTCAGTGCAGCAGCTAGTTTAACGGCCATGCACAACATCGAAGCGGAGTACTTTACGGAGGGCAGGGAGTGCGTGAACTGCGGTGCAATTTCCACTCCTTTATGGCGAAGGGACGGGACCGGCCATTACCTCTGCAACGCCTGCGGACTCTACCACAAGATGAACGGCATGAATCGTCCTCTAGTCAAACAACCACGGCGCCTGTCGGCTTCGCGGCGCGTAGGTCTCTCTTGCAGTAACTGccagacgacgacgacgtcctTGTGGCGTCGCAACGCCAGTGGTGAACCCGTATGCAACGCGTGCGGATTGTACTTCAAGCTTCATAGTGTTAACAGGCCTCTTGCCATGAAGAAGGATAGCATACAGACACGCAAGCGAAAGCCCAAGGGTGGCATGAAGTCAACGGACACTGCAATATCTGGATCCGTTGCGCCATGCACTATTAatcacaacaacaacaacaacaacaataataataacagtctGAAGTTAGAACCAGTCTACGCTTGCTGGCATCctcagcaacagcagcaacatcaGCATCTCATCGAAGGCCATTCACCAAAGGTCGAATATCCATCTCCACCCTGTACAACTCGTTCGCCAGTGCTGGTATCCGCTGGACATTCTCCGGATCATCATCAACTGACATCGTCCCATATCGTCACCCTGGGTAACTCGTCGCCCAGTCCTGCTAGTAATAAGATCATGTTGGACAATGGTCATCTCGAGAGACCAACCGTGGTTTCGATATCGTCCTAA
Protein Sequence
MMLHALGHLTISHLLEYVENSTEPTSRIVGENGEDAVDLDVTRRTIKVESDQNQRAEERQQHQQQQLNYAGADEGGNGVGVLEAGQPEMENGALVESTGAEAVVIPVSTEHEEDASATYTLHQLGYHPGHIIHERTYVAEETCQYTESDLREDQRHQQQQHSHHHQHHHDHQQHHQQQAQAQSQSQYGQLGAGEVPVPEGGDSRHPTETSVPPEGNRGTSHMPHSTMHRYGTETLSPTDHQQHHLSDPHTLSAHRHMEEHHHHHHHHHQETDEDVERVSSIAAAMRGARGDFTLGGVLFSNLTSVAGAGTPSGNGSGGNPHHHHLEDVLPEDPYLQHQIRAGGSASAGGTGGVSPPVRTGSSPGSSRSPHDDQGLSSPNRHTGQNDGGYSPNDQGRLQSFTHLTAMQPPPSVQTNHNLQDADRVSDQLYMDTIYTHHPGGTPHHHQDHEQATSTPYSPTGPLSSSSLYRTMTGVGPIAGSASAGSGYGLPYMTSSPTEISASSQQLWSSQGLNSSLSTISEEYGSNKSGASVINQTLPAFSQPFGGRPTFRGYSPPYSSQQATTGTVSVTGNDTSSWAYAPSSNDALSSPYGNVGTISRRQSSTTPTAARQHQLSAAASLTAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCQTTTTSLWRRNASGEPVCNACGLYFKLHSVNRPLAMKKDSIQTRKRKPKGGMKSTDTAISGSVAPCTINHNNNNNNNNNNSLKLEPVYACWHPQQQQQHQHLIEGHSPKVEYPSPPCTTRSPVLVSAGHSPDHHQLTSSHIVTLGNSSPSPASNKIMLDNGHLERPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00295675;
90% Identity
iTF_01395520;
80% Identity
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