Pful025644.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phragmatobia fuliginosa
Gene Symbol
Prdm14
Assembly
GCA_932526455.1
Location
CAKOBD010000150.1:1489933-1501632[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 5.3e-07 4.7e-05 24.3 0.5 1 23 451 473 451 473 0.98
2 14 0.099 8.8 7.7 4.0 1 23 479 502 479 502 0.96
3 14 7.9e-06 0.0007 20.6 0.9 1 23 508 530 508 530 0.98
4 14 3.3e-06 0.00029 21.8 3.1 1 23 535 557 535 557 0.99
5 14 1.3e-05 0.0011 19.9 3.7 1 23 563 585 563 585 0.99
6 14 1.1e-06 9.9e-05 23.3 1.1 1 23 591 614 591 614 0.95
7 14 4.9e-05 0.0043 18.1 2.9 1 23 620 642 620 642 0.97
8 14 2.4e-05 0.0021 19.1 0.8 1 23 648 670 648 670 0.98
9 14 6.8e-05 0.006 17.7 2.1 1 23 676 698 676 698 0.99
10 14 1.2e-07 1e-05 26.4 0.7 1 23 704 726 704 726 0.98
11 14 2.8e-06 0.00025 22.0 3.5 1 23 732 754 732 754 0.98
12 14 0.064 5.7 8.3 2.3 1 23 760 779 760 779 0.95
13 14 2e-06 0.00018 22.5 0.8 1 23 785 807 785 807 0.98
14 14 0.00093 0.083 14.1 3.5 1 23 813 835 813 835 0.98

Sequence Information

Coding Sequence
ATGTCTTTTATATTTGATGTAAATAACTTATGCCGGTGTTGTCATGCACAAGGGAATTTTAAAAGCATTAATGGATGGACGTCTGAAAATATTCAAGATGAATATTGTTTATTGCTGAAAGATACATTTAATGTTAATATCTCCCCTGTACCCCAAGATGTTGGTGTATCTTATAGTATTTGTGAAATATGTGAGCCAAGACTCAGAGATGCTGCACTATTTAAAAAACAAGTGTTGTCATGTGAGGACAAGTTGAAACAGTATCTGTACGACAATTATCAGTTCAAAGATGTAGTGGCTTTGGAGAAAGAAGTTAAAAAGGAATTAGGACAAGATGggggggatccccaaactccctcgtccatacgggagagagcgacagcagcggtggccgtcatcaacaaggtggccactaagtcgagcaaccttaagggttcctttgtcaaggccctTAAGGACTCGTCTTCCGCTATTGCGGGTGTTGTGGATACCCTAATCGGAGACGTGGCTCGTCTCCAGGCGGCCAACGACCGCTTGACGGCCCAGGTGACTGAGCTTAGCGCTCAGTTCGCCGAATTTCGGGCTGAGCGGCCTCAAAGAGGGGCCTTGCCTGGCCCGTTGCAACCGGCTCCTGCCAGGGTCGAGGTACCTGACGCCCAGCTACGCCAGGTCCTCCAAGCAGTGGAGCATATGCTGGACGGGCGTCTGGCCGGTCTGGAGGCGAGACTGCCCCCTGCGCCGGTCATGCGCCCCCCGCTCGCGTCGCAGCGACCGAAGGCTGCGACACCGCCGACCGCACCCGCTGTGTCGTATGCGGTGGCGGCGGCTTCAGCTCCGGCCCCTGCGGCTCCCAAAAGAGCGGGGAAGGGGGCCAAGGCGCCGGCGAAGGCCCCGGCTAAGGCGCCGGCCCAGGCACCGGCCAAGGCGCCGGCCAAGGCGGTGCCTGAAACGGCGGAGAAGTCCGGAGCGGAGTTCCCTCCGCTCCCCACTCCACCATCTCAGCCGGGCCCCTCCACATCTGcctccgatgaccgttggcagATGATAGCGATTACTGAACGAAACGTTAGCCTCTTGGCTGGGGAGACCCCCCACACTATCTGTGAATCTTGCTGGAATGCAACTCCGCTCCCGCTGTCCCTCTCACCTCTCCGCTCTCGCCCTAAGCCCAAGCTCCTCCAATTTGAGGATGACGACCAGCCACTGTCTACATTACGTAGCTCAAAGGTCTTGGAGTATGAACAGTTGGAAGTACACGATGAGCCTGCTGTGGACGATGAGGATTGGAGGACACCAGATTTAAGTGATGAGGACGACCTCAAAGAAAAAAAACCAAAAAAATTAAAAAAATATTCCTGTGAAATTTGCCAAAAGAAATTCTCCTACAACGGTTCTTTGGAAGTCCACATGAAGGTCCACAGTGGGGAGAAATCGTTCACGTGTCACCTATGTAACAGTTCGCACACAGAcaacaaagaattaaccaaacacattacgataatgcacatagtagataaccaatatccctgcacccaatgtgaaaagatcttcgaaaaagccagactgctcaaaaagcatataaaaacgcattacagcgaaaaattcaagtgtactgaatgtcaaaaagaattccaacgaaaaaagggcttgaaagaacatatgaaaacacacactggggagagaaagtatacttgcgatgtttgtaataaatcattcggacataaccagacgttaaaatctcatatgttcacgcacacaggagaaagaccatacgtatgtgatgtctgcggtagaagattcccccaaagaacacatctcaaaagacacatattcataatccacgctggaataaaaccccacagttgtaacgtctgcaaaaaacaattctccagcaaaagttatctggcaatacatgagagacaacatactggggaaagaccatattcttgcgaagtctgtaaaaaagattttactgcatacacaactttgaaagtccacatgagggtacacacaggttttaagccgtacacttgcagcttttgcgatagacaattcgcccaaatggccagttttaaattacatcaaaggacacatacgggcgaaaggccgttttcctgcaaaatttgcaagaaacctttctctgataatgggtatttgaagattcatatgcgtgtacattctggggagaagccgttttcttgcgagatttgcaagagatgttttagggagactggtcagttgaagagacatatgcgcgtacacacgggtgtaaaaccctacacgtgtaaaatctgtaataagcagattggtaatttatctaaacatatgagggtacattctgaacagagaccttttagttgtactgtatgtaataagcagttttctataaatggtaatttgaaattgcatatgagggtacacactggcgaaagaccgttcagttgcgacttgtgcagtagccagtttacacaaagtagtggtttgaagagacaccggtgtgttcatggtggtaaaAGTGATAGTTAA
Protein Sequence
MSFIFDVNNLCRCCHAQGNFKSINGWTSENIQDEYCLLLKDTFNVNISPVPQDVGVSYSICEICEPRLRDAALFKKQVLSCEDKLKQYLYDNYQFKDVVALEKEVKKELGQDGGDPQTPSSIRERATAAVAVINKVATKSSNLKGSFVKALKDSSSAIAGVVDTLIGDVARLQAANDRLTAQVTELSAQFAEFRAERPQRGALPGPLQPAPARVEVPDAQLRQVLQAVEHMLDGRLAGLEARLPPAPVMRPPLASQRPKAATPPTAPAVSYAVAAASAPAPAAPKRAGKGAKAPAKAPAKAPAQAPAKAPAKAVPETAEKSGAEFPPLPTPPSQPGPSTSASDDRWQMIAITERNVSLLAGETPHTICESCWNATPLPLSLSPLRSRPKPKLLQFEDDDQPLSTLRSSKVLEYEQLEVHDEPAVDDEDWRTPDLSDEDDLKEKKPKKLKKYSCEICQKKFSYNGSLEVHMKVHSGEKSFTCHLCNSSHTDNKELTKHITIMHIVDNQYPCTQCEKIFEKARLLKKHIKTHYSEKFKCTECQKEFQRKKGLKEHMKTHTGERKYTCDVCNKSFGHNQTLKSHMFTHTGERPYVCDVCGRRFPQRTHLKRHIFIIHAGIKPHSCNVCKKQFSSKSYLAIHERQHTGERPYSCEVCKKDFTAYTTLKVHMRVHTGFKPYTCSFCDRQFAQMASFKLHQRTHTGERPFSCKICKKPFSDNGYLKIHMRVHSGEKPFSCEICKRCFRETGQLKRHMRVHTGVKPYTCKICNKQIGNLSKHMRVHSEQRPFSCTVCNKQFSINGNLKLHMRVHTGERPFSCDLCSSQFTQSSGLKRHRCVHGGKSDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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