Basic Information

Insect: Phragmatobia fuliginosa
Gene Symbol: -
Assembly: GCA_932526455.1
Location: CAKOBD010000085.1:5869627-5881062[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.7 3.3e+02 2.8 0.1 1 23 84 107 84 107 0.92

2 19 1.2 1e+02 4.4 0.2 3 23 112 132 110 132 0.95

3 19 0.19 17 6.8 0.3 2 23 382 404 381 404 0.95

4 19 0.13 12 7.3 0.3 1 21 412 432 412 433 0.94

5 19 0.051 4.5 8.6 0.7 3 23 444 464 443 464 0.96

6 19 1.6 1.5e+02 3.9 1.2 1 23 480 503 480 503 0.87

7 19 0.0005 0.045 14.9 0.7 1 23 512 535 512 535 0.95

8 19 0.34 30 6.0 0.7 2 23 547 569 546 569 0.96

9 19 0.00084 0.074 14.2 0.1 3 23 613 634 611 634 0.93

10 19 3.6 3.2e+02 2.8 3.3 1 23 639 662 639 662 0.95

11 19 3.5e-05 0.0031 18.6 1.9 1 23 668 690 668 690 0.97

12 19 0.00023 0.02 16.0 1.8 1 23 697 719 697 719 0.98

13 19 8.9e-05 0.0079 17.3 2.3 1 23 724 746 724 746 0.96

14 19 3.8e-05 0.0034 18.5 0.6 1 23 752 774 752 774 0.98

15 19 5e-07 4.4e-05 24.4 1.9 1 23 780 802 780 802 0.98

16 19 0.0004 0.035 15.3 3.5 2 23 809 830 809 830 0.98

17 19 0.00094 0.083 14.1 0.3 2 23 838 860 837 860 0.97

18 19 0.00036 0.032 15.4 0.3 1 23 865 887 865 887 0.95

19 19 0.038 3.3 9.0 4.7 1 23 893 916 893 916 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.7	3.3e+02	2.8	0.1	1	23	84	107	84	107	0.92
2	19	1.2	1e+02	4.4	0.2	3	23	112	132	110	132	0.95
3	19	0.19	17	6.8	0.3	2	23	382	404	381	404	0.95
4	19	0.13	12	7.3	0.3	1	21	412	432	412	433	0.94
5	19	0.051	4.5	8.6	0.7	3	23	444	464	443	464	0.96
6	19	1.6	1.5e+02	3.9	1.2	1	23	480	503	480	503	0.87
7	19	0.0005	0.045	14.9	0.7	1	23	512	535	512	535	0.95
8	19	0.34	30	6.0	0.7	2	23	547	569	546	569	0.96
9	19	0.00084	0.074	14.2	0.1	3	23	613	634	611	634	0.93
10	19	3.6	3.2e+02	2.8	3.3	1	23	639	662	639	662	0.95
11	19	3.5e-05	0.0031	18.6	1.9	1	23	668	690	668	690	0.97
12	19	0.00023	0.02	16.0	1.8	1	23	697	719	697	719	0.98
13	19	8.9e-05	0.0079	17.3	2.3	1	23	724	746	724	746	0.96
14	19	3.8e-05	0.0034	18.5	0.6	1	23	752	774	752	774	0.98
15	19	5e-07	4.4e-05	24.4	1.9	1	23	780	802	780	802	0.98
16	19	0.0004	0.035	15.3	3.5	2	23	809	830	809	830	0.98
17	19	0.00094	0.083	14.1	0.3	2	23	838	860	837	860	0.97
18	19	0.00036	0.032	15.4	0.3	1	23	865	887	865	887	0.95
19	19	0.038	3.3	9.0	4.7	1	23	893	916	893	916	0.97

Sequence Information

Coding Sequence: ATGACATCGGATGAGTCGGACGATGAACCGCTATCTGTTATTGCGGCTAACAAGAAGCTACACCCAGAAGCCTTCATCGAAAAAAGCGAAATATCATCTAGTAAAAAAGTTGTTAAAAAGAAGAAGAAGAAAGTTCCTCCTAAACGATTACCGATTACCATAAACATCCAGAAACCAGATCTGCCTCCAGTAATAGAAAGACCTGCTGATGTATGGCTCTATTTAAAAGATTTTAACCCTGGAGGGCCTTATAGCTGCCTATTATGTCCTGAGTGGTTTATAAATAGATCTAAAATAATTCTACACTATATTCTGAATCATAAAAAAGATTTTTGTGGTATTTGCAGGTATTTTGTGGCAGACAGGGAAAGCTGGCAGAGCCATGTGCAGTTCCATACGCCATGGCCGTGTTCACAGTGTATTGAAAACTTTCCAACTGAGCCTATTTTACGTTTGCATTTAAAGACTGTTCACAAGCTTGTGCACTGCAGACTCTGCCATTTTAGAGTTTCTGATGGTGAGTTGTATAACTCACATTTATTTCAAAAACATAATGTATCAAGTGTAGCAAATGTAGATGACGAGAATCTATGGAGTTATGATGATGACGGTTCCACTGTCTTCTCCTGTGTACTATGTTCAAAGACTGATAATGCTTCAAGATTGTTTTTCAATCACTACATGGGTTACCATCATTTCACTTTAAAGTGCTTCTCATCTATTTTGGCATGTAAAGACGATGTACCTTTTGTGGTGCGTGGAGCTGATGTTAGAAATGAATTCATTGAAGAACAATTGAAACGTCACCCTCGTTATGGCTATGTAGATTTAGAGCTTAAAGTCGGCAATAGCTCAGGTTCAAACGTGAGTGATTCAAAAGCCCTGTTGCCAAGTATCAAGCATGAGAATGGAAGTGGAGATGAAACAAAAGGTAAAACAGAGAAAGAGTGTCAGCTTATAGAGTTTGTGAAAAGTTATGAAGGTGAGGAGGACTACGATGTAACACTAACTGAGTTAATTGTATTAGAAAAATGTTTCTTTGATTATATATCTCAAGAGTTGTCTGACAACAAGGCACATATAGTTCATGCACTCTCTGATATTGACTACGAGAAGTCAACAGCTGACTTAACTATGGATATAGTTTGCTCTCTATGCAGTATGGAATACAACACTGTGCAAACATTTATAACGCATATGACAAGAATGCATTCTGTGAAATTTAAGTCAGTTTATTCATGTAGGCTTTGTGCAGCAATATTCGATAGCCACAGTGAGCTCTTCAATCATGTTAACAGGGAGTTGCGTGATTTCAAAGACCTTTGGCTGTGTCAGTTTTGTGATATGGAGTTTGAAGATCGTGAACAAACAAGAAGACATTTGTCAGAACACTGGGATTTGTTAGAATATGACAATTGTTTTAGTCCACATTTGGGCTTCAAGTGTACATATTGCCCAACTTTGTTTTGGCATGAAAAAGACAGAGAAGCTCATCAAGTTCGAGTCCATCTTTCTAGGTATAGAGGAAGTTACTATAAGTGTGAAATATGCAGTGAGGTGTTCAGCGATAAGGTTTGGTTCAACTACCACTTCCTATCAAATCATGCTACCGCAGATAAAGTTCCTTTGTACCTCATGAAGTGTTGTATATGTAGTTTGGTACTCGCAAATGTGGACAATATGAGGGCCCATTTTAAATCTGAACATCCAGAAGCAAAGAAATTGTATTGCTCTTTGGATGCTTGCAAATTTAAACCATTGAGTCACAGGAAGAGCTTCAAACTTCATGTGCGGTCTATCCACAACCCACGCCATCGTGTTGAACGCAAATTAGCCTGCAACATATGTGGCCGGGAGTTTACGAGTTCGCGATCAGCAAGTGCTCACATGGCCCAGGCCCATGGACCTGGCAAATTCAAGTGTAAATTATGCGAGGAAGTCCTACATACCTTGGATGAGAGAAAACTTCATTATCTCATATGTCACCCTGGACAGCATCCATTCGAGTGTACAGAGTGCGGCAAGTCCTTCCAGTACAAGTCTTCATTATACATGCACAAACAAGAACACATGCCGAATAAACAGAACTACACTTGCACTTACTGTGGAAAGACTTTCTTGAAACGCGACTCGTTCCGCGAACACGTCCAAATCCACGAAGGGCCGCGTCACGCTTGCTCGTATTGCCCGATGCGGTTCGTCCAGCGCTCGAACATGTTACGTCACGAGCGACGTCACACGGGCGAGCGGCCGTACGCGTGCCCGCAATGTCCTCGCAGCTTCGCCGACAAGGGAGCTTGCAACTCACATATGAGAACCCATTCAAGAGATACATCGTATGCGTGTATGTACTGTGGGAAGACTTTTGTCCAGAAGTCCAAGCTGACATATCATATAAGAAAGCACACAGGCGAGAATTTAGAAACATGCACAGTCTGTTCGAAGTTATTTACAAGTGCCTGTTCTTTACGAGAGCATATGAAGACACACCTCGTTAAGACGAACACTGTCAAGTGCCCCTTGTGTGACCGCATGTACCCCGACGACCGCTACATGCTGCGGCACCTGCGCACGTCGCACACGCGCGCCCGCCACGCGTGCCCGCTGTGCGGCAAGATGCTCACCAGCGCCGCGGGACTCCGCCACCACGTCGTCACGCACACTACCCTCAAGAGGTTCAGGTGCAAATTATGTCCAAAGGTGTGCTCCGTGAAAAGAACTATTTTGAAGCACTTCCGCAGACGACACGGTTTTAAAGGAGGCGAACCTAATGTAAAAGACTTTTACACAAGACTGGAACCGAGAGAGTGCAACCTTGGCCTCGACGAAGATGTCATGACCAGCATATTTGGACCCCCAAAGAAACCAGGCAGTGATTTGCTAATTGGAGACTACGTGACTTATGCTAACTTTGGCCAACAGAATAAAGATCAAGAGGGACAGGCAAGGTCTAACCAAGACATGGATGATGACGATGATGATGATGAAGACGATGAACAAAATGATGGTAAATCAGATTCCGAAGATTCACGAGGCAGTGAGAAGGACAATAGGAATTCTGACAGTGATGCAGAGCGTGATGTTAAGACACATATAGTGAAAATTGAAACTAAAGATTATAGTGATCAGGGGGAAAATGATTTGGAACCAACTGACTTTGTCAGTGTTAAAATTGAGCCTATGGATGATGAAGATATGCACGACAATTAA
Protein Sequence: MTSDESDDEPLSVIAANKKLHPEAFIEKSEISSSKKVVKKKKKKVPPKRLPITINIQKPDLPPVIERPADVWLYLKDFNPGGPYSCLLCPEWFINRSKIILHYILNHKKDFCGICRYFVADRESWQSHVQFHTPWPCSQCIENFPTEPILRLHLKTVHKLVHCRLCHFRVSDGELYNSHLFQKHNVSSVANVDDENLWSYDDDGSTVFSCVLCSKTDNASRLFFNHYMGYHHFTLKCFSSILACKDDVPFVVRGADVRNEFIEEQLKRHPRYGYVDLELKVGNSSGSNVSDSKALLPSIKHENGSGDETKGKTEKECQLIEFVKSYEGEEDYDVTLTELIVLEKCFFDYISQELSDNKAHIVHALSDIDYEKSTADLTMDIVCSLCSMEYNTVQTFITHMTRMHSVKFKSVYSCRLCAAIFDSHSELFNHVNRELRDFKDLWLCQFCDMEFEDREQTRRHLSEHWDLLEYDNCFSPHLGFKCTYCPTLFWHEKDREAHQVRVHLSRYRGSYYKCEICSEVFSDKVWFNYHFLSNHATADKVPLYLMKCCICSLVLANVDNMRAHFKSEHPEAKKLYCSLDACKFKPLSHRKSFKLHVRSIHNPRHRVERKLACNICGREFTSSRSASAHMAQAHGPGKFKCKLCEEVLHTLDERKLHYLICHPGQHPFECTECGKSFQYKSSLYMHKQEHMPNKQNYTCTYCGKTFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPQCPRSFADKGACNSHMRTHSRDTSYACMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKTHLVKTNTVKCPLCDRMYPDDRYMLRHLRTSHTRARHACPLCGKMLTSAAGLRHHVVTHTTLKRFRCKLCPKVCSVKRTILKHFRRRHGFKGGEPNVKDFYTRLEPRECNLGLDEDVMTSIFGPPKKPGSDLLIGDYVTYANFGQQNKDQEGQARSNQDMDDDDDDDEDDEQNDGKSDSEDSRGSEKDNRNSDSDAERDVKTHIVKIETKDYSDQGENDLEPTDFVSVKIEPMDDEDMHDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441828;
90% Identity: iTF_00823335;
80% Identity: -