Basic Information

Insect: Phragmatobia fuliginosa
Gene Symbol: Znf296
Assembly: GCA_932526455.1
Location: CAKOBD010000174.1:960691-989921[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.5 5.8e+02 2.0 0.2 3 18 64 79 62 79 0.85

2 13 0.0073 0.65 11.3 1.3 2 22 158 178 158 178 0.94

3 13 0.026 2.3 9.5 3.3 2 20 192 209 192 213 0.94

4 13 0.036 3.2 9.1 0.1 2 23 251 272 250 272 0.95

5 13 0.031 2.7 9.3 0.1 2 20 373 391 372 393 0.92

6 13 2e-05 0.0018 19.3 0.7 1 23 401 424 401 424 0.98

7 13 0.00023 0.02 16.0 4.5 1 23 445 467 445 467 0.98

8 13 4.2e-05 0.0037 18.3 3.7 1 23 474 496 474 496 0.98

9 13 4.7e-08 4.2e-06 27.6 0.7 3 23 510 530 509 530 0.98

10 13 2.7e-05 0.0024 18.9 3.2 1 23 536 558 536 558 0.99

11 13 1.2e-06 0.0001 23.2 1.9 2 23 565 586 564 586 0.96

12 13 1.4e-07 1.2e-05 26.1 1.5 1 23 592 614 592 614 0.99

13 13 0.0034 0.3 12.3 0.1 1 23 620 642 620 642 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.5	5.8e+02	2.0	0.2	3	18	64	79	62	79	0.85
2	13	0.0073	0.65	11.3	1.3	2	22	158	178	158	178	0.94
3	13	0.026	2.3	9.5	3.3	2	20	192	209	192	213	0.94
4	13	0.036	3.2	9.1	0.1	2	23	251	272	250	272	0.95
5	13	0.031	2.7	9.3	0.1	2	20	373	391	372	393	0.92
6	13	2e-05	0.0018	19.3	0.7	1	23	401	424	401	424	0.98
7	13	0.00023	0.02	16.0	4.5	1	23	445	467	445	467	0.98
8	13	4.2e-05	0.0037	18.3	3.7	1	23	474	496	474	496	0.98
9	13	4.7e-08	4.2e-06	27.6	0.7	3	23	510	530	509	530	0.98
10	13	2.7e-05	0.0024	18.9	3.2	1	23	536	558	536	558	0.99
11	13	1.2e-06	0.0001	23.2	1.9	2	23	565	586	564	586	0.96
12	13	1.4e-07	1.2e-05	26.1	1.5	1	23	592	614	592	614	0.99
13	13	0.0034	0.3	12.3	0.1	1	23	620	642	620	642	0.97

Sequence Information

Coding Sequence: ATGGCTACAGTGAAAAAGAAATCAGTAATACAGATTAAAAGTGAACAATTGTGTAGAACCTGTCTATCAAAAGAGAATGAGCAGTATTCAGTTTTTGATATATATATTGGAACTATCACAATAGATTATATAGTTACTTCTATAACTGGACTTAAGATATTTAAGGATGATGGGTTACCATCTACAATTTGTCATGAATGCAAGGAGAAAGCGGCTAATGCTTACGAATTTAAGAAGAAATCAGAAGAAGCGTATATATCTCTGCAAGACACAATTAAAAATGAAAAAAAAGACTGGTCAACAGCAGCTAAGCCAGACAGCCTAATGGGAGTCAAGATTGAGGATATTCTACTAAATGATCATGATGACTATACTGATGGTGATTACAGCATGTCCCTTAGTAGTGGAACAGACTTAAATGATTTGGATGCAGTTAAAAGTGAAAGTGAGCAACAAAATAAAACATCTAATGAATGTAAAAAATGTTCATTAAATTTTAAAACACAAAATGAATATGAAGATCACCAAAAGAAAAAATGCGTTAGAATTGAATGTGATGATTCAAATGGCAACTATTGTCCACTATGTGGTAGATGTTACGATGAGGATAGTTTGACTAAACATATGTGGAACTGTCATTCAGATGTTATGGGTCCAAAGAAAAGAGGCAGGCCGAAAAAAATATTGACAAGTACAATAATTGACAAGTTATCAGAAAACGGATTTTTTATCACATCTTTGAAAAAGATCGAATGCCTATTTTGTAAAGAGTATTTTGACACCAAAGAAGATTTAGGAATTCACTTGCTAAATCATAAAGATATGAATATATTATGTTGCGAAATATGTAAAAAGATGTACCTGGAAAAAAAGAATATGGATCAACACAGTTGCAGTCAACGAAAAGTTGGTGTAAATGATCTGACAAGAACAGAAGGAGTCGAATTAAAACATTTTAGCTACTATTCAGAAATAAAATTACAAGAACTTATGGAATCCAACACTGATGTGGAAAAAATCACATTACTGCAAATATGTAGTGCATGCGGTTGTGTATTTTTATTTGAAAAAGATCTCATTCACCATCACGATAGTGAACATCCGGAACTGTCCATGCGTTGTAATTTCTGTACGAAGGTGTTTGCTACTTTGAGGTCGGCTGCTCGTCATAGAGGTGTTTGTAAGGAAATTGAAAGAAAATATAAATGTACCACCTGTGGACTAACATTTGCATATGAAATATCGCTAAATAAACATATTTTAAGGTATCACAAGGGTCAAAGTGTGTCTGTCAAATTTATCGACACGAAAACTAAACGTGATGAGAGGCAATTCCAATGTGATACTTGCAGTAGGTGTTTCTATAAGAGAGATTTATTAGTTAGACATACCAAAATACACATGCCCAACGAAAAATCTTTTGAATGCGATATTTGTAAAAAACTATTTCATAGAAGAGATAATCTACGATCTCACAAGCGGGTACATGAGGTGGCGCGCGATAAAGGTTCTCCAAGCACATCGTTATGCTTATACTGTGGCCGTAGTTTCTCCAATTCATCCAATTTGATAGTACACATGCGCCGTCACACCGGAGAGAAACCTTACAAATGTGATTTTTGTGGCAAAGGTTTCCCAAGATCATCAGACTTACAATGCCACCGAAGATCACATACCGGTGAAAAACCTTGCATATGCCTAGTTTGTGGCAAAGctTTTTCGCGCAGCAACAAGTTGTCCCGTCATATGCGAGTCCACACGGGGCAAAGACCGTACAAGTGTACGTATTGCGAAAAGGCATTTTCGCAGAGTAACGACTTGACTTTGCATATTAGGAGGCACACTGGTGACAGGCCTTACATATGTGAAGTTTGTGGAGATAGATTTATCCAGGGAACGGCATTACAGAATCATAGGCGAGCTCACGGCCACTTTCCACCAACGTCGGCCGAGACTCCTACCGTCGTTCAATCTCTCAGTTATGCGGTTCCAACCGTTAGCCATAGTAGTCACTAA
Protein Sequence: MATVKKKSVIQIKSEQLCRTCLSKENEQYSVFDIYIGTITIDYIVTSITGLKIFKDDGLPSTICHECKEKAANAYEFKKKSEEAYISLQDTIKNEKKDWSTAAKPDSLMGVKIEDILLNDHDDYTDGDYSMSLSSGTDLNDLDAVKSESEQQNKTSNECKKCSLNFKTQNEYEDHQKKKCVRIECDDSNGNYCPLCGRCYDEDSLTKHMWNCHSDVMGPKKRGRPKKILTSTIIDKLSENGFFITSLKKIECLFCKEYFDTKEDLGIHLLNHKDMNILCCEICKKMYLEKKNMDQHSCSQRKVGVNDLTRTEGVELKHFSYYSEIKLQELMESNTDVEKITLLQICSACGCVFLFEKDLIHHHDSEHPELSMRCNFCTKVFATLRSAARHRGVCKEIERKYKCTTCGLTFAYEISLNKHILRYHKGQSVSVKFIDTKTKRDERQFQCDTCSRCFYKRDLLVRHTKIHMPNEKSFECDICKKLFHRRDNLRSHKRVHEVARDKGSPSTSLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICLVCGKAFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLTLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPPTSAETPTVVQSLSYAVPTVSHSSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00157424; iTF_00823284; iTF_00824086;
90% Identity: iTF_00824086;
80% Identity: -