Pful023317.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- Zfy1
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000130.1:775320-782272[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.088 7.8 7.9 0.2 3 23 144 165 142 165 0.91 2 23 9.5e-06 0.00084 20.4 0.8 2 23 188 209 188 209 0.97 3 23 1.9 1.6e+02 3.7 4.6 1 23 330 352 330 352 0.97 4 23 0.00059 0.053 14.7 2.0 2 23 359 381 358 381 0.92 5 23 6.1e-06 0.00054 21.0 1.4 1 23 387 409 387 409 0.98 6 23 1.8e-06 0.00016 22.6 4.4 1 23 415 437 415 437 0.98 7 23 0.0003 0.027 15.6 0.3 1 23 443 465 443 465 0.98 8 23 0.00018 0.016 16.3 3.3 1 23 471 493 471 493 0.96 9 23 1.1e-05 0.00095 20.2 1.9 1 23 499 522 499 522 0.97 10 23 6.5 5.8e+02 2.0 0.8 3 23 564 583 564 583 0.86 11 23 2.3e-06 0.0002 22.3 0.2 1 23 589 612 589 612 0.96 12 23 1.4e-05 0.0013 19.8 1.0 1 23 618 640 618 640 0.98 13 23 0.00021 0.019 16.1 0.0 1 23 646 668 646 668 0.98 14 23 0.059 5.2 8.4 0.1 3 23 675 695 673 695 0.90 15 23 0.00042 0.038 15.2 0.8 6 23 705 722 704 722 0.99 16 23 1.2 1.1e+02 4.3 0.1 2 23 782 803 781 803 0.93 17 23 0.51 46 5.5 4.9 1 23 808 829 808 829 0.96 18 23 0.0087 0.77 11.0 1.9 2 23 1095 1117 1095 1117 0.95 19 23 3.8e-05 0.0034 18.5 0.5 1 23 1123 1145 1123 1145 0.98 20 23 8.4e-05 0.0075 17.4 3.9 1 23 1151 1173 1151 1173 0.98 21 23 0.0021 0.19 13.0 8.9 1 23 1179 1201 1179 1201 0.98 22 23 0.00018 0.016 16.3 4.6 1 23 1207 1229 1207 1229 0.98 23 23 6.1e-05 0.0054 17.8 0.6 1 23 1234 1257 1234 1257 0.96
Sequence Information
- Coding Sequence
- ATGAATAACGGTACTGAACAAGTATATTTAATTAATTCTATACAAAGTCATCCACTAGGTGTACAACAAAAGCAGTTAACACAAGGAACCACACCGGTCAATCTTGAAAATGTGGAAAATTTCTCAAATGTGTGTCGGACATGTGCCACTATCACACAACTTGTCATCCCCATATTTACCGGGGAGGGGCTGGAGCATCACTTGGCTGAGAAAATACACAAACACTTGCCTATAACGGTGTCCGAGACAGATCTCTTACCTTTAGTGGTGTGCTATCAATGTGTGAGCACACTGCTAGCTTGGCATGAGCTAGTGGAATGCTGTTTGCAGGCTGATCGAGCCCTCAAAGCTAAGATTGGTGTAGATTCCAGTACTGAAACTCAAAAGGAACATCATGTCGAAAGAAAGAAAGACAGTCTGGAGAAAGTGTGCAAGTGTTGTGGTTTAGAAGTAAAAGATGCGAGTGAACTCCAAGCTCATATAAGCGAGGTACATCAAAAGAAGAAGGTGTGTAAAACAAAGACACTTCAGAGTCCAAAGAACCAGAAATATATCCCAGCAGTTTGTCCAGAATGTAATAAAACGTTTGCCAATAAATACAGCATGTTTCTACATATGAAAAACCACAGCGCTGAAGTGCGTACGTTTTCATGCGATAAGGACGACTCCCAGTTCCTGGATGCGTCAGAATCTTCAGATCGATCAGATGATAAGCCGCTTTCTACATTAACTACTAAAAACCCTGAGGGTCTGTACGGCGAGTTTTATAGAGCCCTCGTTAACTTCAAAAATCATTTTGTCGAAGAACATGACAATCCCGAGTCTTATCCCGATTTTACTGACTCCTCTAGTGCATCAGAAGTTGAAGAAAACAGTATAGACGGTTACGACGACCTAACCCAGTGTAACATGAGAAAAGATATAATGGATAAGGAGACCAGATTGGAACTTAATCAGGCTCAAACTAAGATTAATGGAAAAGTGTTCTATACGTGTAGAATCTGCAGTAAGAACTTAAGCTCGTCACACACGTATATGTTTCATAAAAGAATACATACCGGCGAGAGACCCTGCGTGTGTCACGTATGTGGTAAACAATTCCGAGCACCGAACGGATTGCAACGACATCTGACGGAAACGCACGAACGCTTACGAAGATACAACTGCAGTTTATGTTCAAAAAACTTCGCCAACTCACAGAATTTGAAGCAACATTTGAGGATACACACCGGCGAGAGACCGTTCGTGTGCTCGCACTGTGGCAAAAGATTCACCCAGAGCGGTTCGCTGCACGTGCATTTAAAAACGCATAGTGAACAGTTTCCGTATAACTGCGCCGAGTGCGGGGCGAAATTCCGACTGCGATCCGGTCTAGCGAGGCACAGGCTTAAACACACGGGCGAACGACCGCACGTCTGCTCTCTCTGCGGGAAAGGATTTCGACAACGACACGAATTAAACTCTCACAGTCTGTCCCATTCCGACGCCAAGCCCTTCTCCTGCACGATCTGCGGGACGGCGTTCCGTCAACGACGAGCTCTCCGTCATCACGTAAAACGAATCCACGAAAACGAGAGGCTCGTGGAGGTAAAAATCGAGGTACGCGACGGCGACGGCGCCAAAGCGGCGGAAACAAATATACCACCGGCGGCCGGAACGATCGCCTCCGACTCGCGGAGGACCGTGTGGTGCGAGAAGTGCAATAAAAGCGTATCGGTGGTATCTCGGCGGCGACACGAGCGGTTGCACGACGGCGAGAAGCGGTACAGCTGCCACACGTGCGGGCGCGCGTTTGCCGACAGCGGGAACCTCGCGCGCCACGCTCGGGCGCTGCACGCGCGACAACGGCCCTTCTCGTGCTCGATATGCGCGAAGGCGTTCTCCCGGCGGGCGCACCTGGAAGACCACGAGCGATCGCACTCGGAGCGGCGCGACTTCGTGTGCGAGTGGTGCGGCGCGGCGTCCAAGTCGCGCGCGGCGCTGCGCATGCACTTGCGCACGCACGCGGCCCGCGCGCTGCGCTGCGTGCCGTGCGGCGCGCTGTTCCGTCGCGCGGCCGAACTGCGCGCGCACCGCTCGGTGCACTCGGGCGAGCGCGCGCACGCCTGCGCCTGCGGCCGCGCCTTCCGCCTGCGCACGCAGCTCACGCGCCACCAGCGCACGCACCGCGCCGACCCGCACTCGCCCGACGACTGCGCCGCTCTTAACCCTAGTGATCGAATACATCCACCTATAAATACCTACCTATGTTTTTTATTAACGTTGAACAGGATCAATAACTATGTAAGACTACCGGATCCGCAGAAATTTGGCGATCCCCCTGAATACACCGTACCACACCAGGTATGCGATTTCTGCAACATAGCATTTCCTGAAGACACTTTCATTAAGCATCTCATTGTCGAACATTCTGAATTGCTCTTTCATTGTGAACATTGCGACAAATATCTCAATAGACGTCAATTTATAGCACACATGTCACTCCATGCGGTGCAGTACACGGACCGATCAGAACTAGAAAAGAGTATGAGAGGAGAAAATGACGGAACGCAAAACAATAATACTATGACTCCAGTTCTTAACCATGAGGCTGATGGATGTGCAGAAACAAGAAATGACCAAAGTTTATCTGACACTGAGCAATCCAATATATCAATAATGAGTAATGAAAGTGTTACTATAACCCCAACTATGATTCCTCACGATAATACAAGTGTCGCTACACCAACTGCCAACTACAATTCCAACACTGCAGAGATAGTAACAAGTAATATAATACCGACAAATTTAGTAATACCCAACAACTCTCAGCAAATTACTACTCCAACATCTGATACAGAAAGTGAAGGTGCAACAGCAGTACCAGAAAATAGTAATATGAATGCTATACAAGCCAAAAATAATCATCAAGATGATACTATTTCTACTATAGCACTCGGGCATAATCAAAATGGTGACAATGCATCAATTTCAAATGAAAATACCAAGGTTCCAGTAACGCATAGTCAAAATAGTACCACAACCAAACCAGATATGGCATCGTCGGCACAAAGTAATAAAACCCCCAGATATAGTCAAGAAAACGAATTTTCTGATCACAGTGATAATGAATATGGCTTCGGTCCCCTCCCTGAATCAGTATTTGAAGCTATTGAAGATACTCAAGATAGCCAGCAAGCTGAAGATACAACTCATACAGTAGATATTGAATACATAGACGAAGAATCTAACTCGGCAACTAAAGACTGTAATTTCAAACTACCATCATCTAAAAAATCTAGGACGTGTCCTATCTGTTCCAAAGTGTACAAAGCATCTTCTAGCTACTTCTATCACTTAAAACACACACATAAGAAAGTTAAAGAGCATGAATGCGAAATCTGTACCAAGAAATTCGCGACGAGAGCAGGTCTAGCCTCACATATCACGACTCATACGGGAGAAAGTCAATTTGAGTGTAAGCATTGCAAAAAGCGTTTTAAATCCAAAGCTGGTTTGTACATTCATGAACAAACCCATACTGGCATCAAAGCCTTTTGTTGTGAACATTGTGATACGTCGTTCCGATGGAAGACCCATTTGGAAAGACATATGAAAAGACACTCTGCGGAGAAATCTCACGTGTGTTCTGTGTGTGGTCGTGGTTTCAGCATCCATTGTGATTTACTGAGACATATGCGTACTCACACTGCAGGCGACTTTGCTTGTGAAGAATGCGATGTTAAATTTTCTCAGGTGAGGTATTTAAAAGCACATATGAACAAGAAGCACTCGAAGACAGTTGAGAAAAAATAA
- Protein Sequence
- MNNGTEQVYLINSIQSHPLGVQQKQLTQGTTPVNLENVENFSNVCRTCATITQLVIPIFTGEGLEHHLAEKIHKHLPITVSETDLLPLVVCYQCVSTLLAWHELVECCLQADRALKAKIGVDSSTETQKEHHVERKKDSLEKVCKCCGLEVKDASELQAHISEVHQKKKVCKTKTLQSPKNQKYIPAVCPECNKTFANKYSMFLHMKNHSAEVRTFSCDKDDSQFLDASESSDRSDDKPLSTLTTKNPEGLYGEFYRALVNFKNHFVEEHDNPESYPDFTDSSSASEVEENSIDGYDDLTQCNMRKDIMDKETRLELNQAQTKINGKVFYTCRICSKNLSSSHTYMFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERLRRYNCSLCSKNFANSQNLKQHLRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYNCAECGAKFRLRSGLARHRLKHTGERPHVCSLCGKGFRQRHELNSHSLSHSDAKPFSCTICGTAFRQRRALRHHVKRIHENERLVEVKIEVRDGDGAKAAETNIPPAAGTIASDSRRTVWCEKCNKSVSVVSRRRHERLHDGEKRYSCHTCGRAFADSGNLARHARALHARQRPFSCSICAKAFSRRAHLEDHERSHSERRDFVCEWCGAASKSRAALRMHLRTHAARALRCVPCGALFRRAAELRAHRSVHSGERAHACACGRAFRLRTQLTRHQRTHRADPHSPDDCAALNPSDRIHPPINTYLCFLLTLNRINNYVRLPDPQKFGDPPEYTVPHQVCDFCNIAFPEDTFIKHLIVEHSELLFHCEHCDKYLNRRQFIAHMSLHAVQYTDRSELEKSMRGENDGTQNNNTMTPVLNHEADGCAETRNDQSLSDTEQSNISIMSNESVTITPTMIPHDNTSVATPTANYNSNTAEIVTSNIIPTNLVIPNNSQQITTPTSDTESEGATAVPENSNMNAIQAKNNHQDDTISTIALGHNQNGDNASISNENTKVPVTHSQNSTTTKPDMASSAQSNKTPRYSQENEFSDHSDNEYGFGPLPESVFEAIEDTQDSQQAEDTTHTVDIEYIDEESNSATKDCNFKLPSSKKSRTCPICSKVYKASSSYFYHLKHTHKKVKEHECEICTKKFATRAGLASHITTHTGESQFECKHCKKRFKSKAGLYIHEQTHTGIKAFCCEHCDTSFRWKTHLERHMKRHSAEKSHVCSVCGRGFSIHCDLLRHMRTHTAGDFACEECDVKFSQVRYLKAHMNKKHSKTVEKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -