Pful026523.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- ZNF296
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000160.1:283397-299376[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.21 19 6.7 0.2 3 23 122 142 120 142 0.96 2 13 0.0019 0.17 13.1 2.8 1 23 288 310 288 310 0.99 3 13 1.5e-05 0.0013 19.7 0.8 1 23 316 339 316 339 0.97 4 13 0.002 0.18 13.1 2.5 1 23 344 367 344 367 0.94 5 13 4.6e-05 0.0041 18.2 0.4 2 23 530 551 529 551 0.98 6 13 2.4e-05 0.0021 19.1 1.4 1 23 557 579 557 579 0.98 7 13 0.00083 0.074 14.2 2.0 1 23 697 719 697 719 0.95 8 13 0.00032 0.029 15.5 0.9 1 23 725 747 725 747 0.98 9 13 0.00088 0.078 14.2 2.0 1 23 756 778 756 778 0.98 10 13 3.7e-05 0.0033 18.5 1.3 2 23 825 846 825 846 0.97 11 13 0.0037 0.33 12.2 3.2 1 23 863 885 863 885 0.96 12 13 1.5e-06 0.00014 22.8 1.0 1 23 891 913 891 913 0.98 13 13 1.7e-07 1.5e-05 25.8 3.1 1 23 919 942 919 942 0.98
Sequence Information
- Coding Sequence
- ATGAACAACGGCATGGACTTGGACCCACTAAGCACATACGAATACACTACATACAATAGTTACCATTCTTTAAACAATGCCCAAACGAACAACCTCCCACCGTACCCATACCAACATGTTAAACAAGAAGAAACATACTACAACCAACCGATACATAACAACACTGCAACAACAGCTTATAACACCAACAACATACCAGAAACCTTACCTCAGAACGAACAACCACCAGAAATGTATAAACCAGAACAGCCGAACGAAGAAATTGAAGTCAAACCAGATATAACTAAAAAGACGAAAGATAAAAAGAACGGGAAGAACTACTGCTCACAGAAAATAAATGATGCATCATATCCATTCTACGGCTGTTCCGTCTGCAACATCAGTTACACAGCATTACACGAACTGGACCAGCATGTCACCGTACACAAAAACAGAATGACAAGTTACAGGTTAAGATTAAGAAATCAGTATAAGAAGAAGCAAATAAAGAAGGAAAAGAAGAAACTGAAGAAATTGAAGAAGATAAAACAGGAGACTGAAGTGGACATTGAAATAAAACCAGAAGATGGCTACATTGGGAGTGAAATAGCTACAGATTATGTCGATAATGAAGCAAATAATATTACAGATACAAAAGTAGATGAAATTAATTCTGACTGTAAAGATTTAAGTAAACTTGATGAAAATAATGGTGATTTAAATAAAGTAGATGAAAATAATGGTGATTTAAGTAAAGTAAATGAAAATAATGGTGATTTAAGTAAAGTAGATGAAAGTAATGGTGCTGTAAGCAGTCAGGAGAGTTATAAGAGCAACGATAAGGATGCTGACGAAGCTGAATTGAATAATTTAGAGAAAATTTATAAATGTTTTGCGTGTCAGAAACAATTTACGTTAAGTTATTATTTAAAGTTGCATGTTAGATCTCATACAGATGAAAAACCTTACAAATGCAACATGTGCGGTCAGTCGTTCATAACGGCGAGCAAACTCGGGAGGCACAACAAGCGAATACACCTCGCTGCCAGATTCCAGTGTCGAATATGCTTTAAAATATTTTCTAGGTTTGAGTTGCTGACCAATCACTTTGATAAGAATCATCCTGAAGACAAATTAGACGGGGAACCATATGattACAACGCAATTCTGCCATATCTGAAAGAACTAGAAGAACAACTGAAGGAGCAAGCAGAAGCTAAAGAACAGAAGAAAGAAGAGACCTGGTTCGAAGTGGCCATCGCGCCTGACGCCGAGGGAGTCAAGAAAGAGGAACAAGAAGAAGAAGAGAAACTGTTACCCAAGATAGACATAATTGTAGAAGAATTCAAAGTGGACACTTTCGAGGACGTTAAGGTAAAGCAAGAGATAGAAGATAATGAAGGTGAGAACAAACCACCGGAGGAGATGCCTGGAGACGACTTTAGAAACGATGATGATAATGAGGACGTTAAACACGAAGACTTTAAAGATGACAGCCCTTCCGATGACGACTACTTCCCCTCCAACACGTGGGCTTCAACCCCCAAATGCGACCCATCACCTCCCCCGTCACCAAAACCGAAGAAATCAGCGATAACGAAGACCAGCACCTGTGAGATTTGCAACAAGGAGATCAGTTCAGCGTCGTACATGAGGGTGCACATGCGGACCCACACTGGAGAGAAACCGTTCAAGTGTTACACGTGTGGGAGGGGCTTTATCACGAGCAGCAAGATGAACAGGCACGTGCTCACGCATGGGAACGATGCTAAAGAAGAAGATATCAAACAAGAAGATGCAGAAGTGAAAGAAGAAGGAGAAGAGCCAACAGAAGACGAAAGCAGTGGTTCAATAAAGAAAAAAAAGAAGAAACGTAAGTTAACCAAGACGTCGGAGCTGGGAGAAGAGAAAGTGAGGAAGAAACATCAGAAGAGACCGCACTCCTGTGAATACTGCAATCAGAAGTTCCTGCACCTGAAGATGCTGGAAGTGCACAAAAAGTGCCACGAGGGTCAAGAGCTGGTGCTGAAGTGCCAGTTTTGCCTGGAGGAAGTCTTGGACAACGACGCTCTCAAGGACCACGAGGCATCGCACTCGGGACCGAAGCCCTACCTCTGCACCATCTGTGGGAAGACTTACAAGAAGAGGGAGACTATGATATACCACCGCAAGCAGCACCAGCCCGAGAAGGAGTACGTGTGCGACGTGTGCTCGAAGCGGTTCACTGCGGCCTGCAAGCTGGCCAAGCACCTcgccacgcaccgcgagggcggcttcgtgctgcgctacgagtgtcccgtctgcgcgcacatgttcaacacgcgctaccacgtgcagatgcacctcgccacgcaccagaaggaggggctGATTCTGGAATCAAACCGCAACGAAGTGTTAGCGATGGTGCTTCAAAACGCGCTCAAGATCCCCAAGCAGCCCGACGCGGCCTCCACCTTGTCGGACATCACTCCTGCGGACGAGAGATACAGAGTGTGCAAGATCTGCGGCGAGACCTTCAACCACTTCTACTACCTGGAGGAACACCTCAAGAGTCACGGCTCCAAGATCGCCATCGACGACACCAATAAGGCTGAGGAGAAGAAGTACATCTGCGAGATCTGTAACAAGGGCTTCAAGCTACATTATTATCTGAAGCTGCACAGCTTCACCCACTCCAAAGAGAAGCCCTTCATGTGCCAGCAGTGCGGGAAGGGGTTCATCACCAAAGGGAAGCTCAAGAGACACTTGGAGACACATTCTGGACTCAAGAAGTACCAGTGCCACATATGCTATAAGTTCTTCACCAGACCCAGTTATTTAAGGATCCACATCCGAACGATTCACGGAACCCAGGACTACAACTATCGTTTCGATAAGTCCCTCACGCTATCTGCCATCTCGGCTCTCGCTCACATATCTGACAGTCAGAACACAACGTGA
- Protein Sequence
- MNNGMDLDPLSTYEYTTYNSYHSLNNAQTNNLPPYPYQHVKQEETYYNQPIHNNTATTAYNTNNIPETLPQNEQPPEMYKPEQPNEEIEVKPDITKKTKDKKNGKNYCSQKINDASYPFYGCSVCNISYTALHELDQHVTVHKNRMTSYRLRLRNQYKKKQIKKEKKKLKKLKKIKQETEVDIEIKPEDGYIGSEIATDYVDNEANNITDTKVDEINSDCKDLSKLDENNGDLNKVDENNGDLSKVNENNGDLSKVDESNGAVSSQESYKSNDKDADEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYKCNMCGQSFITASKLGRHNKRIHLAARFQCRICFKIFSRFELLTNHFDKNHPEDKLDGEPYDYNAILPYLKELEEQLKEQAEAKEQKKEETWFEVAIAPDAEGVKKEEQEEEEKLLPKIDIIVEEFKVDTFEDVKVKQEIEDNEGENKPPEEMPGDDFRNDDDNEDVKHEDFKDDSPSDDDYFPSNTWASTPKCDPSPPPSPKPKKSAITKTSTCEICNKEISSASYMRVHMRTHTGEKPFKCYTCGRGFITSSKMNRHVLTHGNDAKEEDIKQEDAEVKEEGEEPTEDESSGSIKKKKKKRKLTKTSELGEEKVRKKHQKRPHSCEYCNQKFLHLKMLEVHKKCHEGQELVLKCQFCLEEVLDNDALKDHEASHSGPKPYLCTICGKTYKKRETMIYHRKQHQPEKEYVCDVCSKRFTAACKLAKHLATHREGGFVLRYECPVCAHMFNTRYHVQMHLATHQKEGLILESNRNEVLAMVLQNALKIPKQPDAASTLSDITPADERYRVCKICGETFNHFYYLEEHLKSHGSKIAIDDTNKAEEKKYICEICNKGFKLHYYLKLHSFTHSKEKPFMCQQCGKGFITKGKLKRHLETHSGLKKYQCHICYKFFTRPSYLRIHIRTIHGTQDYNYRFDKSLTLSAISALAHISDSQNTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157427;
- 90% Identity
- -
- 80% Identity
- -