Basic Information

Insect: Phragmatobia fuliginosa
Gene Symbol: -
Assembly: GCA_932526455.1
Location: CAKOBD010000137.1:1336039-1339379[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.015 1.3 10.3 0.0 2 23 2 24 1 24 0.95

2 16 2.2 2e+02 3.5 0.0 2 23 49 71 48 71 0.90

3 16 7.8 6.9e+02 1.8 4.8 2 23 94 115 93 115 0.95

4 16 5.6e-06 0.00049 21.1 1.0 1 23 119 142 119 142 0.96

5 16 0.22 20 6.6 0.4 3 20 149 166 148 168 0.94

6 16 9.9 8.8e+02 1.4 1.9 3 19 177 193 175 198 0.73

7 16 0.00075 0.067 14.4 0.5 1 23 205 228 205 228 0.97

8 16 0.12 11 7.4 1.4 2 23 270 292 269 292 0.93

9 16 0.036 3.2 9.1 5.0 1 23 361 383 361 383 0.98

10 16 0.019 1.7 10.0 2.6 1 21 387 407 387 408 0.93

11 16 3.2 2.8e+02 3.0 1.2 2 20 418 436 417 438 0.92

12 16 2 1.8e+02 3.6 0.3 1 14 445 458 445 468 0.76

13 16 3.1e-05 0.0028 18.7 2.1 1 23 475 497 475 498 0.96

14 16 0.00023 0.021 16.0 0.5 2 23 504 525 503 525 0.95

15 16 0.00036 0.032 15.4 0.1 1 20 531 550 531 553 0.93

16 16 0.0001 0.0089 17.1 4.4 1 23 559 582 559 582 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.015	1.3	10.3	0.0	2	23	2	24	1	24	0.95
2	16	2.2	2e+02	3.5	0.0	2	23	49	71	48	71	0.90
3	16	7.8	6.9e+02	1.8	4.8	2	23	94	115	93	115	0.95
4	16	5.6e-06	0.00049	21.1	1.0	1	23	119	142	119	142	0.96
5	16	0.22	20	6.6	0.4	3	20	149	166	148	168	0.94
6	16	9.9	8.8e+02	1.4	1.9	3	19	177	193	175	198	0.73
7	16	0.00075	0.067	14.4	0.5	1	23	205	228	205	228	0.97
8	16	0.12	11	7.4	1.4	2	23	270	292	269	292	0.93
9	16	0.036	3.2	9.1	5.0	1	23	361	383	361	383	0.98
10	16	0.019	1.7	10.0	2.6	1	21	387	407	387	408	0.93
11	16	3.2	2.8e+02	3.0	1.2	2	20	418	436	417	438	0.92
12	16	2	1.8e+02	3.6	0.3	1	14	445	458	445	468	0.76
13	16	3.1e-05	0.0028	18.7	2.1	1	23	475	497	475	498	0.96
14	16	0.00023	0.021	16.0	0.5	2	23	504	525	503	525	0.95
15	16	0.00036	0.032	15.4	0.1	1	20	531	550	531	553	0.93
16	16	0.0001	0.0089	17.1	4.4	1	23	559	582	559	582	0.97

Sequence Information

Coding Sequence: ATGGTGTGCGTCTACTGTGCCGACCCTTTCAAAGACCCCGTAGAATTCAGGGCTCACATGAATAAGGATCATAAAGTCTTTAATTCTCGCATAGCTTTCCATCATTGTGCAGAAGGGTACATCAAAGTTGACTGCACCGATATAAAGTGTAGAATATGCTCTGAACAGTATCAGACTCTGGAAGAAATTGCTGAGCACCTAGTCTCTGCACACAAAAAGCCTTTAAACTTAACCGTTGAGTGTGGACTTCAGCCTTTCAAATTTGAAAGTAATACGTTATCGTGTGCAATTTGTAATACGAAATGCATTTGTCTAAGGCAACTGAGCAGGCACACCCAAAGCCATTTCTGGAGGTATACCTGCGAGGCCTGTGGCAAATCTTACGCCACTAATACAACATTGCGAAGTCACATGAGGTTCTCCCACATTAATAACGAGAGAATTTGTAGGAAATGTAAAAATACTTTCAGCAGTTTAGAAGAAAAGAGAAAGCATTTGGCTGGATCTCCCAAATGTTGGTCTCACTTATGTTGTGTGTGCGGCGAGCGTTTCATGACATATTACATAAAACAACAGCACTTATCCGAAGTGCATGACGTCAAAAAGAAAACCTTCGTCTGTGCAGAATGTGGGGAAATGTTTATAGATAGGAAACGTTACAGGGTACACTTTAGAATATTTCACACTGATGATAATTACACATGTTCTTGTTGCGAAAAAAAGCCGTTCGACGTCATGCGCCAGAACGCACAAACTCTACTACAATATACCACAGCTTACCCGTTCAAGCTCCCGGACACATCCATGGTTTGCGTATTTTGCTGTGAGAGTTACGATGACCCCTCCGAGTTTAGAAATCACATGCACATCGAACATCAGGACTTCAAAATGTATATGGCATTTGCTCATGTCCCTGAAGGATTCATAAAAGTTGATTGTACGGAGTTAAAATGTAGAATATGTTCACAACATCTCGTCAACATCGAGGATGCGGCAGATCATTTAGTAAAAATACACAATAAAATCATCATACTAAACCACGATTTGGGTTTACATCCATTTGTCGTAGAAAAGGATAAATATTCTTGTACGATTTGTAGTGAAAAACATTCAACTTTATCTCTGTTGAGTAAACATATGCATCGGCATTACGTTCAGTATACATGCGATGCTTGCGGAAAATCTTACGCCACAAAAACGTCGTTACATTGCCATCTGAGATATAACTGCGGCACTGGACCATCAACTAAGAAATGCCGTAAATGTAAGAGCGTATTCCATTCTTTGAAGGAGAGACAGGCACACTTAGAGGCTTCCAAGAAGTGCTGCCAACACGTATGTAACTTATGCGGAGACAGATTTGTGACGTGGACAATAAAACAATCTCATTTGACAGAAGTTCACAATGTGCCGGCAAAATCTTACAGCTGTCCTGAATGTTCTCGGGTGTTCGCGCAAAGAAATTCGTTCCGGGCTCATTTTAAAATCCACCATACGAACGACTATGTCGAGTGCTCGTATTGTGAAAAACGATTTGAGAATGATAAGAGCTTGAAAAAGCATGTTGTTATACATACGGGAGAAAGGGGTTTCATCTGCACTGTATGCGCTAAGGCATTTCCCAGAAAATCTACACTCGACCAGCATATGTGGATACACAGAGAAGTAAAGAAACACGAATGTAAAATGTGTAATAAACAGTTCAATCAAAAAGTCAGCTGGAGGACCCATATGAAGTCACGACATCCGGATTGTGAATGGACTGATGTGGGATAG
Protein Sequence: MVCVYCADPFKDPVEFRAHMNKDHKVFNSRIAFHHCAEGYIKVDCTDIKCRICSEQYQTLEEIAEHLVSAHKKPLNLTVECGLQPFKFESNTLSCAICNTKCICLRQLSRHTQSHFWRYTCEACGKSYATNTTLRSHMRFSHINNERICRKCKNTFSSLEEKRKHLAGSPKCWSHLCCVCGERFMTYYIKQQHLSEVHDVKKKTFVCAECGEMFIDRKRYRVHFRIFHTDDNYTCSCCEKKPFDVMRQNAQTLLQYTTAYPFKLPDTSMVCVFCCESYDDPSEFRNHMHIEHQDFKMYMAFAHVPEGFIKVDCTELKCRICSQHLVNIEDAADHLVKIHNKIIILNHDLGLHPFVVEKDKYSCTICSEKHSTLSLLSKHMHRHYVQYTCDACGKSYATKTSLHCHLRYNCGTGPSTKKCRKCKSVFHSLKERQAHLEASKKCCQHVCNLCGDRFVTWTIKQSHLTEVHNVPAKSYSCPECSRVFAQRNSFRAHFKIHHTNDYVECSYCEKRFENDKSLKKHVVIHTGERGFICTVCAKAFPRKSTLDQHMWIHREVKKHECKMCNKQFNQKVSWRTHMKSRHPDCEWTDVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01360998;
90% Identity: iTF_01360998;
80% Identity: -