Pful016305.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000092.1:9172122-9172592[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-09 3.4e-06 27.4 0.0 1 38 8 46 8 51 0.90 2 2 6.7 6.5e+03 -2.3 0.0 3 10 94 101 92 102 0.80
Sequence Information
- Coding Sequence
- ATGCTTAAAATACCCCAGTATACAAAAGACGCCATTGATGAGGCACTAGAAAAAGTAAATGGTAAAACAGTGTCTTTGCGAGCGGTCGCAAAAAAATATAGTATCCCAAGGGCAACTTTACAGTTCAAACTAAAAAATCCTACTTCTAGATCTCAATTTGGGCCGACAGTATATTTAACAGATGTAAAAGAACCAGCATGGAAGTTACTAAAGCCAGCGCCTGTATTTCTAAAAGTGACAAAGAAATGGTTTCTTGAAATCAGGAATTACTTAAGCAGTGAAAACCTGTTAGAGGCAATTCGTGATCCACAGCGTGTTTCTAACGCTGATGAGACAGGATTTCAGATTTGTCCTTCTACTGGTCGGGTGCTTGCCGCTAAAGGTGTTAAAAATTTTAATGCCGTGGAAAAGAGACGAACAAGCAACCGAAAGAAATTGTCTTTAAGAAGACAAGAAAAGGTAAAGGCATAG
- Protein Sequence
- MLKIPQYTKDAIDEALEKVNGKTVSLRAVAKKYSIPRATLQFKLKNPTSRSQFGPTVYLTDVKEPAWKLLKPAPVFLKVTKKWFLEIRNYLSSENLLEAIRDPQRVSNADETGFQICPSTGRVLAAKGVKNFNAVEKRRTSNRKKLSLRRQEKVKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -