Pful015841.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phragmatobia fuliginosa
Gene Symbol
-
Assembly
GCA_932526455.1
Location
CAKOBD010000091.1:195751-198874[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0038 0.34 12.2 0.3 1 23 235 258 235 258 0.94
2 16 0.00024 0.021 15.9 5.4 1 23 263 285 263 285 0.98
3 16 0.013 1.1 10.5 0.9 1 23 315 338 315 338 0.94
4 16 0.013 1.1 10.5 0.6 2 23 399 421 398 421 0.96
5 16 0.00043 0.038 15.1 1.0 1 23 427 450 427 450 0.93
6 16 0.00021 0.019 16.1 0.6 1 21 453 473 453 474 0.95
7 16 0.048 4.3 8.7 0.5 1 23 482 505 482 505 0.94
8 16 0.0007 0.062 14.5 0.4 2 23 546 567 545 567 0.96
9 16 0.0007 0.062 14.5 1.2 1 23 573 595 573 595 0.97
10 16 0.0039 0.35 12.1 1.9 1 23 631 653 631 653 0.97
11 16 0.81 72 4.8 0.5 3 23 659 679 658 679 0.91
12 16 0.0019 0.17 13.1 0.6 2 23 696 718 695 718 0.96
13 16 0.0008 0.071 14.3 0.6 1 23 724 746 724 746 0.98
14 16 0.041 3.6 8.9 7.2 2 23 753 774 752 774 0.96
15 16 2.8e-05 0.0025 18.9 2.1 1 23 780 803 780 803 0.97
16 16 3.4 3e+02 2.9 3.9 3 23 810 831 808 831 0.95

Sequence Information

Coding Sequence
ATGGTTACAAACCCGCCTGATCCTAATAACCTGGAATGGCTGAAACACAAACTGAAGTCAGTATGGACTTCACCAAAGTTCTGCGGTCTGTGTTTGGAGAATGCCGGCAACTTTTGTTCGGTGGACATGGAACTGGTTATGAACAGGCAGAACTATTCGAGATGTCTTCAGGATATCATAAACTATATTTTTAATGATGATATTGAAAACTTCATGTCAAGCCATTATTTATGCGACTCTTGCACAGAAAAAATTATTCAATCATATCTCTTCATACACAATACTAAGCAACTCTCAAAAATTATAAACAATTGCGTCACAGATTTATATTCCAAAGTTGTTGATGGTAACGACCAAATAGGCAACTATGGCGATCTAGTCGACTGCGGGAATGTCATGATTGTTCTAGAAACTGACACAGATTTGTGCAAAACTATTATGGATACAAAAATGACTGAAATTGTGCCAACAGCTACCCCAATACCCATGAAGATAGAACCCGAAGTCCCTAGAATAGAAAACGTTAAATCTGATGAAGTGGTACCTCCTGATGATGATGTAATTCCAAGCGAACCTGTCACAAGAATATCAACCCCTAAACCTTTGAAGTCTGAGGACACTCCAAATATTACTTTGAAAGAAGGTCATATTGTTATAAAACCGTTGAACTCAGCTAGGAATTTGATTCCGCGGTTCAATACTTACGAATGTGCCAGTTGTCCAGAAATCTTCACCACTTATAGGTCTTTGAAGGAACACGAAAAAGCCAAGCATAATAAATCTGTGTTCCATTGCAACTTGTGCAATAAGTCCTACAATACTCGGCAGTATTTGAACATACACTACAAGACGCATTCAAAAGCAAAGTGCAAGTTTTGTCAAGTAATTTTGCCTGAAGGAGAAATAATGCAGCATTTGAGAGAAAACCATCCCTATTTGGTGTTTCCTTGTAAGTTCTGCGACTTGGTGTACTACAGCCAAGACTCTATGATGACGCATTTCAATTTGAGTCATTTAGTAAACAATAATAAAGTTAAGTCGCAGTGTATCATGTGCTTAAAGGATTTCCAAGACGGTGAAATCACGAAACATAAATGCAAGTTCTCTTGCTCCGAGTGCTTTGTGATGCCTTGCGTTCATTATAAGTATCTAATGTCTTATAGAGAACAGACGCTGAATCACGCTAACAAGATAAAATGCGTAGATTGTGATTATCTAACTAGAAGGAAAGAACATCTAATTGGTCACGTGAACAGAGAACATTTGGATCATCATCCGTTCACTTGCGCCGACTGCGGTCAACAGTTCTACACAAAGTTAAGCTTGAAAACTCACATAGTACAATTTCATCAAGAATTTAGTTGCGAGTACTGTGATTTTGAATTCAAAGACAACAACAGTTTGGAGAACCACAGAAAAGCATGTAAATTGGTCATAAGAGCTTTTACTTGCAACCATTGTGCAGCATCATTTGATATCGAAGAGGAATTAACCACCCATGAGAACTTGAGACATAACGACAGTGTTCACGCTTGTAATCTTTGCAAGAGTAAATTCCTGACTAATCTAGAACTAGATGAACACCACGCCAGAGTCCACGGAGGTATCCAATGCAAGAAACGAAGGAAACGTATAGAATGTACTCTATGTGATTTGACGTTTAAAAATATCAAAGAGTTAGAACAACACGAGAAAAACCATGACCAGGATGAGATATACCCGTGCAAAGAGTGTCCAAAACAGTTTAAAAGTCTAATGAAATTGTACGTACACAACCAAAGGCATTACACAAAGAGGATTAAATGTCCCCGATGTAACAAGAAAGTGGCCGCCTCGTTCTATTCACAACACGGTGTCCGTTGTCCTTACAAAAGAGAGGGAGCATTGAAACACGTTTGTGAAGTTTGTGGCAAGGCATTCCATTTGGAATCTCTCTTGCGCTTCCACCAAAGGATCCATTTAAAACCGGAGCCCTGCCCTCAGTGTTACAAAATTATCAAGTTTTCCAGTTTTAAGAGACACATGGAACAGGTGCACGGTGATCCATCAGAGAAAACAAAAATAGTAGCAAAGCAGCCTACCATTGAATGTCAAATATGCGGGCATCTTGTCAGAAAGAAACAGGATTTGGAGGCACACATGAACAGATACCATCTTAAAATTAAGCCCTACGTTTGTGAGATATGTAACAAAGGTTTTTGTGGGAGAATTCGCTTAAAAGAGCATGTGGCTACACACAGCAATGAAAATAATTGCTTCTGTTCTATTTGTTTTAAGAAATTTGCAAACCGAGTGTGTTTGAAAATGCATTTTAGGATGCATACTGGGGAGTTGCCATACTCTTGTGATATATGCGGACAGAAATTCAGGTCTTCCAGTATGATGAAGACGCACCGGCTAAAGAAACATTTGGAAAAAACCGTATGCTGTCCATTATGTGATAATATGTTCTACATGGTACGGGATATGAGACATCACTTCAAGAAAATGCATTGGAAGTTGAAGGATAGACCGTTTAATGTCAGAGAAGTTGAGGAACTCGGGGAACAGTATTACCATTTATTTGAAGATGGGAGATTACCGAAACTAGACACTTGA
Protein Sequence
MVTNPPDPNNLEWLKHKLKSVWTSPKFCGLCLENAGNFCSVDMELVMNRQNYSRCLQDIINYIFNDDIENFMSSHYLCDSCTEKIIQSYLFIHNTKQLSKIINNCVTDLYSKVVDGNDQIGNYGDLVDCGNVMIVLETDTDLCKTIMDTKMTEIVPTATPIPMKIEPEVPRIENVKSDEVVPPDDDVIPSEPVTRISTPKPLKSEDTPNITLKEGHIVIKPLNSARNLIPRFNTYECASCPEIFTTYRSLKEHEKAKHNKSVFHCNLCNKSYNTRQYLNIHYKTHSKAKCKFCQVILPEGEIMQHLRENHPYLVFPCKFCDLVYYSQDSMMTHFNLSHLVNNNKVKSQCIMCLKDFQDGEITKHKCKFSCSECFVMPCVHYKYLMSYREQTLNHANKIKCVDCDYLTRRKEHLIGHVNREHLDHHPFTCADCGQQFYTKLSLKTHIVQFHQEFSCEYCDFEFKDNNSLENHRKACKLVIRAFTCNHCAASFDIEEELTTHENLRHNDSVHACNLCKSKFLTNLELDEHHARVHGGIQCKKRRKRIECTLCDLTFKNIKELEQHEKNHDQDEIYPCKECPKQFKSLMKLYVHNQRHYTKRIKCPRCNKKVAASFYSQHGVRCPYKREGALKHVCEVCGKAFHLESLLRFHQRIHLKPEPCPQCYKIIKFSSFKRHMEQVHGDPSEKTKIVAKQPTIECQICGHLVRKKQDLEAHMNRYHLKIKPYVCEICNKGFCGRIRLKEHVATHSNENNCFCSICFKKFANRVCLKMHFRMHTGELPYSCDICGQKFRSSSMMKTHRLKKHLEKTVCCPLCDNMFYMVRDMRHHFKKMHWKLKDRPFNVREVEELGEQYYHLFEDGRLPKLDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00441826;
90% Identity
-
80% Identity
-